Miyakogusa Predicted Gene
- Lj0g3v0202659.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0202659.1 tr|G8A222|G8A222_MEDTR Low-temperature-induced 65
kDa protein OS=Medicago truncatula
GN=MTR_128s0016,36.65,0.000000000000008,seg,NULL;
CAP160,CAP160,CUFF.12890.1
(680 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr6g045273.1 | seed maturation protein PM39, putative | LC | ... 303 5e-82
Medtr1g100627.1 | hypothetical protein | HC | chr1:45552041-4554... 101 2e-21
Medtr1g100623.2 | hypothetical protein | LC | chr1:45546819-4554... 87 6e-17
Medtr1g100623.1 | hypothetical protein | LC | chr1:45546819-4554... 87 7e-17
Medtr1g100607.1 | hypothetical protein | LC | chr1:45530692-4552... 51 3e-06
>Medtr6g045273.1 | seed maturation protein PM39, putative | LC |
chr6:16206369-16201116 | 20130731
Length = 1109
Score = 303 bits (775), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 233/540 (43%), Positives = 285/540 (52%), Gaps = 129/540 (23%)
Query: 1 MDLEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEININPVQKSLERMTIHNXXXXXXX 60
+DL DPHAPG+R A+A ANYQTKVTDPTGAG AE++I P+ KS++RMT+HN
Sbjct: 153 VDLVEDPHAPGSRFDAHAPANYQTKVTDPTGAGAAEMDITPIAKSIDRMTVHNEPIPSHQ 212
Query: 61 XXXLPTIAETQSPAVGGNKQFVPGLSTPTKTHYPSAE-THGQNLPELSGEIKTHYPRSHD 119
LPTIAETQ+P++G + QF P LST TKT YPS+ TH QNLP LS EIKT YP+SH+
Sbjct: 213 PHTLPTIAETQTPSLGIHNQFSPELSTATKTPYPSSTITHDQNLPHLSSEIKTQYPQSHE 272
Query: 120 QVMP---------NPISQPKI---LPT----QHPSTGGSHQQFMPEVSSITKTHYPSAES 163
Q P NP + LP+ QH SH Q +P S++TKT YPS
Sbjct: 273 QFTPVFSTSTHSQNPTHHQNLSQKLPSDPINQH-HFATSHDQNLPHFSNVTKTQYPSVTG 331
Query: 164 HGHILPGL--SSEITNHYPK-NHDEVMP-----------------DLTPSINTHEP---Y 200
H H P L + H P HD+ +P TP + EP +
Sbjct: 332 HDHSTPHLQRTEPGLKHTPAIRHDQHLPLSSGAMESEYPSVTSHDHFTPHLQRTEPGLKH 391
Query: 201 PSAIRHAQNLTGVSSATKTHYPSTGSHDQFSPELPISSEPK---------PQYPSARTH- 250
AIRH Q+L S A + YPS GSHDQF EL + +EPK PQ+ SAR H
Sbjct: 392 TPAIRHDQHLPLSSGAMEYEYPSAGSHDQFKSEL-LPTEPKARHHYATNLPQHSSARPHH 450
Query: 251 ------DQF----------NPQHSSAT---------ETHYPYAGSHGQFD--LPTEHKPQ 283
DQ+ NPQH SAT +T YP +GSH QF LPTEH
Sbjct: 451 PLNTSEDQYLSPYSSATEANPQHQSATNLPHHSGAMQTPYPSSGSHDQFRAGLPTEHH-- 508
Query: 284 HPSSRINDQFMPSQHASATYTHYPSAGSHGQFAPEFSTQMKTGQTVNNPTLPKVEEQP-- 341
S+ + Q+M QH+SA T PSAGSH Q+ N TL EQP
