Miyakogusa Predicted Gene
- Lj0g3v0195199.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0195199.1 Non Chatacterized Hit- tr|K4A5P0|K4A5P0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034194,41.03,2e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.12340.1
(520 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma03g40900.1 560 e-159
Glyma19g43560.1 221 2e-57
Glyma10g03940.1 148 1e-35
Glyma13g18100.1 144 2e-34
Glyma04g34680.1 94 5e-19
Glyma06g19980.1 93 7e-19
Glyma01g22590.1 92 1e-18
Glyma14g39610.1 90 8e-18
Glyma14g27580.1 82 2e-15
Glyma05g27060.1 80 4e-15
Glyma02g41240.1 78 2e-14
Glyma08g10040.1 74 3e-13
Glyma09g21600.1 70 5e-12
>Glyma03g40900.1
Length = 864
Score = 560 bits (1442), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/522 (59%), Positives = 348/522 (66%), Gaps = 58/522 (11%)
Query: 1 MATAGVSSSEWHRHSLSRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPC 60
MA +SSSEW + LS VT ALASA DAV SYVITKFAGYCKLQ PC
Sbjct: 2 MANTKISSSEWRK--LSPSVTTALASAFLEWLLILFLFIDAVFSYVITKFAGYCKLQIPC 59
Query: 61 LFCSRLDHVLGKEKREYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYATSN 120
L CSRLDHVLGKEK YY DLICSGHK+EIS L LC AHDKLV++QGMCE+C S+AT N
Sbjct: 60 LLCSRLDHVLGKEKGGYYWDLICSGHKTEISYLVLCCAHDKLVNVQGMCESCLFSFATIN 119
Query: 121 KSNAEAYRLLTGKLGEESGSRFDHVPLLGEHTIAKRCSCCGEQWVLNSYDQKVVFNKSIG 180
KSNAE YRLL GKLGE S +RFD PLLGE++ K CSCC EQ VL YDQ++V KSIG
Sbjct: 120 KSNAETYRLLVGKLGEGSETRFDQDPLLGENS--KCCSCCNEQLVLKGYDQRLVITKSIG 177
Query: 181 SGPADFDASDSVGNSFHEKRSSKPFVSVRDAPLRNNHVDPLSRVGYTELNITSDTESESE 240
SG ADFD S+ VGN FH+KR KPFVS R A LRN H DPLS VGYTEL ITSDTESE +
Sbjct: 178 SGSADFDGSNVVGNKFHKKRRVKPFVSSRAAHLRNKHADPLSHVGYTELKITSDTESEPD 237
Query: 241 VPLSDDDKRCSKPFVSVKDAPLRNNHVNPLSRVGYTELKITSDTESESEVPLSDDDGISI 300
V L DDD G SI
Sbjct: 238 VSLFDDD-------------------------------------------------GTSI 248
Query: 301 PIHGTDHTKEDIEVPCSHTEPSPIDLHEDLASGKSKTSASVLEPLLSKSRTQLENTDLCA 360
P+ GTD TKEDIEV C H EP D +E+LA K TSAS L+P LS+S +LEN D+
Sbjct: 249 PVQGTDDTKEDIEVSCEHMEPHIPDSNENLAFEKLGTSASGLQPSLSESGMRLENIDVHG 308
Query: 361 NKSSAAMTERGNGFVEHDWQQ-VERSAVCPSPSEHISCNDVPTSSNKIGIPLEVSKENYD 419
KS+A TE +G + D QQ VER+ VCPSP E IS N+VP SSNKIG+P+EVSKENYD
Sbjct: 309 TKSTAT-TESRDGLAKLDSQQHVERNDVCPSPRELISFNEVPASSNKIGVPVEVSKENYD 367
Query: 420 STTVEVGLTSEQRPTMDGEEIVKSGSKLTTSKAGLEPTPVSSDIALQNPVLLDLGDAYKL 479
TT EVG+ S+QR T D I++S K TTS+ GLE TP SSDI QNP LLDLGDAYKL
Sbjct: 368 LTTDEVGIKSKQRITTDCGGIIESVDKPTTSEVGLESTPFSSDIGQQNPNLLDLGDAYKL 427
