Miyakogusa Predicted Gene
- Lj0g3v0160799.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0160799.1 tr|G7KFP7|G7KFP7_MEDTR DNA-binding protein
SMUBP-2 OS=Medicago truncatula GN=MTR_5g076380 PE=4
SV=1,56.3,0,SUBFAMILY NOT NAMED,NULL; DNA2/NAM7 HELICASE FAMILY,NULL;
P-loop containing nucleoside triphosphate ,CUFF.9978.1
(332 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase super... 354 6e-98
Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase super... 347 8e-96
Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase super... 340 1e-93
Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase super... 327 1e-89
Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase super... 310 1e-84
Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase super... 305 4e-83
Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase super... 292 3e-79
Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase super... 279 3e-75
Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase super... 252 3e-67
Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase supe... 177 1e-44
Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase super... 163 2e-40
Medtr3g078040.1 | hypothetical protein | LC | chr3:35164793-3516... 114 2e-25
Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC | chr7:365184... 55 1e-07
Medtr5g013820.1 | regulator of nonsense transcripts protein | HC... 52 9e-07
Medtr5g013820.2 | regulator of nonsense transcripts protein | HC... 52 1e-06
>Medtr5g076380.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32566132-32571914 |
20130731
Length = 885
Score = 354 bits (909), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 188/335 (56%), Positives = 242/335 (72%), Gaps = 31/335 (9%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEVS----DLRSNHNKLY 57
IT IRP+S++DLN S Y+I Y+ G K+ F+D+++VLSSKC+++ ++N K+Y
Sbjct: 126 ITYIRPKSLNDLNTLNSPYHIAYLNGGKNRFSDRITVLSSKCMKMDVDTLSRKNNTQKMY 185
Query: 58 AIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQASLII 117
+Y+MN+TTN RIWKAL+S+ KG ++NII++VLQP N+ GENC+IC+SG N QAS I
Sbjct: 186 VVYIMNMTTNVRIWKALHSKSKGDHLNIIEKVLQP--NLNSGENCKICMSGSNSQASFIT 243
Query: 118 PGIIRSQNLNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKLEART 177
IIRSQNLNESQ+DAV+SCV M++C+H NTKLIWGPPGTGKTKTVACLLFSL+KL++RT
Sbjct: 244 KDIIRSQNLNESQQDAVTSCVRMVDCSHANTKLIWGPPGTGKTKTVACLLFSLLKLKSRT 303
Query: 178 LTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYR 237
LTCAPTNTA++QVA RL SLVT S +++TYGLGDIVLFGN RMKVDSY GLED+FLDYR
Sbjct: 304 LTCAPTNTAILQVAIRLHSLVTDSLDHDTYGLGDIVLFGNGKRMKVDSYPGLEDIFLDYR 363
