Miyakogusa Predicted Gene

Lj0g3v0196149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0196149.1 Non Chatacterized Hit- tr|I1MMD6|I1MMD6_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.44385
PE,72.41,0,MYB_LIKE,Myb-like domain; DNA BINDING,NULL; SWI/SNF-RELATED
MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULA,CUFF.12414.1
         (784 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT3G24870.2 | Symbols:  | Helicase/SANT-associated, DNA binding ...   595   e-170
AT3G24870.1 | Symbols:  | Helicase/SANT-associated, DNA binding ...   593   e-169
AT3G24880.1 | Symbols:  | Helicase/SANT-associated, DNA binding ...   583   e-166

>AT3G24870.2 | Symbols:  | Helicase/SANT-associated, DNA binding
            protein | chr3:9075237-9084278 REVERSE LENGTH=1899
          Length = 1899

 Score =  595 bits (1533), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 354/696 (50%), Positives = 426/696 (61%), Gaps = 62/696 (8%)

Query: 2    LFGKRPASS-NVGSVPTKRMRTATRHRGVSPF-TVTTGTIQAQDRADASSGDNNSFHDDH 59
            L  KRP S+ N GSVPT+R+RTA+RHR VSPF   TTG +    + DASSGD +SF D++
Sbjct: 833  LIVKRPDSNINAGSVPTRRVRTASRHRVVSPFGCATTGNLPVPSKTDASSGDTSSFQDEY 892

Query: 60   IDQSTLHVGPLIQKSMEVESVTDFEKQLAYDCAETSIXXXXXXXAMTLGSAYEQGWKLDS 119
               S+LH G  +QK  EVES  +FEK L YD AETS            GSAY+Q W L+ 
Sbjct: 893  ---SSLHGGSAVQKGTEVESSVNFEKLLPYDMAETS-GKPKKKKKTHQGSAYDQTWHLNP 948

Query: 120  SVQNEQRDHSSKRLNSHHFESNGNCGLYGQHNVKKPKITKQSLDHALDNNSPMTNSVPSP 179
            SV  EQ+DH  KR   ++F+ NG   LYG H+ KK K TKQ +++  D   P T S+PSP
Sbjct: 949  SVHVEQKDHWKKR-PENNFDMNG---LYGPHSAKKQKTTKQLVENNFDMAIPHTGSIPSP 1004

Query: 180  AASQMSNMSNPNKFIKIISGRERGRKAKALKISAGQHGSGSPWSLFEDQALVVLVHDMGP 239
            AASQMSNMSNPNK IK I GR+RGRK K LKIS GQHGSG+PWSLFEDQALVVLVHDMGP
Sbjct: 1005 AASQMSNMSNPNKSIKFIGGRDRGRKIKGLKISPGQHGSGNPWSLFEDQALVVLVHDMGP 1064

Query: 240  NWELVSDAINSTLQIKCIFRKPNECKERHKILMXXXXXXXXXXXXXXXXXQSYPSTLPGI 299
            NWEL+SDA+NSTL+IK I+R P ECK+RHKILM                 QSYPSTLPGI
Sbjct: 1065 NWELISDAMNSTLKIKYIYRNPTECKDRHKILMDKTAGDGADSAEDSGNSQSYPSTLPGI 1124

Query: 300  PKGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLRNQIDNQDLKHLVPIHNSHVIA 359
            PKGSARQLFQRLQGPMEEDTLKSHFEKI  IG+K HY + Q D +D K +VP+HNS V+A
Sbjct: 1125 PKGSARQLFQRLQGPMEEDTLKSHFEKICLIGKKLHYRKTQNDGRDPKQIVPVHNSQVMA 1184

Query: 360  LSQVCPNNLSGGILTPLDFCETNTSNPDVPALGYHGLHTGSLASSNQGSVPSVLPTSGVN 419
            LSQV PNNL+GG+LTPLD C+ +TS  DV +L   G     L   NQG+   VLPTSG +
Sbjct: 1185 LSQVFPNNLNGGVLTPLDVCDASTSGQDVFSLENPG-----LPMLNQGT--PVLPTSGAH 1237

Query: 420  TSLPGSSGMVLNNNFSPSSGPTAASV---RYGVPRSSPLSVDEQQKLQQYNQMLSGRNIQ 476
             S PGSSG+VL+NN   +SG  +ASV   R+ VPR S L +DEQ +LQQ+NQ LSGRN+Q
Sbjct: 1238 PSTPGSSGVVLSNNLPTTSGLQSASVRDGRFNVPRGS-LPLDEQHRLQQFNQTLSGRNLQ 1296

