Miyakogusa Predicted Gene

Lj0g3v0188789.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0188789.1 Non Characterized Hit- tr|D8S6N7|D8S6N7_SELML
Putative uncharacterized protein OS=Selaginella
moelle,52.87,7e-19,Ribosomal_L37,Ribosomal protein L37, mitochondrial;
seg,NULL,CUFF.12023.1
         (131 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g078300.2 | ribosomal protein L37 | HC | chr6:29394357-293...   176   4e-45
Medtr6g078300.1 | ribosomal protein L37 | HC | chr6:29394329-293...   176   4e-45
Medtr4g073700.1 | ribosomal protein L37 | HC | chr4:27972645-279...   173   3e-44

>Medtr6g078300.2 | ribosomal protein L37 | HC |
           chr6:29394357-29391431 | 20130731
          Length = 131

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/132 (72%), Positives = 103/132 (78%), Gaps = 2/132 (1%)

Query: 1   MAMNYVRSVRHILT-TKEAVGVASKRAFATXXXXXXXXXXXXXXXXXXXXLSKEVKSSTV 59
           MAMN+VRSVR IL+ T EA+GVA +R FAT                    LSKEVK+STV
Sbjct: 1   MAMNHVRSVRSILSSTNEAIGVAYQRTFATGKAKKGKGGASADGPKESS-LSKEVKASTV 59

Query: 60  VGANILKEGSDPKILPDSEYPDWLWHLLDKRPALSELRRKNIETLSYEYLKRYVKLDNRA 119
           VG NILKEG+DPKILPDSEYPDWLWHLLDKRPALSELRRK I+TL YE LKRYVKLDNRA
Sbjct: 60  VGGNILKEGTDPKILPDSEYPDWLWHLLDKRPALSELRRKEIDTLPYEDLKRYVKLDNRA 119

Query: 120 RIKENNSLKAKN 131
           RIKENNSLKAKN
Sbjct: 120 RIKENNSLKAKN 131


>Medtr6g078300.1 | ribosomal protein L37 | HC |
           chr6:29394329-29391739 | 20130731
          Length = 131

 Score =  176 bits (447), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 96/132 (72%), Positives = 103/132 (78%), Gaps = 2/132 (1%)

Query: 1   MAMNYVRSVRHILT-TKEAVGVASKRAFATXXXXXXXXXXXXXXXXXXXXLSKEVKSSTV 59
           MAMN+VRSVR IL+ T EA+GVA +R FAT                    LSKEVK+STV
Sbjct: 1   MAMNHVRSVRSILSSTNEAIGVAYQRTFATGKAKKGKGGASADGPKESS-LSKEVKASTV 59

Query: 60  VGANILKEGSDPKILPDSEYPDWLWHLLDKRPALSELRRKNIETLSYEYLKRYVKLDNRA 119
           VG NILKEG+DPKILPDSEYPDWLWHLLDKRPALSELRRK I+TL YE LKRYVKLDNRA
Sbjct: 60  VGGNILKEGTDPKILPDSEYPDWLWHLLDKRPALSELRRKEIDTLPYEDLKRYVKLDNRA 119

Query: 120 RIKENNSLKAKN 131
           RIKENNSLKAKN
Sbjct: 120 RIKENNSLKAKN 131


>Medtr4g073700.1 | ribosomal protein L37 | HC |
           chr4:27972645-27969006 | 20130731
          Length = 131

 Score =  173 bits (439), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 87/131 (66%), Positives = 99/131 (75%)

Query: 1   MAMNYVRSVRHILTTKEAVGVASKRAFATXXXXXXXXXXXXXXXXXXXXLSKEVKSSTVV 60
           M MN+ RSVR IL+TK AV V  +R FAT                    LSKEVK+STVV
Sbjct: 1   MLMNHARSVRRILSTKVAVSVVCQRTFATGKAKKGSKGVGPSDALKASTLSKEVKASTVV 60

Query: 61  GANILKEGSDPKILPDSEYPDWLWHLLDKRPALSELRRKNIETLSYEYLKRYVKLDNRAR 120
           GANILK+G+DPKILP+S+YPDWL  L+DKRPALSELRRKN++TL YE LKRYVKLDNRA+
Sbjct: 61  GANILKDGTDPKILPNSKYPDWLCQLIDKRPALSELRRKNVDTLLYEDLKRYVKLDNRAK 120

Query: 121 IKENNSLKAKN 131
           IKENNSLKAKN
Sbjct: 121 IKENNSLKAKN 131