Query: 238 VKSLLKCLTGWKHDFESMILLLQEPRKQYLLLHGNEKGLVSLEESAVEKDKGNDLLSTPL 297
VK+L++C W H ++I L +P KQY L DK +D L+
Sbjct: 364 VKNLMQCYAEWNHSLVAIIEFLSDPSKQYFLEM---------------YDKYDDSLT--F 406
Query: 298 MGYVWKKLKEFTWQYQLESPKEKICIITIEQFVKQ 332
GYV + K+ YQ I+T+EQFVKQ
Sbjct: 407 EGYVKRARKDIIELYQ--------SIMTMEQFVKQ 433
>Medtr5g076500.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32648280-32643985 |
20130731
Length = 857
Score = 347 bits (890), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 186/335 (55%), Positives = 240/335 (71%), Gaps = 38/335 (11%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKC----IEVSDLRSNHNKLY 57
IT I+P+S++DLN S Y+I YV G+K+ F+ +++VLSSKC +E +++N K+Y
Sbjct: 130 ITYIKPKSLNDLNTLNSPYHIAYVNGAKNRFSGRITVLSSKCMKMDVESVSMKNNTQKMY 189
Query: 58 AIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQASLII 117
A+Y+MN+TTN RIWKAL+S+ KG ++NII++VLQP + GENC+IC+S N +AS I
Sbjct: 190 AVYIMNMTTNVRIWKALDSKSKGDHLNIIEKVLQP--GLISGENCKICMSRSNSKASFIT 247
Query: 118 PGIIRSQNLNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKLEART 177
IIRSQNLNESQ+DAV+SC +M++C+H NTKLIWGPPGTGKTKTVACLLFSL+KL++RT
Sbjct: 248 KDIIRSQNLNESQQDAVTSCASMVDCSHANTKLIWGPPGTGKTKTVACLLFSLLKLKSRT 307
Query: 178 LTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYR 237
LTCAPTNTA++QVA RL SLVT S +++TYGLGDIVLFGN RMKVDS GLED+FLDYR
Sbjct: 308 LTCAPTNTAILQVAIRLHSLVTDSPDHDTYGLGDIVLFGNGKRMKVDSCPGLEDIFLDYR 367
Query: 238 VKSLLKCLTGWKHDFESMILLLQEPRKQYLLLHGNEKGLVSLEESAVEKDKGNDLLSTPL 297
VK+L++C T W H FE+MI L +PR DK +D L+
Sbjct: 368 VKNLMQCYTEWNHSFEAMIKFLSDPR----------------------YDKYDDSLT--F 403
Query: 298 MGYVWKKLKEFTWQYQLESPKEKICIITIEQFVKQ 332
GYV + KE YQ I+T+EQFVKQ
Sbjct: 404 EGYVKRARKEIMELYQ--------SIMTMEQFVKQ 430
>Medtr5g076440.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32616775-32612603 |
20130731
Length = 917
Score = 340 bits (872), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 183/347 (52%), Positives = 238/347 (68%), Gaps = 21/347 (6%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEVSDLRSNHNK-LYAIY 60
T+ RP+ V+DL Y I YV K + ++ +LSSKCI SD R +H K +YA+Y
Sbjct: 134 FTDHRPKRVNDLKTQRCPYIIAYVIAPKDDISGEILILSSKCIFESDYRKDHTKKMYAVY 193
Query: 61 LMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQASLIIPGI 120
LMN+TTN RIWK LNSQ +G +++IIK+VL+P N GE+C++CLSG N +A LI I
Sbjct: 194 LMNMTTNVRIWKGLNSQTEGEHLDIIKKVLRPCLN--SGESCKLCLSGSNSEAFLIKEDI 251
Query: 121 IRSQNLNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKLEARTLTC 180
I SQNLNESQEDAVSSCV MINC H N KLIWGPPGTGKTKTVACLLFSL KL+ RTLTC