Query: 477  QSSMSVPGTLPGNDHGVCXXXXXXXXXXXXXINRSMAMPRPGFQGXXXXXXXXXXXXXXX 536
            Q S+S P  + G+D G               +NR+  M RPGFQG               
Sbjct: 1297 QPSLSTPAAVSGSDRG-HRMVPGGNAMGVSGMNRNTPMSRPGFQGMASAAMPNTGNMHTS 1355

Query: 537  -------XXXXXXGVGSGQGNSMSRPHDPLMRPGHNPEHQRQMVAPQHQTQVTQGNNKSN 589
                         G G+ QGNSM RP +                A QH  +  QGN+   
Sbjct: 1356 GMVGIPNTGNIHSGGGASQGNSMIRPRE----------------AVQHMMRAAQGNSPGI 1399

Query: 590  PALCGISSAFNNQTTPPPVQPYPGHAQQQPHRSNPR---------PPFQGPNHATNSQQQ 640
            PA   +SS F NQTT  PVQ YPGH  QQ H+ +P+         P  Q P+ AT +QQ+
Sbjct: 1400 PAFSNLSSGFTNQTT--PVQAYPGHLSQQ-HQMSPQSHVLGNSHHPHLQSPSQATGAQQE 1456

Query: 641  AYAVRLAKERXXXXXXXXXXXXXXXIAASNALMPHV 676
            A+A+     R                 AS ++MPHV
Sbjct: 1457 AFAI-----RQRQIHQRYLQQQQQQFPASGSMMPHV 1487


>AT3G24870.1 | Symbols:  | Helicase/SANT-associated, DNA binding
            protein | chr3:9075237-9084278 REVERSE LENGTH=1907
          Length = 1907

 Score =  593 bits (1528), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 354/696 (50%), Positives = 428/696 (61%), Gaps = 60/696 (8%)

Query: 2    LFGKRPASS-NVGSVPTKRMRTATRHRGVSPF-TVTTGTIQAQDRADASSGDNNSFHDDH 59
            L  KRP S+ N GSVPT+R+RTA+RHR VSPF   TTG +    + DASSGD +SF D++
Sbjct: 839  LIVKRPDSNINAGSVPTRRVRTASRHRVVSPFGCATTGNLPVPSKTDASSGDTSSFQDEY 898

Query: 60   IDQSTLHVGPLIQKSMEVESVTDFEKQLAYDCAETSIXXXXXXXAMTLGSAYEQGWKLDS 119
               S+LH G  +QK  EVES  +FEK L YD AETS            GSAY+Q W L+ 
Sbjct: 899  ---SSLHGGSAVQKGTEVESSVNFEKLLPYDMAETS-GKPKKKKKTHQGSAYDQTWHLNP 954

Query: 120  SVQNEQRDHSSKRLNSHHFESNGNCGLYGQHNVKKPKITKQSLDHALDNNSPMTNSVPSP 179
            SV  EQ+DH  KR   ++F+ NG   LYG H+ KK K TKQ +++  D   P T S+PSP
Sbjct: 955  SVHVEQKDHWKKR-PENNFDMNG---LYGPHSAKKQKTTKQLVENNFDMAIPHTGSIPSP 1010

Query: 180  AASQMSNMSNPNKFIKIISGRERGRKAKALKISAGQHGSGSPWSLFEDQALVVLVHDMGP 239
            AASQMSNMSNPNK IK I GR+RGRK K LKIS GQHGSG+PWSLFEDQALVVLVHDMGP
Sbjct: 1011 AASQMSNMSNPNKSIKFIGGRDRGRKIKGLKISPGQHGSGNPWSLFEDQALVVLVHDMGP 1070

Query: 240  NWELVSDAINSTLQIKCIFRKPNECKERHKILMXXXXXXXXXXXXXXXXXQSYPSTLPGI 299
            NWEL+SDA+NSTL+IK I+R P ECK+RHKILM                 QSYPSTLPGI
Sbjct: 1071 NWELISDAMNSTLKIKYIYRNPTECKDRHKILMDKTAGDGADSAEDSGNSQSYPSTLPGI 1130

