Miyakogusa Predicted Gene

Lj0g3v0164179.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0164179.1 Non Chatacterized Hit- tr|B9EZQ4|B9EZQ4_ORYSJ
Putative uncharacterized protein OS=Oryza sativa
subsp,44.09,3e-18,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.10271.1
         (287 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT4G28300.1 | Symbols:  | Protein of unknown function (DUF1421) ...   148   4e-36
AT4G28300.2 | Symbols:  | Protein of unknown function (DUF1421) ...   138   4e-33
AT3G01560.1 | Symbols:  | Protein of unknown function (DUF1421) ...    62   6e-10
AT5G14540.1 | Symbols:  | Protein of unknown function (DUF1421) ...    58   8e-09

>AT4G28300.1 | Symbols:  | Protein of unknown function (DUF1421) |
           chr4:14014860-14016823 FORWARD LENGTH=496
          Length = 496

 Score =  148 bits (374), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 86/171 (50%), Positives = 113/171 (66%), Gaps = 13/171 (7%)

Query: 58  VITPNSTQDFDQTRAERTLIFPDTSYNPPEDSSSQDAIATVEKNMKKYVDNLMRFLEGIS 117
           +   NS ++F +TR  R+ +FP +SY+PPEDS SQD   TVE+ MK Y DN+MRFLEG+S
Sbjct: 45  IAASNSNKEFHKTRMARSSVFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLEGLS 104

Query: 118 SKLSQLELHYYNLDQSIGEMKSELNFNLGEQYSKLKSLEKHLQEIHSSEQVLR------- 170
           S+LSQLEL+ YNLD++IGEM+SEL     +   KL+SL+KHLQE+H S Q+LR       
Sbjct: 105 SRLSQLELYCYNLDKTIGEMRSELTHAHEDADVKLRSLDKHLQEVHRSVQILRDKQELAD 164

Query: 171 -----VKPQLAQKESSSLRHSLSNEDRSPS-TKYAKKTDNASDAPNRWISF 215
                 K QL QKESSS  HS   EDR  +     KK++N SDA N+ ++ 
Sbjct: 165 TQKELAKLQLVQKESSSSSHSQHGEDRVATPVPEPKKSENTSDAHNQQLAL 215


>AT4G28300.2 | Symbols:  | Protein of unknown function (DUF1421) |
           chr4:14015414-14016823 FORWARD LENGTH=438
          Length = 438

 Score =  138 bits (348), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 81/155 (52%), Positives = 104/155 (67%), Gaps = 13/155 (8%)

Query: 74  RTLIFPDTSYNPPEDSSSQDAIATVEKNMKKYVDNLMRFLEGISSKLSQLELHYYNLDQS 133
           R+ +FP +SY+PPEDS SQD   TVE+ MK Y DN+MRFLEG+SS+LSQLEL+ YNLD++
Sbjct: 3   RSSVFPTSSYSPPEDSLSQDITDTVERTMKMYADNMMRFLEGLSSRLSQLELYCYNLDKT 62

Query: 134 IGEMKSELNFNLGEQYSKLKSLEKHLQEIHSSEQVLR------------VKPQLAQKESS 181
           IGEM+SEL     +   KL+SL+KHLQE+H S Q+LR             K QL QKESS
Sbjct: 63  IGEMRSELTHAHEDADVKLRSLDKHLQEVHRSVQILRDKQELADTQKELAKLQLVQKESS 122

Query: 182 SLRHSLSNEDR-SPSTKYAKKTDNASDAPNRWISF 215
           S  HS   EDR +      KK++N SDA N+ ++ 
Sbjct: 123 SSSHSQHGEDRVATPVPEPKKSENTSDAHNQQLAL 157


>AT3G01560.1 | Symbols:  | Protein of unknown function (DUF1421) |
           chr3:219884-221707 FORWARD LENGTH=511
          Length = 511

 Score = 61.6 bits (148), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 29/93 (31%), Positives = 59/93 (63%), Gaps = 2/93 (2%)

Query: 98  VEKNMKKYVDNLMRFLEGISSKLSQLELHYYNLDQSIGEMKSELNFNLGEQYSKLKSLEK 157
           +++ MKK+ D L+  +EG+S++LSQLE   +NL+  + ++K  ++ + G    K++ L+ 
Sbjct: 134 IDRTMKKHTDTLLHVMEGVSARLSQLETRTHNLENLVDDLKVSVDNSHGSTDGKMRQLKN 193

Query: 158 HLQEIHSSEQVLRVKPQLAQKESSSLRHSLSNE 190
            L E+ S  Q+L+ K ++ + + S  +H +SN+
Sbjct: 194 ILVEVQSGVQLLKDKQEILEAQLS--KHQVSNQ 224


>AT5G14540.1 | Symbols:  | Protein of unknown function (DUF1421) |
           chr5:4687333-4689624 REVERSE LENGTH=547
          Length = 547

 Score = 57.8 bits (138), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 68/124 (54%), Gaps = 4/124 (3%)

Query: 73  ERTLIFPDTSYNPPEDSSSQDAIATVEKNMKKYVDNLMRFLEGISSKLSQLELHYYNLDQ 132
           E + +F +   N PE +     I+ +++ MK + D L+  +EG+S++L+QLE    +L+ 
Sbjct: 109 EPSKLFAEKDRNSPESA----IISAIDRTMKAHADKLLHVMEGVSARLTQLETRTRDLEN 164

Query: 133 SIGEMKSELNFNLGEQYSKLKSLEKHLQEIHSSEQVLRVKPQLAQKESSSLRHSLSNEDR 192
            + ++K  +  + G+   KL+ LE  + E+ +  Q+L+ K ++ + +    +  LS  ++
Sbjct: 165 LVDDVKVSVGNSHGKTDGKLRQLENIMLEVQNGVQLLKDKQEIVEAQLQLSKLQLSKVNQ 224

Query: 193 SPST 196
            P T
Sbjct: 225 QPET 228