Miyakogusa Predicted Gene

Lj0g3v0195199.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0195199.1 Non Chatacterized Hit- tr|K4A5P0|K4A5P0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034194,41.03,2e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.12340.1
         (520 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G08800.2 | Symbols:  | Protein of unknown function, DUF593 | ...   180   2e-45
AT1G08800.1 | Symbols:  | Protein of unknown function, DUF593 | ...   180   2e-45
AT2G30690.1 | Symbols:  | Protein of unknown function, DUF593 | ...   117   1e-26
AT1G74830.1 | Symbols:  | Protein of unknown function, DUF593 | ...    96   8e-20
AT1G18990.1 | Symbols:  | Protein of unknown function, DUF593 | ...    95   1e-19
AT5G16720.1 | Symbols:  | Protein of unknown function, DUF593 | ...    65   1e-10
AT1G70750.1 | Symbols:  | Protein of unknown function, DUF593 | ...    55   2e-07

>AT1G08800.2 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:2813578-2817078 REVERSE LENGTH=1113
          Length = 1113

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 192/375 (51%), Gaps = 68/375 (18%)

Query: 17  SRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEK-- 74
           SR  T+ALA A            +++ SYVI +FA Y +LQ+PCL CS LDH+L + K  
Sbjct: 3   SRSFTRALALAFNEWLLMFMLFVNSIFSYVIARFADYSELQSPCLMCSNLDHILRRTKDL 62

Query: 75  REYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKL 134
           ++ + D+ICS HKSEISSL  C AH KLV ++GMCETC  S+AT+NKSNAE YRLL GKL
Sbjct: 63  KKTHWDIICSKHKSEISSLVYCHAHGKLVDVRGMCETCLFSFATTNKSNAETYRLLVGKL 122

Query: 135 GEES--GSRFDH--VPLLGEHTIAKRCSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASD 190
           GE+S  GS+ D    P   + T    C+CC + W   +   +V          A+ +   
Sbjct: 123 GEDSHFGSKSDRSKYPNCSKLT---DCTCCNQLWTPQTAATQV----------AEREILP 169

Query: 191 SVGNSFHEKRSSKPFVSVRDAPLRNNHVDPLSRVGYTELNITSDTESESEVPLSDD---- 246
            +G    + R+ K     + AP ++   + L  VGYTEL I SDTESE+    SD     
Sbjct: 170 KIG-LLGKIRTGK-----QSAPKKSVSFNHLPDVGYTELKIHSDTESEA--VFSDTEPKQ 221

Query: 247 ---------------------DKRCSKPFVSVKDAPLRNNHVNPLSRVGYTELKITSDTE 285
                                D R  KP       P ++   N L  VGYTELKI SDTE
Sbjct: 222 ESSLNHLPPVGYNEPKIGLVGDVRTGKP-----STPKKSVSFNHLPDVGYTELKIHSDTE 276

Query: 286 SESEVPLSDDDGISIPIHGTDHTKEDIEVPCSHTEPSPIDLHEDLASGKSKTSASVLEPL 345
           SE+    S+D+   + +   DH  + +++    T P  I L  DLA+ K       LEP 
Sbjct: 277 SEA--VFSEDE--CVVLKDEDHKYQIVDL---QTHPI-ITLPYDLATDKLLNFDFPLEPF 328

Query: 346 LSKS---RTQLENTD 357
           ++++     QL+ T+
Sbjct: 329 VTRNDREEVQLQETN 343



 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 2/53 (3%)

Query: 470 LLDLGDAYKLAVSNRGRQLSGMLAEV--WTGKDSTRVSEDLKTLLSQFSATRG 520
           LLDL DAY + V N G   S    ++  W  KD++RVSEDLK LL+Q SA+RG
Sbjct: 777 LLDLADAYNIVVGNEGHYDSNGRQQIENWMKKDTSRVSEDLKALLTQISASRG 829


>AT1G08800.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:2813578-2817078 REVERSE LENGTH=1113
          Length = 1113

 Score =  180 bits (457), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 140/375 (37%), Positives = 192/375 (51%), Gaps = 68/375 (18%)

Query: 17  SRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEK-- 74
           SR  T+ALA A            +++ SYVI +FA Y +LQ+PCL CS LDH+L + K  
Sbjct: 3   SRSFTRALALAFNEWLLMFMLFVNSIFSYVIARFADYSELQSPCLMCSNLDHILRRTKDL 62