Sbjct: 252 IHSQNLNESQEDAVSSCVGMINCCHANIKLIWGPPGTGKTKTVACLLFSLFKLKTRTLTC 311
Query: 181 APTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYRVKS 240
APTNTA++QVATR+ SLV S E++TYGLGDIVLFGN RMK+DSY GL D+FLDYRV++
Sbjct: 312 APTNTAILQVATRIHSLVMDSVEHDTYGLGDIVLFGNNKRMKLDSYPGLGDIFLDYRVRN 371
Query: 241 LLKC---LTGWKHDFESMILLLQEPRKQYL--LLHGNEKGLV----SLEESAVEKDKGND 291
L++C LTGWK ESM L++P+K+YL + H + + V S E + E DK +
Sbjct: 372 LMQCFSPLTGWKQTLESMTQFLKDPKKEYLSQIDHKSLEEFVNEKHSEEYRSDEIDKVEN 431
Query: 292 LLSTPLMGYVWKKLKEFTWQYQL-------ESPKEKICIITIEQFVK 331
++ +V K+ +E + + + PK I + T+++ +
Sbjct: 432 FMT--FEQFVKKRFRELSEKLKFLIQTLYTHLPKSFISLATVKKMFR 476
>Medtr3g064190.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28858780-28854927 |
20130731
Length = 906
Score = 327 bits (837), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 174/307 (56%), Positives = 228/307 (74%), Gaps = 24/307 (7%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEV----SDLRSNHN-KL 56
+T+ +P++V+DLNRP YY+I YV GSK + ++S+LSSKCI++ + LRSN+ KL
Sbjct: 127 LTDFKPKTVEDLNRPRRYYHIAYVYGSKES-SGEISILSSKCIDMEVDSNYLRSNNAPKL 185
Query: 57 YAIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENP---QA 113
YA+YL+NLTTN RIWKALNS+ +G MN+IK+VLQ DSN GENCQ+C+ GEN A
Sbjct: 186 YAVYLLNLTTNIRIWKALNSELEGAKMNMIKKVLQADSN--NGENCQLCIYGENHIDIAA 243
Query: 114 SLIIPGIIRSQNLNESQEDAVSSCVNMINCNHNNT-KLIWGPPGTGKTKTVACLLFSLVK 172
+ +I+S+NLNESQ+DAV S V+M C+H++T KLIWGPPGTGKTKTVA LLFSL+K
Sbjct: 244 CSKVHTMIQSENLNESQKDAVLSSVSMRECHHSDTIKLIWGPPGTGKTKTVASLLFSLLK 303
Query: 173 LEARTLTCAPTNTAVIQVATRLLSLVTSSNEY--ETYGLGDIVLFGNKTRMKVDSYEGLE 230
+ARTLTCAPTNTAV++VA RL +LV S E+ +TYGLGDIV+FGN++RMKVD Y L+
Sbjct: 304 FKARTLTCAPTNTAVLEVAARLQNLVEKSLEHDVDTYGLGDIVIFGNRSRMKVDCYRCLQ 363
Query: 231 DVFLDYRVKSLLKC---LTGWKHDFESMILLLQEPRKQYLLLHGNEKGLVSLEESAVEKD 287
D+FLDYRV +LL+C TGWKH ESMI LL+ P K+Y V E + ++D
Sbjct: 364 DIFLDYRVSNLLRCFAPFTGWKHYLESMIALLENPSKKY-------AQFVKKEYHSYKED 416
Query: 288 KGNDLLS 294
K N +++
Sbjct: 417 KKNSIMT 423
>Medtr5g076310.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32527815-32524102 |
20130731
Length = 860
Score = 310 bits (794), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 168/271 (61%), Positives = 195/271 (71%), Gaps = 10/271 (3%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEVSDLRSNHN----KLY 57
TNIRP+S+DDLN S Y+I YV K F+D VSVLSSKC++ N KLY
Sbjct: 133 FTNIRPKSLDDLNTLKSPYHIGYVDRPKKRFSDMVSVLSSKCLKTDTEHDFGNREEPKLY 192
Query: 58 AIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQASLII 117