Sbjct: 509 --SATSHGQYMQPQHSSAMKTQNPSAGSHEQYN-------------KNTTL---GEQPHL 550
Query: 342 --QPMEQQSNQ--TSYTDKISSATSAVTNTAIGAKNAVANTAIGAKNAVTGTAIGAKNAV 397
+ ME SNQ +YTDKI SATSA+ +TA G AKNAV
Sbjct: 551 HYESMENSSNQGNNTYTDKIYSATSAIADTAAG----------------------AKNAV 588
Query: 398 AATLGYGEKGGDNTEQNESSQGSYTEKISSATSAIADKAIGAKNTVASKLGFGESSESGE 457
A+ LGYGEKG T + +Q SYT+KI SA SA+ +KA A N VASK+G+G SE+GE
Sbjct: 589 ASKLGYGEKGETTTAEAPLNQSSYTDKIYSAASAVTNKAADATNAVASKIGYG--SETGE 646
Score = 235 bits (600), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 160/346 (46%), Positives = 191/346 (55%), Gaps = 33/346 (9%)
Query: 348 SNQTSYTDKISSATSAVTNTAIG-------AKNAVANTAIGAKN---AVTGTAIGAKNAV 397
SNQ+SYT I+ + NT K +T + ++ + A AKNAV
Sbjct: 784 SNQSSYTSTIADKAATAKNTVASKLGYGEEGKTTAGDTPLNQRSYTSTIADKAATAKNAV 843
Query: 398 AATLGYGEKGGDNTEQNESSQGSYTEKISSATSAIADKAIGAKNTVASKLGFGESSESGE 457
A+ LGYGE G T + S+Q SYTEKISSATSAIADKA AKN VASKLGFGE + E
Sbjct: 844 ASKLGYGETGV-TTNETPSNQSSYTEKISSATSAIADKAASAKNAVASKLGFGEKGAT-E 901
Query: 458 NALRTQEEEKNEGFSSTTATGSAAEYGKRIAESLTEKLAPVYXXXXXXXXXXXXXXXXXX 517
T EE N G S AEYGK IA SLTEKL+PV
Sbjct: 902 TERMTTYEENNSGV-------SPAEYGKNIAASLTEKLSPV---TGKVIGTGTERVTAGV 951
Query: 518 XQDKGVSVKDYLAEKVRPGEDDRALSEVISETLHMKXXXXXXXXXXXX---XXXXXXXSD 574
QDKGVS+KDY +EK+RPGE+DRALSEVISE L+ K S+
Sbjct: 952 EQDKGVSMKDYFSEKLRPGEEDRALSEVISEKLYKKNVDEAVEDVYDEGEGRNARKVVSN 1011
Query: 575 AVHKRGDESEGRRRVPLGKVTESEEVKRRLGGEDRETERRYEESYVNSPGEGVVDKVKGM 634
AVHKRG + P GKVTESEEVKRRLGG D E + G+G+VD VK
Sbjct: 1012 AVHKRGGDDGKEVHRPRGKVTESEEVKRRLGGWDDEIKD-------GEFGKGMVDMVKET 1064
Query: 635 VGSWFTKPVDNQSSSQGDEVLSRKSGAEDKQFNQATGERRFQGSSN 680
VGSWF KP +N+ S+QG E + R +GAE Q +Q GERR Q S++
Sbjct: 1065 VGSWFGKPGENE-STQGSEGMPRNTGAEVGQVHQTAGERRLQDSAH 1109
Score = 72.8 bits (177), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/124 (50%), Positives = 72/124 (58%), Gaps = 27/124 (21%)
Query: 348 SNQTSYTDKISSATSAVTNTAIGAKNAVAN-TAIGAKN-------------------AVT 387
+NQ+SYTDKI +A SAVT+ A GAKNAVA+ G N AV
Sbjct: 696 TNQSSYTDKIYNAASAVTDKAAGAKNAVASKLGYGETNETTPGERQSNQTSYPSVTAAVI 755
Query: 388 GTAIGAKNAVAATLGYGEKGGDNTEQNESSQGSYTEKISSATSAIADKAIGAKNTVASKL 447
A AKNAVA+ LGYGE+G T + S+Q SYT S IADKA AKNTVASKL
Sbjct: 756 DKAALAKNAVASKLGYGEEGETTTGETPSNQSSYT-------STIADKAATAKNTVASKL 808
Query: 448 GFGE 451
