Miyakogusa Predicted Gene

Lj0g3v0173969.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0173969.1 Non Chatacterized Hit- tr|D8TT29|D8TT29_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,31.03,0.000000000002, ,CUFF.10926.1
         (144 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G58100.1 | Symbols:  | unknown protein; INVOLVED IN: pollen e...   184   1e-47

>AT5G58100.1 | Symbols:  | unknown protein; INVOLVED IN: pollen
           exine formation; EXPRESSED IN: 19 plant structures;
           EXPRESSED DURING: 8 growth stages; BEST Arabidopsis
           thaliana protein match is: unknown protein
           (TAIR:AT3G28720.1); Has 35333 Blast hits to 34131
           proteins in 2444 species: Archae - 798; Bacteria -
           22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses
           - 0; Other Eukaryotes - 9610 (source: NCBI BLink). |
           chr5:23507828-23514863 FORWARD LENGTH=945
          Length = 945

 Score =  184 bits (468), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 86/145 (59%), Positives = 112/145 (77%), Gaps = 1/145 (0%)

Query: 1   MNFIFIGFEGKGNQEFKLLPEEIERWFTKIDHIFEHTRIRQ-EDVISAFYKTSAGKMQRH 59
           +NFIFIGFEGKGNQ+FKL PEE+ERWF K+DH+FEHTR+ Q ++V++ FYK +  K  +H
Sbjct: 106 VNFIFIGFEGKGNQDFKLRPEELERWFNKLDHMFEHTRVPQIKEVLNPFYKINIEKEVQH 165

Query: 60  HLPVASHINYNFSVHAIEMGEKVTSIFERALNVFGRKNNPLGSGDNDVGDWQVDVDMIDG 119
           HLP+ S +NYNFSVHAI+MGEKVTS+ E A+ V  RK++   + D +    QVD +M++ 
Sbjct: 166 HLPIISRVNYNFSVHAIQMGEKVTSVIEHAIKVLARKDDVATNKDEESALLQVDAEMMEF 225

Query: 120 VLTSLVEYLQLEKAYNIFILNPKRD 144
           + TSLVEY  LE AYN+FILNPK D
Sbjct: 226 IFTSLVEYFHLEDAYNLFILNPKHD 250