A+YLMN+TTN RI ALNS +G ++NIIK VL P ++ GENCQ CLS EN QAS
Sbjct: 193 AVYLMNMTTNLRISNALNSPSEGEHLNIIKTVLGP--HLISGENCQNCLSEENCQASFTK 250
Query: 118 PG-IIRSQNLNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKLEAR 176
IIRSQ LNESQEDAVSS NMINCNH+N KLIWGPPGTGKTKTVACLLFSL++L+ R
Sbjct: 251 EDMIIRSQKLNESQEDAVSSSANMINCNHSNVKLIWGPPGTGKTKTVACLLFSLLELKTR 310
Query: 177 TLTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDY 236
TLTCAPTNTAV+QVA RL LV S E ETYGLGDIVLFGN RMK+ S+ GL D+FLD
Sbjct: 311 TLTCAPTNTAVLQVAIRLHRLVMDSLELETYGLGDIVLFGNSKRMKLSSHPGLVDIFLDN 370
Query: 237 RVKSLLKCL---TGWKHDFESMILLLQEPRK 264
RV++L +C GW+ + SMI LL+ K
Sbjct: 371 RVENLKRCFDSNIGWETNLRSMIRLLKSMEK 401
>Medtr5g076330.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32541203-32546485 |
20130731
Length = 898
Score = 305 bits (781), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 162/290 (55%), Positives = 212/290 (73%), Gaps = 11/290 (3%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEVSDLRSNHNKLYAIYL 61
TNIRP+SVDDL+R Y +I Y+ GSK FTD++ +L S E R+ KLYA+ L
Sbjct: 120 FTNIRPRSVDDLSRIKRYCHIAYIHGSKDEFTDEIPILLS--YEFDLKRNKAQKLYAVCL 177
Query: 62 MNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGEN-PQASLIIPGI 120
+N+TTN RIWKALNS+ +G +MNII++VLQP S R +NCQ CLSG N +++ + I
Sbjct: 178 INMTTNVRIWKALNSEMEGSDMNIIQKVLQPYS--RMEQNCQTCLSGVNLGRSNSRVKTI 235
Query: 121 IRSQNLNESQEDAVSSCVNMINCNHNN-TKLIWGPPGTGKTKTVACLLFSLVKLEARTLT 179
I++QNLNESQ+DA+ SC++M C+HN+ KLIWGPPGTGKTKTVA +LF L+KL RTLT
Sbjct: 236 IKAQNLNESQKDAILSCLHMKKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRTLT 295
Query: 180 CAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYRVK 239
CAPTNTAV+ V +RL S+ S E+ +YGLGDI+LFGN RMK++SY+GL +VFLD RV
Sbjct: 296 CAPTNTAVLAVVSRLHSIAKDSLEHGSYGLGDILLFGNSKRMKIESYKGLGEVFLDNRVD 355
Query: 240 SLLKC---LTGWKHDFESMILLLQEPRKQYLLL--HGNEKGLVSLEESAV 284
LL C +TGWK+ ESMI LL++P +QY L + + ++SLEE AV
Sbjct: 356 DLLYCFSPMTGWKNCLESMISLLKDPEEQYALYLNSKHNENVMSLEEFAV 405
>Medtr5g076300.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr5:32517067-32511573 |
20130731
Length = 897
Score = 292 bits (748), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 173/354 (48%), Positives = 230/354 (64%), Gaps = 26/354 (7%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCIEVS-DLRSNH-NKLYAI 59
TN+RP+SV DL+R Y +I Y+ GSK D++++L SK + + DLRSN KLY +
Sbjct: 126 FTNVRPRSVSDLSRIERYCHIGYICGSKDELNDQITMLLSKEMHNNIDLRSNKAQKLYVV 185
Query: 60 YLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGEN-PQASLIIP 118
YL+N+TTN RIW ALNS + NMNIIK+VLQP S R +NC C SGE PQ+ +