G+GE
Sbjct: 809 GYGE 812
>Medtr1g100627.1 | hypothetical protein | HC |
chr1:45552041-45547838 | 20130731
Length = 521
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 103/230 (44%), Gaps = 68/230 (29%)
Query: 418 QGSYTEKISSATSAIADKAIGAKNTVASKLGFGESSESGENALRTQEEEKNEGFSSTTAT 477
Q YT++I +++ ADK + +N ASKLG E E
Sbjct: 322 QKGYTDEIEISSAEEADKTLPPENDEASKLGNDEKVEH---------------------- 359
Query: 478 GSAAEYGKRIAESLTEKLAPVYXXXXXXXXXXXXXX------XXXXXQDKGVSVKDYLAE 531
+E G + SLTEKLAPVY DKGV+VKDYLAE
Sbjct: 360 -QKSENGNNVGYSLTEKLAPVYGKVAEVGSAVKSKVYGTNDGTETKNGDKGVTVKDYLAE 418
Query: 532 KVRPGEDDRALSEVISETLHMKXXXXXXXXXXXXXXXXXXXSDAVHKRGDESEGRRRVPL 591
K++P E+D+ALSEVISETL+ +G E PL
Sbjct: 419 KLKPSEEDKALSEVISETLN---------------------------KGKEE------PL 445
Query: 592 GKVTESEEVKRRLGGEDRETERRYEESYVNSPGEGVVDKVKGMVGSWFTK 641
K +L E ++++ +EES VNSPG+G+VDKVK VGSWF K
Sbjct: 446 KK------EDGKLDSEVEKSDKVFEESNVNSPGKGMVDKVKDAVGSWFVK 489
Score = 58.9 bits (141), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 53/99 (53%), Gaps = 7/99 (7%)
Query: 3 LEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEIN-INPVQKSLERMTIHNXXXXXXXX 61
LE D G+R Y NYQTK TDP+GAG E+ +++SLERM +H+
Sbjct: 179 LEEDSQEQGSRTEEYTLPNYQTKETDPSGAGSGEVKETTALEESLERMNVHDEPKPTTEP 238
Query: 62 XXLPTIAE-TQSPAVGGNK---QFVPGLSTPTKT--HYP 94
P +A+ T+ P G++ QFVP LS T+T YP
Sbjct: 239 KIQPPVADSTEYPPSSGSRDIDQFVPHLSDATETPNEYP 277
>Medtr1g100623.2 | hypothetical protein | LC |
chr1:45546819-45542374 | 20130731
Length = 781
Score = 87.0 bits (214), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 39/128 (30%)
Query: 520 DKGVSVKDYLAEKVRPGEDDRALSEVISETLHMKXXXXXXXXXXXXXXXXXXXSDAVHKR 579
DKG SVKDYLAEK+RP E+D+ALSEV+SE LH +
Sbjct: 659 DKGASVKDYLAEKLRPSEEDKALSEVVSEALH---------------------------K 691
Query: 580 GDESEGRRRVPLGKVTESEEVKRRLGGEDRETERRYEESYVNSPGEGVVDKVKGMVGSWF 639
G E PL K L ED ++E+ EES NS G+G+VD+VK GSWF
Sbjct: 692 GKEE------PLKKE------DGILASEDEKSEKVLEESNANSSGKGMVDRVKDYYGSWF 739
Query: 640 TKPVDNQS 647
KP +NQS
Sbjct: 740 AKPEENQS 747
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 87/210 (41%), Gaps = 52/210 (24%)
Query: 1 MDLEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEI-NINPVQKSLERMTIHNXXXXXX 59
+DLE D G+R AY YQTK T+P G EI +I P+++SLERM +H+
Sbjct: 137 IDLEEDSQEQGSRAEAYTFPTYQTKDTNPNEEGSDEIKDITPLEESLERMNVHDESKPTT 196