Query: 75  REYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKL 134
           ++ + D+ICS HKSEISSL  C AH KLV ++GMCETC  S+AT+NKSNAE YRLL GKL
Sbjct: 63  KKTHWDIICSKHKSEISSLVYCHAHGKLVDVRGMCETCLFSFATTNKSNAETYRLLVGKL 122

Query: 135 GEES--GSRFDH--VPLLGEHTIAKRCSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASD 190
           GE+S  GS+ D    P   + T    C+CC + W   +   +V          A+ +   
Sbjct: 123 GEDSHFGSKSDRSKYPNCSKLT---DCTCCNQLWTPQTAATQV----------AEREILP 169

Query: 191 SVGNSFHEKRSSKPFVSVRDAPLRNNHVDPLSRVGYTELNITSDTESESEVPLSDD---- 246
            +G    + R+ K     + AP ++   + L  VGYTEL I SDTESE+    SD     
Sbjct: 170 KIG-LLGKIRTGK-----QSAPKKSVSFNHLPDVGYTELKIHSDTESEA--VFSDTEPKQ 221

Query: 247 ---------------------DKRCSKPFVSVKDAPLRNNHVNPLSRVGYTELKITSDTE 285
                                D R  KP       P ++   N L  VGYTELKI SDTE
Sbjct: 222 ESSLNHLPPVGYNEPKIGLVGDVRTGKP-----STPKKSVSFNHLPDVGYTELKIHSDTE 276

Query: 286 SESEVPLSDDDGISIPIHGTDHTKEDIEVPCSHTEPSPIDLHEDLASGKSKTSASVLEPL 345
           SE+    S+D+   + +   DH  + +++    T P  I L  DLA+ K       LEP 
Sbjct: 277 SEA--VFSEDE--CVVLKDEDHKYQIVDL---QTHPI-ITLPYDLATDKLLNFDFPLEPF 328

Query: 346 LSKS---RTQLENTD 357
           ++++     QL+ T+
Sbjct: 329 VTRNDREEVQLQETN 343



 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 28/53 (52%), Positives = 35/53 (66%), Gaps = 2/53 (3%)

Query: 470 LLDLGDAYKLAVSNRGRQLSGMLAEV--WTGKDSTRVSEDLKTLLSQFSATRG 520
           LLDL DAY + V N G   S    ++  W  KD++RVSEDLK LL+Q SA+RG
Sbjct: 777 LLDLADAYNIVVGNEGHYDSNGRQQIENWMKKDTSRVSEDLKALLTQISASRG 829


>AT2G30690.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr2:13076229-13078595 FORWARD LENGTH=760
          Length = 760

 Score =  117 bits (294), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 112/220 (50%), Gaps = 32/220 (14%)

Query: 40  DAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGKEKREYYRDLICSGHKSEISSLALCPAH 99
           DA+LSY++  FA YC+LQ PC  CS+L H L      ++R L+C  H+SE+SS   C  H
Sbjct: 35  DALLSYLLVWFARYCRLQMPCFLCSKLLHPL------HWRFLLCRNHRSEVSSYMSCQNH 88

Query: 100 -DKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEE--SGSRFDHVPLLGEHTIAKR 156
            + L   +GMC+ C LS+      N +  RLL GKLG +  S S F H          + 
Sbjct: 89  GNNLADCRGMCDDCLLSFTKMTGPNPDMNRLLLGKLGYDLLSRSHFAH---------PRS 139

Query: 157 CSCCGEQWVLNSYDQKVVFNKSIGSGPADFDASDSVGNSFHEKR--SSKPFVSVRD--AP 212
           CSCC + W    + Q+++    +GS   +  +  ++    H  R  S      +RD  A 
Sbjct: 140 CSCCNKPWRTRHHTQRLI---RLGSRGRNSSSKPNIPAPRHLTRRGSGGSLKKMRDHIAT 196

Query: 213 LRNNHVDPLSR-----VGYTELNITSDTESESEVPLSDDD 247
             + +VD  SR     VGYTEL I SD  SESE   SDDD
Sbjct: 197 SGSEYVDVGSRDGMAHVGYTELKIHSD--SESEFLFSDDD 234