Sbjct: 186 YLINMTTNIRIWNALNSDMEESNMNIIKKVLQPYS--RMEQNCHTCWSGEYLPQSYSRVK 243
Query: 119 GIIRSQNLNESQEDAVSSCVNMINCNHNN-TKLIWGPPGTGKTKTVACLLFSLVKLEART 177
+I++QNLN+SQED++ SC ++ C+HN+ KLIWGPPGTGKTKTVA +LF L+KL RT
Sbjct: 244 NMIKAQNLNKSQEDSILSCFHIKKCHHNDPIKLIWGPPGTGKTKTVASMLFCLLKLRIRT 303
Query: 178 LTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYR 237
LTCAPTNTAV+ V +RL S+ S E+ +YGLGDIVLFGN RMK+DSY+ L +VFL+ R
Sbjct: 304 LTCAPTNTAVLAVVSRLHSIAKDSLEHGSYGLGDIVLFGNSKRMKIDSYKDLGEVFLENR 363
Query: 238 VKSLLKC---LTGWKHDFESMILLLQEPRKQYLLLHG--NEKGLVSLEESA--------- 283
V LL +TGW + ESMI LL++P +QY L NE ++SLEE A
Sbjct: 364 VDDLLHAFSPMTGWINSLESMIKLLKDPEEQYDLYKNDVNEGVVMSLEEFANGNYNHVKN 423
Query: 284 ----VEKDKGNDLLSTPLMGYVWKKLKEFTWQYQLESPKEKICI-ITIEQFVKQ 332
K +D T L +V KK QY + +K+ I +++EQF++Q
Sbjct: 424 AYFSYTKHCEHDCPMT-LEEFVKKKYDYIIEQYDMYKDDKKLSIGMSMEQFLRQ 476
>Medtr5g076320.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | LC | chr5:32534161-32530565 |
20130731
Length = 884
Score = 279 bits (713), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 158/293 (53%), Positives = 197/293 (67%), Gaps = 35/293 (11%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGS---KHPFTDKVSVLSSKCIEVS---DLRSNHN- 54
T+IRP+S++DLN S Y I YV+ + + D++SVLS KC+++ DL++N
Sbjct: 150 FTHIRPKSLNDLNTLQSPYRIAYVKKAIKAGNGIPDRISVLSCKCMKMDIKDDLQNNKER 209
Query: 55 -------------------KLYAIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSN 95
KLYA+YLMN+TTN RI KAL S +MNIIK +L P
Sbjct: 210 SSKCMNMDIEDDLWNNRELKLYAVYLMNMTTNVRICKALKSI---SHMNIIKTMLGPRP- 265
Query: 96 VRGGENCQICLSGENPQASLIIPG-IIRSQNLNESQEDAVSSCVNMINCNHNNTKLIWGP 154
GENCQ+C + Q+SLI IIRSQNLNESQEDAVSSCV+M+NCNH + KLIWGP
Sbjct: 266 -ISGENCQLCPPEPDSQSSLIQEDVIIRSQNLNESQEDAVSSCVSMMNCNHADIKLIWGP 324
Query: 155 PGTGKTKTVACLLFSLVKLEARTLTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVL 214
PGTGKTKTVACLLFSL+KL+ RTLTCAPTNTA++QVA+RL LV S E++TY LGDIVL
Sbjct: 325 PGTGKTKTVACLLFSLLKLQTRTLTCAPTNTAILQVASRLNRLVMDSLEHDTYSLGDIVL 384
Query: 215 FGNKTRMKVDSYEGLEDVFLDYRVKSLLKCL---TGWKHDFESMILLLQEPRK 264
FGN RM S++GL FLDY V++L++C TGWK + SMI LL+ K
Sbjct: 385 FGNGKRMNFSSHQGLVKFFLDYHVENLMECFDPNTGWKTNLLSMIQLLKSMEK 437
>Medtr3g064210.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:28870689-28861592 |
20130731
Length = 1113
Score = 252 bits (644), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 136/277 (49%), Positives = 180/277 (64%), Gaps = 14/277 (5%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYV-RGSKHPFTDKV---SVLSSKCIEVSDLRSNHNKL- 56
+T+ RP +DDLN PG+ Y+I + R K +T+ V +L+SK IE+ R +