Query: 300  PKGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLRNQIDNQDLKHLVPIHNSHVIA 359
            PKGSARQLFQRLQGPMEEDTLKSHFEKI  IG+K HY + Q D +D K +VP+HNS V+A
Sbjct: 1131 PKGSARQLFQRLQGPMEEDTLKSHFEKICLIGKKLHYRKTQNDGRDPKQIVPVHNSQVMA 1190

Query: 360  LSQVCPNNLSGGILTPLDFCETNTSNPDVPALGYHGLHTGSLASSNQGSVPSVLPTSGVN 419
            LSQV PNNL+GG+LTPLD C+ +TS  DV +L   G     L   NQG+   VLPTSG +
Sbjct: 1191 LSQVFPNNLNGGVLTPLDVCDASTSGQDVFSLENPG-----LPMLNQGT--PVLPTSGAH 1243

Query: 420  TSLPGSSGMVLNNNFSPSSGPTAASV---RYGVPRSSPLSVDEQQKLQQYNQMLSGRNIQ 476
             S PGSSG+VL+NN   +SG  +ASV   R+ VPR S L +DEQ +LQQ+NQ LSGRN+Q
Sbjct: 1244 PSTPGSSGVVLSNNLPTTSGLQSASVRDGRFNVPRGS-LPLDEQHRLQQFNQTLSGRNLQ 1302

Query: 477  QSSMSVPGTLPGNDHGVCXXXXXXXXXXXXXINRSMAMPRPGFQGXXXXXXXXXXXXXXX 536
            Q S+S P  + G+D G               +NR+  M RPGFQG               
Sbjct: 1303 QPSLSTPAAVSGSDRG-HRMVPGGNAMGVSGMNRNTPMSRPGFQGMASAAMPNTGNMHTS 1361

Query: 537  -------XXXXXXGVGSGQGNSMSRPHDPLMRPGHNPEHQRQMVAPQHQTQVTQGNNKSN 589
                         G G+ QGNSM RP + +       +H  +M       Q  QGN+   
Sbjct: 1362 GMVGIPNTGNIHSGGGASQGNSMIRPREAV-------QHMMRM-------QAAQGNSPGI 1407

Query: 590  PALCGISSAFNNQTTPPPVQPYPGHAQQQPHRSNPR---------PPFQGPNHATNSQQQ 640
            PA   +SS F NQTT  PVQ YPGH  QQ H+ +P+         P  Q P+ AT +QQ+
Sbjct: 1408 PAFSNLSSGFTNQTT--PVQAYPGHLSQQ-HQMSPQSHVLGNSHHPHLQSPSQATGAQQE 1464

Query: 641  AYAVRLAKERXXXXXXXXXXXXXXXIAASNALMPHV 676
            A+A+     R                 AS ++MPHV
Sbjct: 1465 AFAI-----RQRQIHQRYLQQQQQQFPASGSMMPHV 1495


>AT3G24880.1 | Symbols:  | Helicase/SANT-associated, DNA binding
            protein | chr3:9086457-9095537 REVERSE LENGTH=1957
          Length = 1957

 Score =  583 bits (1502), Expect = e-166,   Method: Compositional matrix adjust.
 Identities = 358/745 (48%), Positives = 431/745 (57%), Gaps = 106/745 (14%)

Query: 2    LFGKRPASS-NVGSVPTKRMRTATRHRGVSPF-TVTTGTIQAQDRADASSGDNNSFHDDH 59
            L  KRP S+ N GSVPT+R+RTA+R R VSPF   TTG +    + DASSGD +SF D++
Sbjct: 839  LMAKRPDSNINAGSVPTRRVRTASRQRVVSPFGCATTGNLPVPSKTDASSGDTSSFQDEY 898

Query: 60   IDQSTLHVGPLIQKSMEVESVTDFEKQLAYDCAETSIXXXXXXXAMTLGSAYEQGWKLDS 119
               S+LH G  +QK  EVES  +FEK L YD AETS            GSAY+Q W LD 
Sbjct: 899  ---SSLHGGSAVQKGTEVESSVNFEKLLPYDMAETS-GRPKKKKKTHQGSAYDQTWHLDP 954