Query: 60 XXXXLPTIAETQSPA-VGGNKQFVPGLSTPTKTH--YPSAE-----THGQNLPE------ 105
+A+T+ P+ V + QFVP + TKT YP Q + E
Sbjct: 197 EPKIQSYVADTEYPSDVKSHDQFVPHFTDATKTQNEYPQETLSTDINRDQKILEEDSQDQ 256
Query: 106 ----------------------LSGEIKTHYPRS--------HDQVMPNPISQPKILP-- 133
S E K P HD PNP ++ KI P
Sbjct: 257 GSRTETYIHPNYQTKDTDPSGAESNETKDITPLEESLERMNVHDD-EPNPTTETKIQPFV 315
Query: 134 --TQHPSTGGSHQQFMPEVSSITKTH--YP 159
++PS GSH QF P ++ T+T YP
Sbjct: 316 TDIEYPSAAGSHDQFAPHFANATETQNEYP 345
>Medtr1g100623.1 | hypothetical protein | LC |
chr1:45546819-45542374 | 20130731
Length = 829
Score = 86.7 bits (213), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 54/128 (42%), Positives = 66/128 (51%), Gaps = 39/128 (30%)
Query: 520 DKGVSVKDYLAEKVRPGEDDRALSEVISETLHMKXXXXXXXXXXXXXXXXXXXSDAVHKR 579
DKG SVKDYLAEK+RP E+D+ALSEV+SE LH +
Sbjct: 707 DKGASVKDYLAEKLRPSEEDKALSEVVSEALH---------------------------K 739
Query: 580 GDESEGRRRVPLGKVTESEEVKRRLGGEDRETERRYEESYVNSPGEGVVDKVKGMVGSWF 639
G E PL K L ED ++E+ EES NS G+G+VD+VK GSWF
Sbjct: 740 GKEE------PLKKE------DGILASEDEKSEKVLEESNANSSGKGMVDRVKDYYGSWF 787
Query: 640 TKPVDNQS 647
KP +NQS
Sbjct: 788 AKPEENQS 795
Score = 68.2 bits (165), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 87/210 (41%), Gaps = 52/210 (24%)
Query: 1 MDLEADPHAPGNRHPAYASANYQTKVTDPTGAGGAEI-NINPVQKSLERMTIHNXXXXXX 59
+DLE D G+R AY YQTK T+P G EI +I P+++SLERM +H+
Sbjct: 185 IDLEEDSQEQGSRAEAYTFPTYQTKDTNPNEEGSDEIKDITPLEESLERMNVHDESKPTT 244
Query: 60 XXXXLPTIAETQSPA-VGGNKQFVPGLSTPTKTH--YPSAE-----THGQNLPE------ 105
+A+T+ P+ V + QFVP + TKT YP Q + E
Sbjct: 245 EPKIQSYVADTEYPSDVKSHDQFVPHFTDATKTQNEYPQETLSTDINRDQKILEEDSQDQ 304
Query: 106 ----------------------LSGEIKTHYP--------RSHDQVMPNPISQPKILP-- 133
S E K P HD PNP ++ KI P
Sbjct: 305 GSRTETYIHPNYQTKDTDPSGAESNETKDITPLEESLERMNVHDD-EPNPTTETKIQPFV 363
Query: 134 --TQHPSTGGSHQQFMPEVSSITKTH--YP 159
++PS GSH QF P ++ T+T YP
Sbjct: 364 TDIEYPSAAGSHDQFAPHFANATETQNEYP 393
>Medtr1g100607.1 | hypothetical protein | LC |
chr1:45530692-45529758 | 20130731
Length = 209
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%)
Query: 604 LGGEDRETERRYEESYVNSPGEGVVDKVKGMVGSWFTKPVDNQS 647
L ED ++++ +EES V SP +G+VD+VK GSWF KP +NQS
Sbjct: 130 LASEDEKSKKVFEESNVTSPRKGMVDRVKNYYGSWFAKPEENQS 173