Miyakogusa Predicted Gene

Lj0g3v0175329.1

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0175329.1 tr|B9N719|B9N719_POPTR Plant synaptotagmin
OS=Populus trichocarpa GN=NTMC2T2.2 PE=4 SV=1,54.22,2e-19,C2 domain
(Calcium/lipid-binding domain, CaLB),C2 calcium/lipid-binding domain,
CaLB; C2,C2 calcium-,NODE_43372_length_482_cov_162.593369.path3.1
         (250 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome...   299   4e-81
gnl|LJGI|FS347281 similar to UniRef100_A7QTN2 Cluster: Chromosom...   293   3e-79
gnl|LJGI|TC60960 weakly similar to UniRef100_A7P5W5 Cluster: Chr...   196   4e-50
gnl|LJGI|TC59047 weakly similar to UniRef100_A7QTN2 Cluster: Chr...   186   4e-47
gnl|LJGI|TC59476 similar to UniRef100_A7QTN2 Cluster: Chromosome...   180   3e-45
gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome...   135   1e-31

>gnl|LJGI|TC75043 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr11 scaffold_170, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (95%)
          Length = 2668

 Score =  299 bits (151), Expect = 4e-81
 Identities = 217/239 (90%)
 Strand = Plus / Plus

                                                                        
Query: 5    agaatagctttaccaacccacttgctcccaactgctcaatggcatccttggaagaggttt 64
            |||||||||||||||| ||| |||||||||||| ||||||| ||||||||||| ||||| 
Sbjct: 1835 agaatagctttaccaatccatttgctcccaactactcaatgacatccttggaaaaggttc 1894

                                                                        
Query: 65   gtgaaggatcagcaaatggaatagaggctaatggaaatgagaatgcagttacagagaggg 124
             | || | ||| |||||||||||||||||||||||||||| ||||||| |||| ||| | 
Sbjct: 1895 ttaaaagttcaacaaatggaatagaggctaatggaaatgaaaatgcagctacacagaaga 1954

                                                                        
Query: 125  aaaaagaggttattattagaggaatcctttctgttactgtgatatctgctgaagacttgc 184
            |||| |||||||||||||||||| | ||||||||||||||||||||||||||||| ||||
Sbjct: 1955 aaaaggaggttattattagaggagttctttctgttactgtgatatctgctgaagaattgc 2014

                                                                       
Query: 185  ctgcattggatttcatgggaaaatctgatccctttgttgttctgaccttgaggaaagca 243
            ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2015 ctgcagtagatttcatgggaaaatctgatccctttgttgttctgaccttgaggaaagca 2073


>gnl|LJGI|FS347281 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (22%)
          Length = 709

 Score =  293 bits (148), Expect = 3e-79
 Identities = 151/152 (99%)
 Strand = Plus / Minus

                                                                       
Query: 96  tggaaatgagaatgcagttacagagagggaaaaagaggttattattagaggaatcctttc 155
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 tggaaatgagaatgcagttacagagagggaaaaagaggttattattagaggaatcctttc 650

                                                                       
Query: 156 tgttactgtgatatctgctgaagacttgcctgcattggatttcatgggaaaatctgatcc 215
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 649 tgttactgtgatatctgctgaagacttgcctggattggatttcatgggaaaatctgatcc 590

                                           
Query: 216 ctttgttgttctgaccttgaggaaagcaaaat 247
           ||||||||||||||||||||||||||||||||
Sbjct: 589 ctttgttgttctgaccttgaggaaagcaaaat 558


>gnl|LJGI|TC60960 weakly similar to UniRef100_A7P5W5 Cluster: Chromosome chr4
           scaffold_6, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr4 scaffold_6, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (7%)
          Length = 886

 Score =  196 bits (99), Expect = 4e-50
 Identities = 134/145 (92%), Gaps = 3/145 (2%)
 Strand = Plus / Plus

                                                                       
Query: 106 aatgcagttacagagagggaaaaagaggttattattagaggaa---tcctttctgttact 162
           |||||||||||| | | | |||||||||||||| ||||||||    ||||||||||||||
Sbjct: 712 aatgcagttacacacaagaaaaaagaggttattgttagaggaggattcctttctgttact 771

                                                                       
Query: 163 gtgatatctgctgaagacttgcctgcattggatttcatgggaaaatctgatccctttgtt 222
           ||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 772 gtgatatctgctgaaaacttgcctgcattggatttaatgggaaaatctgatccctttgtt 831

                                    
Query: 223 gttctgaccttgaggaaagcaaaat 247
           |||||||||||||||||||||||||
Sbjct: 832 gttctgaccttgaggaaagcaaaat 856


>gnl|LJGI|TC59047 weakly similar to UniRef100_A7QTN2 Cluster: Chromosome chr11
           scaffold_170, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr11 scaffold_170, whole
           genome shotgun sequence - Vitis vinifera (Grape),
           partial (8%)
          Length = 760

 Score =  186 bits (94), Expect = 4e-47
 Identities = 115/122 (94%)
 Strand = Plus / Plus

                                                                       
Query: 126 aaaagaggttattattagaggaatcctttctgttactgtgatatctgctgaagacttgcc 185
           ||||||||||||| |||||||||  ||||||||||||||||||||||||||| |||| ||
Sbjct: 639 aaaagaggttattgttagaggaaatctttctgttactgtgatatctgctgaaaacttacc 698

                                                                       
Query: 186 tgcattggatttcatgggaaaatctgatccctttgttgttctgaccttgaggaaagcaaa 245
           |||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 699 tgcattggatttcatgagaaaatctgatccctatgttgttctgaccttgaggaaagcaaa 758

             
Query: 246 at 247
           ||
Sbjct: 759 at 760


>gnl|LJGI|TC59476 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (17%)
          Length = 757

 Score =  180 bits (91), Expect = 3e-45
 Identities = 103/107 (96%)
 Strand = Plus / Plus

                                                                       
Query: 144 aggaatcctttctgttactgtgatatctgctgaagacttgcctgcattggatttcatggg 203
           |||| ||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 158 aggagtcctttccgttactgtgatatctgctgaagacttgcctgcattggatttaatgag 217

                                                          
Query: 204 aaaatctgatccctttgttgttctgaccttgaggaaagcaaaattaa 250
           |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 218 aaaatctgatccctttgttgttctgaccttgaggaaagcaaaattaa 264


>gnl|LJGI|TC61568 similar to UniRef100_A7QTN2 Cluster: Chromosome chr11 scaffold_170,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr11 scaffold_170, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (25%)
          Length = 1227

 Score =  135 bits (68), Expect = 1e-31
 Identities = 95/104 (91%)
 Strand = Plus / Plus

                                                                       
Query: 144 aggaatcctttctgttactgtgatatctgctgaagacttgcctgcattggatttcatggg 203
           |||| |||||| |||||||||||||||||||||| ||||||||||||   ||||||||||
Sbjct: 632 aggagtcctttatgttactgtgatatctgctgaaaacttgcctgcatcacatttcatggg 691

                                                       
Query: 204 aaaatctgatccctttgttgttctgaccttgaggaaagcaaaat 247
           |||  ||||||| |||||||||||||||||||||||||||||||
Sbjct: 692 aaaccctgatccatttgttgttctgaccttgaggaaagcaaaat 735