Miyakogusa Predicted Gene
- Lj0g3v0195199.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0195199.1 Non Chatacterized Hit- tr|K4A5P0|K4A5P0_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si034194,41.03,2e-18,seg,NULL; FAMILY NOT NAMED,NULL,CUFF.12340.1
(1560 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC63751 weakly similar to UniRef100_A7QVM8 Cluster: Chr... 1294 0.0
gnl|LJGI|FS331714 similar to UniRef100_A7PUP1 Cluster: Chromosom... 359 3e-98
>gnl|LJGI|TC63751 weakly similar to UniRef100_A7QVM8 Cluster: Chromosome chr14
scaffold_190, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr14 scaffold_190, whole
genome shotgun sequence - Vitis vinifera (Grape),
partial (30%)
Length = 906
Score = 1294 bits (653), Expect = 0.0
Identities = 653/653 (100%)
Strand = Plus / Plus
Query: 1 atggctaccgcgggagtctcatcttctgagtggcacaggcatagcctatccagacgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 atggctaccgcgggagtctcatcttctgagtggcacaggcatagcctatccagacgtgtt 313
Query: 61 accaaagccttggcttcagctttccttgaatggttgctaatctttttcctgtttattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 accaaagccttggcttcagctttccttgaatggttgctaatctttttcctgtttattgat 373
Query: 121 gctgttctatcttatgttattacaaagtttgccggttactgcaaattgcaaacgccgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gctgttctatcttatgttattacaaagtttgccggttactgcaaattgcaaacgccgtgc 433
Query: 181 ctgttctgctcaaggcttgatcatgttttaggcaaggagaaaagagaatactaccgggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 ctgttctgctcaaggcttgatcatgttttaggcaaggagaaaagagaatactaccgggac 493
Query: 241 ttgatttgtagtggtcataagtcagagatttcttctttagctctttgtcctgcacatgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 494 ttgatttgtagtggtcataagtcagagatttcttctttagctctttgtcctgcacatgat 553
Query: 301 aagcttgtaagccttcaaggaatgtgtgagacttgcttcctttcttatgctaccagcaat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 aagcttgtaagccttcaaggaatgtgtgagacttgcttcctttcttatgctaccagcaat 613
Query: 361 aaatccaatgcagaagcttaccggttgttgaccggtaaattgggggaggaatctggctcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 aaatccaatgcagaagcttaccggttgttgaccggtaaattgggggaggaatctggctcc 673
Query: 421 agatttgatcatgttccattacttggtgaacatacgattgcaaaacgctgttcttgttgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 agatttgatcatgttccattacttggtgaacatacgattgcaaaacgctgttcttgttgt 733
Query: 481 ggtgagcaatgggttttaaatagttatgaccaaaaggtggtatttaacaagtcaatcggg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 ggtgagcaatgggttttaaatagttatgaccaaaaggtggtatttaacaagtcaatcggg 793
Query: 541 tctggccctgctgattttgatgcatcagattctgttggaaacagttttcatgagaaaaga 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 tctggccctgctgattttgatgcatcagattctgttggaaacagttttcatgagaaaaga 853
Query: 601 agttcaaagccatttgtatcagtcagagatgcaccccttagaaacaatcatgt 653
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 854 agttcaaagccatttgtatcagtcagagatgcaccccttagaaacaatcatgt 906
Score = 87.7 bits (44), Expect = 2e-16
Identities = 59/64 (92%)
Strand = Plus / Plus
Query: 737 atgataaaagatgttcaaagccatttgtatcagtcaaagatgcacccctgagaaataatc 796
|||| |||||| |||||||||||||||||||||||| |||||||||||| ||||| ||||
Sbjct: 843 atgagaaaagaagttcaaagccatttgtatcagtcagagatgcaccccttagaaacaatc 902
Query: 797 atgt 800
||||
Sbjct: 903 atgt 906
>gnl|LJGI|FS331714 similar to UniRef100_A7PUP1 Cluster: Chromosome chr7 scaffold_31,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_31, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (4%)
Length = 493
Score = 359 bits (181), Expect = 3e-98
Identities = 181/181 (100%)
Strand = Plus / Plus
Query: 1 atggctaccgcgggagtctcatcttctgagtggcacaggcatagcctatccagacgtgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 atggctaccgcgggagtctcatcttctgagtggcacaggcatagcctatccagacgtgtt 372
Query: 61 accaaagccttggcttcagctttccttgaatggttgctaatctttttcctgtttattgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 accaaagccttggcttcagctttccttgaatggttgctaatctttttcctgtttattgat 432
Query: 121 gctgttctatcttatgttattacaaagtttgccggttactgcaaattgcaaacgccgtgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 433 gctgttctatcttatgttattacaaagtttgccggttactgcaaattgcaaacgccgtgc 492
Query: 181 c 181
|
Sbjct: 493 c 493