Sbjct: 123 LTDRRPTCIDDLNTPGNSYSIASIKRVRKKEYTEDVYEAKILASKPIELEQYRQKDDTYT 182
Query: 57 --YAIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQAS 114
+ +YL N+TT RIW LNS G +++IIK++LQPDS V GENC C S E
Sbjct: 183 YGFGVYLCNMTTFIRIWNVLNSDPDGPSIHIIKQLLQPDSGV--GENCAQCFSSERHSID 240
Query: 115 LIIPG-IIRSQNLNESQEDAVSSCVNMINCNHNNT-KLIWGPPGTGKTKTVACLLFSLVK 172
G +IRS +LN++QE+ V SC+ C+H NT KLIWGPPGTGKTKT + LLF+L+K
Sbjct: 241 TSRLGAVIRSFDLNDAQEEGVLSCIAARECSHKNTVKLIWGPPGTGKTKTASSLLFALLK 300
Query: 173 LEARTLTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDV 232
RTLTCAPTN AV+++ +R + LV S +Y TYGLGDIVLFGN+ RMK+D+ + L +
Sbjct: 301 RRCRTLTCAPTNVAVLELTSRFIRLVMKSLDYLTYGLGDIVLFGNRKRMKIDNDDDLFVI 360
Query: 233 FLDYRVKSLLKC---LTGWKHDFESMILLLQEPRKQY 266
FLDYR L KC L+GWKH E + LL+ P KQY
Sbjct: 361 FLDYRANILSKCFAPLSGWKHHLELVTYLLENPEKQY 397
>Medtr0189s0030.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | scaffold0189:14094-24465 |
20130731
Length = 2395
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 110/298 (36%), Positives = 169/298 (56%), Gaps = 42/298 (14%)
Query: 1 MITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDK--------------VSVLSSKCIEV 46
++ + +P++V+DL R G ++ G F D+ V++S+ I++
Sbjct: 89 ILADFKPETVNDLQRSGRTWSFVLSAG----FLDEEIQGEDDDTKLMPTFKVIASEDIDI 144
Query: 47 SDLRSNHNKLYAIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICL 106
++ L+ I+L N+T N RIW L+ GG +IK++L P V E+C C
Sbjct: 145 DEM--GQKSLFIIFLTNITPNRRIWNVLH---MGGESKLIKKILCPSVVVE--ESCDYC- 196
Query: 107 SGENPQASLIIPGIIR---SQNLNESQEDAVSSCVNMINCNHNNT-KLIWGPPGTGKTKT 162
+P+ + + S LNESQ A+ +C++ +CNH +T LIWGPPGTGKTKT
Sbjct: 197 ---SPRTDALRDDEMYQRLSSELNESQNKAICACLSSFHCNHKSTVDLIWGPPGTGKTKT 253
Query: 163 VACLLFSLVKLEARTLTCAPTNTAVIQVATRLLSLVTSSNEYETYG----LGDIVLFGNK 218
+ LLF+L+K+ RTL CAPTN A+ +VA+R+LS+V S + + LGD++LFGN
Sbjct: 254 LGTLLFALLKMNCRTLVCAPTNIAIKEVASRVLSMVRESFDRNSDALFCNLGDMLLFGNH 313
Query: 219 TRMKVDSYEGLEDVFLDYRVKSLLKCLT---GWKHDFESMILLLQEPRKQYLLLHGNE 273
++KV + +E+++LDYRVK LL C + GWK+ F SMI LL+ Y + NE
Sbjct: 314 EQLKVGA--EIEEIYLDYRVKQLLLCFSPYNGWKYYFVSMIALLENCVSLYQIFIENE 369
>Medtr3g436400.1 | P-loop nucleoside triphosphate hydrolase
superfamily protein | HC | chr3:12235889-12229184 |
20130731
Length = 1644
Score = 163 bits (412), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/284 (35%), Positives = 163/284 (57%), Gaps = 24/284 (8%)
Query: 1 MITNIRPQSVDDLNRPGSYYN-ITYVRGSKHPFTDKVS-----VLSSKCIEVSDLRSNHN 54
++ + +P+S++D R G ++ +T VR +DK+ V +SK +++ +LR +
Sbjct: 136 VLADFKPESMNDFQRFGRMWSFLTVVRTEDENESDKMDAVCLKVKASKDLDLDELR--YK 193