Query: 480 AVSN-RGRQLSGMLAEVWTGKDSTRVSEDLKTLLSQFSATRG 520
AVSN RGR GML E W GKDSTR+SEDLK LLSQFSATRG
Sbjct: 428 AVSNSRGR--PGMLVEHWLGKDSTRISEDLKILLSQFSATRG 467
>Glyma19g43560.1
Length = 528
Score = 221 bits (563), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 170/439 (38%), Positives = 195/439 (44%), Gaps = 182/439 (41%)
Query: 136 EESGSRFDHVPLLGEHTIAKRCSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASDSVGNS 195
E S +RFD PLLGE++ K+V KSIGSG ADFD S+ VGN
Sbjct: 5 EGSVTRFDQDPLLGENS-------------------KLVITKSIGSGNADFDESNVVGNK 45
Query: 196 FHEKRSSKPFVSVRDAPLRNNHVDPLSRVGYTELNITSDTESESEVPLSDDDKRCSKPFV 255
FH+K R +KPFV
Sbjct: 46 FHKK-------------------------------------------------RRAKPFV 56
Query: 256 SVKDAPLRNNHVNPLSRVGYTELKITSDTESESEVPLSDDDGISIPIHGTDHTKEDIEVP 315
S + LRN +PLS V + GT TKEDIE
Sbjct: 57 SSRATHLRNKQADPLSHV----------------------------VQGTYDTKEDIE-- 86
Query: 316 CSHTEPSPIDLHEDLASGKSKTSASVLEPLLSKSRTQLENTDLCANKSSAAMTERGNGFV 375
P LS+S QLENTD+ KS+A TE +G
Sbjct: 87 ----------------------------PSLSESGMQLENTDVHGTKSTAETTESRDGLA 118
Query: 376 EHDWQQ-VERSAVCPSPSEHISCNDVPTSSNKIGIPLEVSKENY---------------- 418
+ D QQ VER+AVC SP E IS N+VP SSNKIG+P+EVSKEN+
Sbjct: 119 KLDSQQHVERNAVCASPRELISFNEVPASSNKIGVPVEVSKENWVSCSSLQKVDERNKLV 178
Query: 419 ------------------------------------DSTTVEVGLTSEQRPTMDGEEIVK 442
D TT EVG S+QR T D EI++
Sbjct: 179 LNVVHCRKKHFIKPNRLLIFHYFKSITFGPFFFLVDDLTTDEVGTKSKQRITTDCGEIIE 238
Query: 443 SGSKLTTSKAGLEPTPVSSDIALQNPVLLDLGDAYKLAVSN-RGRQLSGMLAEVWTGKDS 501
S KLTTS+AGLE TP SSDI QNP LLDLGDAYKLAVSN RGR GM E W GKDS
Sbjct: 239 SVDKLTTSEAGLESTPFSSDIGQQNPNLLDLGDAYKLAVSNSRGR--PGMPVEHWLGKDS 296
Query: 502 TRVSEDLKTLLSQFSATRG 520
TR+SEDLK LLSQFSATRG
Sbjct: 297 TRISEDLKILLSQFSATRG 315
>Glyma10g03940.1
Length = 608
Score = 148 bits (374), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 149/512 (29%), Positives = 210/512 (41%), Gaps = 122/512 (23%)
Query: 44 SYVITKFAGYCKLQTPCLFCSRLDHVLGKEKREYYRDLICSGHKSEISSLALCPAHDKLV 103
SY++TKFA YC+LQ PCL CSRLDH+L +E+ E+Y +L CS HKSEISSL LC H KL
Sbjct: 28 SYMLTKFASYCQLQMPCLLCSRLDHILRRERPEFYENLFCSNHKSEISSLILCHIHGKLA 87
Query: 104 SLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEESGSRFDHVPLL---------GEHTIA 154
MC+ C LS K NA+ RLL GK G G P L G
Sbjct: 88 DGHRMCDDCLLSVTAKTKCNAKTQRLLVGKFGLVLGGSGFKSPSLSKDLFFGSKGARLCT 147
Query: 155 KRCSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASDSVGNSFHEKRSSKPFVSVRDAPL- 213
++C+CCG+ W +D ++ S+ H + KP++ + AP
Sbjct: 148 RQCTCCGKLW------------------KSDQNSPRSIHLKSHGRAVLKPYIPLPCAPTQ 189
