Miyakogusa Predicted Gene

Lj0g3v0175329.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0175329.1 tr|B9N719|B9N719_POPTR Plant synaptotagmin
OS=Populus trichocarpa GN=NTMC2T2.2 PE=4 SV=1,54.22,2e-19,C2 domain
(Calcium/lipid-binding domain, CaLB),C2 calcium/lipid-binding domain,
CaLB; C2,C2 calcium-,NODE_43372_length_482_cov_162.593369.path3.1
         (83 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g115660.1 | calcium-dependent lipid-binding (CaLB domain) ...   101   2e-22
Medtr3g106660.1 | calcium-dependent lipid-binding (CaLB domain) ...    65   1e-11

>Medtr4g115660.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein | HC | chr4:47788220-47795661 | 20130731
          Length = 566

 Score =  101 bits (251), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 51/81 (62%), Positives = 59/81 (72%)

Query: 2   KNSFTNPLAPNCSMASLEEVCXXXXXXXXXXXXXXXVTEREKEVIIRGILSVTVISAEDL 61
           +NSFTNP A N SM SLE+V                  +R+KEVIIRG+LSVTVISAEDL
Sbjct: 394 ENSFTNPFARNYSMTSLEKVLKGSSNGIDSNGNESEAAQRKKEVIIRGVLSVTVISAEDL 453

Query: 62  PALDFMGKSDPFVVLTLRKAK 82
           PA+DFMGKSDPFVVLTL+KA+
Sbjct: 454 PAVDFMGKSDPFVVLTLKKAE 474


>Medtr3g106660.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein | HC | chr3:49295362-49289363 | 20130731
          Length = 565

 Score = 65.1 bits (157), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 29/38 (76%), Positives = 36/38 (94%)

Query: 45  VIIRGILSVTVISAEDLPALDFMGKSDPFVVLTLRKAK 82
           VI+RG+LSVTVISAEDLP +DFMGK+DPFVVL L+K++
Sbjct: 436 VIVRGVLSVTVISAEDLPIVDFMGKADPFVVLALKKSE 473