Query: 120  SVQNEQRDHSSKRLNSHHFESNGNCGLYGQHNVKKPKITKQSLDHALDNNSPMTNSVPSP 179
            SV  EQ+DH  KR   ++F+ NG   LYG H+ KK K TKQ +++  D   P T S+PSP
Sbjct: 955  SVHVEQKDHWKKR-PENNFDMNG---LYGPHSAKKQKTTKQLVENNFDMAIPHTGSIPSP 1010

Query: 180  AASQMSNMSNPNKFIKIISGRERGRKAKALKISAGQHGSGSPWSLFEDQALVVLVHDMGP 239
            AASQMSNMSNPNK IK I GR+RGRK K LKIS GQHGSG+PWSLFEDQALVVLVHDMGP
Sbjct: 1011 AASQMSNMSNPNKSIKFIGGRDRGRKIKGLKISPGQHGSGNPWSLFEDQALVVLVHDMGP 1070

Query: 240  NWELVSDAINSTLQIKCIFRKPNECKERHKILMXXXXXXXXXXXXXXXXXQSYPSTLPGI 299
            NWEL+SDA+NSTL+IKCI+R P ECK+RHKILM                 QSYPSTLPGI
Sbjct: 1071 NWELISDAMNSTLKIKCIYRNPTECKDRHKILMDKTAGDGADSAEDSGNSQSYPSTLPGI 1130

Query: 300  PKGSARQLFQRLQGPMEEDTLKSHFEKIIKIGQKQHYLRNQI------------------ 341
            PKGSARQLFQRLQGPMEEDTLKSHFEKI  IG+K HY + Q                   
Sbjct: 1131 PKGSARQLFQRLQGPMEEDTLKSHFEKICLIGKKLHYRKTQSVIGVSVVSFVHGIQFSSC 1190

Query: 342  ------------------------------DNQDLKHLVPIHNSHVIALSQVCPNNLSGG 371
                                          D +D K +VP+HNS V+ALSQV PNNL+GG
Sbjct: 1191 TGAGISQSLDIPGLHVSKYSCKSWLGFPENDGRDSKQIVPVHNSQVMALSQVFPNNLNGG 1250

Query: 372  ILTPLDFCETNTSNPDVPALGYHGLHTGSLASSNQGSVPSVLPTSGVNTSLPGSSGMVLN 431
            +LTPLD C+ +TS  DV +L   G     L   NQG+   VLPTSG + S PGSSG+VL+
Sbjct: 1251 VLTPLDVCDASTSGQDVFSLENPG-----LPMLNQGT--PVLPTSGAHPSTPGSSGVVLS 1303

Query: 432  NNFSPSSGPTAASVRYG---VPRSSPLSVDEQQKLQQYNQMLSGRNIQQSSMSVPGTLPG 488
            NN   +SG  +ASVR G   VPR S L +DEQ +LQQ+NQ LSGRN+QQ S+S P  + G
Sbjct: 1304 NNLPTTSGLQSASVRDGRFNVPRGS-LPLDEQHRLQQFNQTLSGRNLQQPSLSTPAAVSG 1362

Query: 489  NDHGVCXXXXXXXXXXXXXINRSMAMPRPGFQGXXXXXXXXXXXXXXXXXXXX------- 541
            +D G               +NR+  M RPGFQG                           
Sbjct: 1363 SDRG-HRMVPGGNAMGVSGMNRNTPMSRPGFQGMASSAMPNTGSMLSSGMVEIPNTGNIH 1421

Query: 542  XGVGSGQGNSMSRPHDPLMRPGHNPEHQRQMVAPQHQTQVTQGNNKSNPALCGISSAFNN 601
             G G+ QGNSM RP + +       +H  +M       Q  QGN+   PA   +SS F N
Sbjct: 1422 SGGGASQGNSMIRPREAV-------QHMMRM-------QAAQGNSPGIPAFSNLSSGFTN 1467

Query: 602  QTTPPPVQPYPGHAQQQPHRSNPR---------PPFQGPNHATNSQQQAYAVRLAKERXX 652
            QTT  PVQ YPGH  QQ H+ +P+         P  Q P+ AT +QQ+A+A+R   +R  
Sbjct: 1468 QTT--PVQAYPGHLSQQ-HQMSPQSHVLGNSHHPHLQSPSQATGAQQEAFAIR---QRQI 1521

Query: 653  XXXXXXXXXXXXXIAASNALMPHVQ 677
                           AS ++MPHVQ
Sbjct: 1522 HQRYLQQQQQQQQFPASGSMMPHVQ 1546