Query: 214 -RNNHVD-------------------PLSRVGYTELNITSDTESESEVPLSDDDKRCSKP 253
R NH D PLS VGYTEL + S++ESE P
Sbjct: 190 RRLNHQDNLKKMRDKFPGSEGKSSFRPLSHVGYTELRLNSNSESEF-------------P 236
Query: 254 FVSVKDAPLRNNHVNPLSRVGYTELKITSDTESESEVPLSDDDGISIPIHGTDHTKEDIE 313
F D H N + S+D PI T
Sbjct: 237 FSDDDDDVSSVYHEN---------------------IEASND-----PIAVTSAPSSKC- 269
Query: 314 VPCSHTEPSPIDLHEDLASGKSKTSASVLEPLLSKSRTQLENTDLCANKSSAAMTE-RGN 372
+PC PID +S KS PL S D C + + + N
Sbjct: 270 IPCDLNPKEPID-----SSAKSM-------PLPS---------DQCGEPNVSKQQDVNAN 308
Query: 373 GFVEHDWQQVERSAVCPSPSEHISCNDVPTSSNKIGIPLEVSKENYDSTTV----EVGLT 428
VE++ QQ + + P+E IS +V +P S E D+ V + G+
Sbjct: 309 CAVENNLQQANQESFSSDPAELISIEEVSPPPIVKNVPHRES-EFEDTADVAQARDTGMV 367
Query: 429 SEQRPTMDGEEIVKSGSKLTTSKAGLEPTPVSSDIALQNPVLLDLGDAYKLAVSNRGRQL 488
SE+ + E + K G++ T A + PV D A NP + + K +V+ + R+
Sbjct: 368 SEK----NEEVLQKIGTEET---ASTDTHPVVCDSAPINPKEENSSNMNKSSVTTKEREQ 420
Query: 489 SGMLAEVWTGKDSTRVSEDLKTLLSQFSATRG 520
+G + E T ++ V E+ + S S+ G
Sbjct: 421 TGFIKEKPTTEEVNNVKEEQEQSPSDKSSPNG 452
>Glyma13g18100.1
Length = 659
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 123/386 (31%), Positives = 168/386 (43%), Gaps = 86/386 (22%)
Query: 44 SYVITKFAGYCKLQTPCLFCSRLDHVLGKEKREYYRDLICSGHKSEISSLALCPAHDKLV 103
SY++TKFA YC+LQ PCL CSRLD +L +E+ E+Y +L CS HKSEISSL LC H KL
Sbjct: 28 SYMLTKFASYCQLQMPCLLCSRLDQILCRERPEFYVNLFCSSHKSEISSLILCHIHGKLA 87
Query: 104 SLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEESGSRFDHVPLL---------GEHTIA 154
MC+ C LS K NA+ ++LL GK G G P L G
Sbjct: 88 DGHRMCDDCLLSVTAKTKCNAKTHKLLVGKFGLVLGGSGFKSPSLSRDLFAGSKGARLCT 147
Query: 155 KRCSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASDSVGNSFHEKRSSKPFVSVRDAPL- 213
++C+CCG+ W KS + P S G +F KP + AP
Sbjct: 148 RQCTCCGKLW------------KSDQNSPRSIQLK-SPGRAFL-----KPNIPFPCAPRQ 189
Query: 214 -RNNHVDPLSRVGYTELNITSDTESESEVPLSDDDKRCSKPFVSVKDAPLRNNHVNPLSR 272
R NH D L ++ + P S+ + PLS
Sbjct: 190 SRLNHRDNLKKM-------------RDKFPGSEG-----------------KSSFQPLSH 219
Query: 273 VGYTELKITSDTESESEVPLSDDDGISIPIH-----GTDHTKEDIEVPCSHTEPS---PI 324
+GYTEL++ SD SESE SDDD +S H D + P S+ PS P
Sbjct: 220 IGYTELRLNSD--SESEFLFSDDDDVSSVFHENIEASNDPKAQVTSAPSSNCIPSALNPE 277
Query: 325 DLHEDLASGKSKTSASVLEPLLSKSRTQLENTDLCANKSSAAMTERGNGFVEHDWQQVER 384
+L++ A S +EP +S E+ D+ AN + E + QQ ++
Sbjct: 278 NLNDSSAKSMPLPSDQCVEPNVS------EHQDVNANSAE-----------EINLQQEKQ 320
Query: 385 SAVCPSPSEHISCNDVPTSSNKIGIP 410
+E IS N+V S + +P
Sbjct: 321 ETFSSDLAELISINEVSPSPIVMNVP 346
>Glyma04g34680.1