>AT1G74830.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:28113469-28115193 REVERSE LENGTH=542
          Length = 542

 Score = 95.5 bits (236), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 49/149 (32%), Positives = 77/149 (51%), Gaps = 26/149 (17%)

Query: 40  DAVLSYVITKFAGYCKLQTPCLFCSRLDHVL-GKEKREYYRDLICSGHKSEISSLALCPA 98
           D V++++  +FA +  L  PCL C+R+DH+L  ++ + YY + IC  HK ++SSLA C  
Sbjct: 56  DGVIAFLSNQFAKFFDLNIPCLLCTRIDHILVPRDPQFYYNESICDSHKKKVSSLAYCHV 115

Query: 99  HDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEESGSRFD---HVPL-------- 147
           H KL  ++ MCE C LS+AT   S+ + Y+ L G L ++     D    +PL        
Sbjct: 116 HKKLSEIKHMCEGCLLSFATEKDSDCDTYKSLIGILHKDLELLIDDERDLPLAFKKDDNL 175

Query: 148 --------------LGEHTIAKRCSCCGE 162
                         +   ++ + CSCCGE
Sbjct: 176 VQTTKNLVDYKTNNIKNDSLKQHCSCCGE 204


>AT1G18990.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr1:6558778-6560432 REVERSE LENGTH=524
          Length = 524

 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 83/172 (48%), Gaps = 28/172 (16%)

Query: 40  DAVLSYVITKFAGYCKLQTPCLFCSRLDHVL-GKEKREYYRDLICSGHKSEISSLALCPA 98
           D  L++   + A +  L+ PCL C+RLDHVL  +    YY D IC  HK  +SSLA C  
Sbjct: 37  DGFLAFFSNQIAKFFDLKIPCLLCTRLDHVLVSRNPDFYYNDSICDAHKKNVSSLAYCHV 96

Query: 99  HDKLVSLQGMCETCFLSYATSNKSNAEAYRLLTGKLGEE-----------------SGSR 141
           H KL  ++ MCE C LS+AT  +++ + Y+ L G L ++                 +GS+
Sbjct: 97  HKKLSEIKRMCEGCLLSFATEKETDVDTYKSLIGILHKDLELLIDDERELQLAFPVAGSK 156

Query: 142 FDHVPLLGEHTI---------AKRCSCCGEQWVLNSYDQKVVFNKSIGSGPA 184
            D      E+            +RCSCCG+   L S D+    N+S    P+
Sbjct: 157 KDENFYQVENRTNNSNDRFQRQQRCSCCGQIMKLKS-DKPKSNNQSFFGAPS 207


>AT5G16720.1 | Symbols:  | Protein of unknown function, DUF593 |
           chr5:5494309-5496562 FORWARD LENGTH=675
          Length = 675

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 30/98 (30%), Positives = 48/98 (48%), Gaps = 2/98 (2%)

Query: 17  SRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVLGK--EK 74
           + R+T  L  A            ++  +Y I KFA +  L+  CL C +LD +  +  E 
Sbjct: 14  TNRITVILVYAFLEWLLMFFIFLNSFFTYFIVKFASFFGLKQVCLLCPKLDRIFERKPEN 73

Query: 75  REYYRDLICSGHKSEISSLALCPAHDKLVSLQGMCETC 112
           R  Y++L+C  H +E++SL+ C  H KL     +C  C
Sbjct: 74  RFTYKELLCQNHIAELASLSFCRTHGKLSESANLCSDC 111


>AT1G70750.1 | Symbols:  | Protein of unknown function, DUF593 |
          chr1:26680728-26683147 REVERSE LENGTH=749
          Length = 749

 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 1/80 (1%)

Query: 14 HSLSRRVTKALASAXXXXXXXXXXXXDAVLSYVITKFAGYCKLQTPCLFCSRLDHVL-GK 72
          H  + R+T  L  A            +++ SY I +FA Y  L+ PCLFCSRLD      
Sbjct: 11 HRKTNRITLILVYAFLEWSLIFFILLNSLFSYFILRFADYFGLKRPCLFCSRLDRFFDAS 70

Query: 73 EKREYYRDLICSGHKSEISS 92
           K   +RDL+C  H  ++ S
Sbjct: 71 GKSPSHRDLLCDDHALQLHS 90