Miyakogusa Predicted Gene

Lj0g3v0175329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0175329.1 tr|B9N719|B9N719_POPTR Plant synaptotagmin
OS=Populus trichocarpa GN=NTMC2T2.2 PE=4 SV=1,54.22,2e-19,C2 domain
(Calcium/lipid-binding domain, CaLB),C2 calcium/lipid-binding domain,
CaLB; C2,C2 calcium-,NODE_43372_length_482_cov_162.593369.path3.1
         (83 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma17g11800.1                                                       103   6e-23
Glyma06g07030.1                                                        64   5e-11

>Glyma17g11800.1 
          Length = 558

 Score =  103 bits (256), Expect = 6e-23,   Method: Composition-based stats.
 Identities = 54/82 (65%), Positives = 62/82 (75%), Gaps = 1/82 (1%)

Query: 1   MKNSFTNPLAPNCSMASLEEVCXXXXXXXXXXXXXXXVTEREKEVIIRGILSVTVISAED 60
           M+NSFTNP APN SM SLE+V                VT+++KEVIIRG+LSVTVISAED
Sbjct: 386 MENSFTNPFAPNYSMTSLEKV-LKNANGVESNGNENAVTQKKKEVIIRGVLSVTVISAED 444

Query: 61  LPALDFMGKSDPFVVLTLRKAK 82
           LPA DFMGKSDPFVVLTL+KA+
Sbjct: 445 LPATDFMGKSDPFVVLTLKKAE 466


>Glyma06g07030.1 
          Length = 564

 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 32/75 (42%), Positives = 45/75 (60%), Gaps = 2/75 (2%)

Query: 1   MKNSFTNPLAPNCSMASLEEVCXXXXXXXXXXXXXXXVTEREKEVIIRGILSVTVISAED 60
           ++++  NP  P+ S+ + E+                  + R   VI+RG+LSVTVISAED
Sbjct: 393 VESAIRNPFDPDFSLTTFEKTLKSGTGDAEAEDLIG--SRRRNNVIVRGVLSVTVISAED 450

Query: 61  LPALDFMGKSDPFVV 75
           LPA+D MGK+DPFVV
Sbjct: 451 LPAVDLMGKADPFVV 465