Length = 590
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 12/141 (8%)
Query: 40 DAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEKRE-YYRDLICSGHKSEISSLALCPA 98
D L+++ +FA + +L PC C+R DHV+ + YY + +C HK ++SSLA C
Sbjct: 37 DGFLAFLANEFARFFELHIPCWLCTRFDHVMVHRNPDFYYNESVCEAHKKDMSSLAFCHN 96
Query: 99 HDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEE-----------SGSRFDHVPL 147
H KL ++ MCE C LS+AT +S+ + Y+ L G L ++ S D +
Sbjct: 97 HKKLSDIRKMCEGCLLSFATEKESDCDTYKSLVGILHKDLECFVQDDQPIQLSLKDDGVM 156
Query: 148 LGEHTIAKRCSCCGEQWVLNS 168
+ + ++CSCCGE + S
Sbjct: 157 QVDRSSNQKCSCCGEPLKMKS 177
>Glyma06g19980.1
Length = 482
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 77/146 (52%), Gaps = 12/146 (8%)
Query: 40 DAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEKRE-YYRDLICSGHKSEISSLALCPA 98
D L+++ +FA + +L PC C+R DHV+ + YY + +C HK ++SSLA C
Sbjct: 37 DGFLAFLANEFARFFELHIPCWLCTRFDHVMVHRNPDFYYNESVCEAHKKDMSSLAFCHN 96
Query: 99 HDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEE-----------SGSRFDHVPL 147
H KL ++ MCE C LS+AT +S+ + Y+ L G L ++ S D +
Sbjct: 97 HKKLSDIRKMCEGCLLSFATEKESDCDTYKSLVGILHKDLECFVQDDQPIQLSLKDDGFM 156
Query: 148 LGEHTIAKRCSCCGEQWVLNSYDQKV 173
+ + ++CSCCGE + S + V
Sbjct: 157 QVDRSNNQKCSCCGEPLKMKSSNSNV 182
>Glyma01g22590.1
Length = 235
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/60 (80%), Positives = 49/60 (81%), Gaps = 3/60 (5%)
Query: 462 DIALQNPVLLDLGDAYKLAVSN-RGRQLSGMLAEVWTGKDSTRVSEDLKTLLSQFSATRG 520
DI QNP LLDLGDAYKLAVSN RGR GML E W GKDSTR+SEDLK LLSQFSATRG
Sbjct: 1 DIGQQNPNLLDLGDAYKLAVSNSRGR--PGMLVEHWLGKDSTRISEDLKILLSQFSATRG 58
>Glyma14g39610.1
Length = 1042
Score = 89.7 bits (221), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 63/121 (52%), Gaps = 6/121 (4%)
Query: 43 LSYVITKFAGYCKLQTPCLFCSRLDHVLGKEKREY-YRDLICSGHKSEISSLALCPAHDK 101
SY+ITKFA LQ PCL+CSR+DHVL KE + ++DL+C H +EIS L C H +
Sbjct: 40 FSYLITKFAKCVGLQPPCLWCSRVDHVLQKEHGTHLHKDLVCEAHAAEISKLGYCSNHQR 99
Query: 102 LVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEESGSRFDHVPLLGEHTIAKRCSCCG 161
L MCE C S ++ N+ R + S H E I +RCSCC
Sbjct: 100 LAETHSMCEDCLASRPNQHE-NSFGMRHRIAFISWVSS----HGKHENEDDIMRRCSCCN 154
Query: 162 E 162
E
Sbjct: 155 E 155
>Glyma14g27580.1
Length = 430
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 91/209 (43%), Gaps = 48/209 (22%)
Query: 59 PCLFCSRLDHVLGKEKREYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYAT 118
PCL CSRL+H+L ++ E Y L CS KSEISS+ L H KL MC+ C S T
Sbjct: 2 PCLLCSRLNHILCRQSPELYEILFCSNQKSEISSMILYHIHGKLADGHKMCDDCLFSVTT 61
Query: 119 SNKSNAEAYRLLTGKLG-------------EESGSRFDHVPLLGEHTIAK--RCSCCGEQ 163
K NAE ++L G L +++ SR H+ G + R C +Q
Sbjct: 62 KTKCNAET-QILLGNLAWFLVVLVSKLWKSDQNSSRSIHLKSHGRVVLKPYIRFPCALKQ 120
Query: 164 WVLNSYDQKVVFNKSIGSGPADFDASDSVGNSFHEKRSSKPFVSVRDAPLRNNHVDPLSR 223
LN ++ ++ F S+ G+ + PLS
Sbjct: 121 SYLNHHN-------NLKKMRDKFPGSEGKGSFW-----------------------PLSH 150
Query: 224 VGYTELNITSDTESESEVPLSDDDKRCSK 252
VGYTE+ + S+ SES+ P +DD S+
Sbjct: 151 VGYTEVTLNSN--SESKFPFCNDDDDVSR 177
>Glyma05g27060.1
Length = 862
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 43 LSYVITKFAGYCKLQTPCLFCSRLDHVL--GKEKREYYRDLICSGHKSEISSLALCPAHD 100
SY+I KFA Y L+ PC++C+R+DH+L GK K +DL+C H SEIS L C H
Sbjct: 40 FSYLIIKFADYFGLKRPCIWCTRIDHILEPGKYKSSC-KDLVCEAHASEISKLGFCSNHH 98
Query: 101 KLVSLQGMCETCFLSYATSNKSNAE 125
KL Q MCE C S K N+E
Sbjct: 99 KLAESQDMCEDCSSSSQPDYKQNSE 123
>Glyma02g41240.1
Length = 1034
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 53/103 (51%), Gaps = 1/103 (0%)
Query: 14 HSLSRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKE 73
H + R+ L A +++ SY+IT FA LQ PCL+CSR+DHVL K+
Sbjct: 11 HRNTNRMVVILVYAVLEWLLIALLLLNSLFSYLITIFAKCVGLQPPCLWCSRVDHVLQKD 70
Query: 74 -KREYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLS 115
++DL+C H +EIS L C H +L MCE C S
Sbjct: 71 IATHLHKDLVCEAHAAEISKLGYCSNHQRLAETHSMCEDCLAS 113
>Glyma08g10040.1
Length = 920
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 70/155 (45%), Gaps = 20/155 (12%)
Query: 14 HSLSRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVL--G 71
H + ++T L A +++ SY+I KFA Y L+ PC++C+R+DH+L G
Sbjct: 11 HRNTNKITLVLVYAILEWILIILLLLNSLFSYLIIKFADYFGLKRPCIWCTRIDHILEPG 70
Query: 72 KEKREYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYATSNKSNAEAYRLLT 131
K K +DL+C H SEIS L C H KL Q M S + +
Sbjct: 71 KYKSS-CKDLVCEAHASEISKLGFCSNHHKLAESQDMYYVKL--------SQSFGFFPWM 121
Query: 132 GKLGEESGSRFDHVPLLGEHTIAK-----RCSCCG 161
++G G D G+ I K RCSCCG
Sbjct: 122 KQIGMIQGEGAD----AGDKAIVKVEEALRCSCCG 152
>Glyma09g21600.1
Length = 741
Score = 70.1 bits (170), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 52/104 (50%), Gaps = 1/104 (0%)
Query: 17 SRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEKRE 76
+ ++T L A ++ SY+I KF Y L+ PC++C+R+D ++ E +
Sbjct: 14 TNKITLVLVYAILEWILIFLLLLNSFFSYLIMKFVIYFGLKRPCIWCTRIDRIIEPENNK 73
Query: 77 -YYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYATS 119
RDL+C H EIS L C H KL + MCE C SY S
Sbjct: 74 GSCRDLVCEAHAFEISKLDFCLNHRKLAESETMCEDCSSSYKPS 117