Query: 55 KLYAIYLMNLTTNFRIWKALNSQQKGGNMNIIKRVL-QPDSNVRGGENCQICLSGENPQA 113
L+ ++L N+ + + W L+ GN+ +++++L D V+G +C
Sbjct: 194 PLFIVFLTNVGSYRKAWSGLH--MTDGNLKLVRQILCNGDDEVKGSCDCTSLYDAMWDDC 251
Query: 114 SLIIPGIIRSQNLNESQEDAVSSCVNMINCNHNNT-KLIWGPPGTGKTKTVACLLFSLVK 172
S S +LNE+Q A+S+C++ I+C+HN T KL+WGPPGTGKTKT+ +LF L+K
Sbjct: 252 SYRR----LSSDLNEAQNTAISNCLSGIHCSHNATVKLVWGPPGTGKTKTLGTMLFILMK 307
Query: 173 LEARTLTCAPTNTAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDV 232
++ R L CAPTN A+ +VA+R+L + S GD++LFGN R+ V S E +ED+
Sbjct: 308 MKYRILVCAPTNVAIKEVASRVLHIARESQ----CSAGDMLLFGNNDRLDVGS-EEIEDI 362
Query: 233 FLDYRVKSLLKCL---TGWKHDFESMILLLQEPRKQYLLLHGNE 273
FLD RV+ L KCL TGW++ SMI + Y + NE
Sbjct: 363 FLDNRVRKLRKCLSSFTGWRNCLISMIHFFKSCASDYKMFIENE 406
>Medtr3g078040.1 | hypothetical protein | LC |
chr3:35164793-35162955 | 20130731
Length = 275
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 61/126 (48%), Positives = 87/126 (69%), Gaps = 4/126 (3%)
Query: 2 ITNIRPQSVDDLNRPGSYYNITYVRGSKHPFTDKVSVLSSKCI-EVSDLRSNHNKLYAIY 60
T++RP+ VDDLN YNI V K+ + ++ +LSS+CI E R N K+YAI+
Sbjct: 139 FTDVRPKRVDDLNTQRCPYNIALVIVPKYD-SGEILILSSRCITEFDSRRDNTKKMYAIH 197
Query: 61 LMNLTTNFRIWKALNSQQKGGNMNIIKRVLQPDSNVRGGENCQICLSGENPQASLIIPGI 120
L+N+TT+ RIWKALNSQ G ++NII +VL+P ++ GENC+IC+SG N Q+SLI +
Sbjct: 198 LINMTTDVRIWKALNSQTYGEHLNIIIKVLRP--SLISGENCKICMSGSNVQSSLIKEDV 255
Query: 121 IRSQNL 126
IRS+ +
Sbjct: 256 IRSKKI 261
>Medtr7g092200.1 | DNA-binding protein SMUBP-2 | HC |
chr7:36518499-36511162 | 20130731
Length = 645
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 5/72 (6%)
Query: 124 QNLNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKLEARTLTCAPT 183
+NL+ SQ+DA+S ++ N L+ GPPGTGKT TV ++ VK ++ L CA +
Sbjct: 193 KNLDYSQKDAISKALS-----SKNVFLLHGPPGTGKTTTVVEIILQEVKRGSKILACAAS 247
Query: 184 NTAVIQVATRLL 195
N AV + RL+
Sbjct: 248 NIAVDNIVERLV 259
>Medtr5g013820.1 | regulator of nonsense transcripts protein | HC |
chr5:4548278-4534982 | 20130731
Length = 1253
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 59/117 (50%), Gaps = 20/117 (17%)
Query: 126 LNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKL-EARTLTCAPTN 184
LN SQ AV S + LI GPPGTGKT T A L++ + K + + L CAP+N
Sbjct: 477 LNASQVYAVKSVL------QRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSN 530
Query: 185 TAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYRVKSL 241
AV Q+A ++ + GL +V K+R V S +E + L Y+V+ L
Sbjct: 531 VAVDQLAEKISAT----------GL-KVVRLCAKSREAVSS--PVEHLTLHYQVRHL 574
>Medtr5g013820.2 | regulator of nonsense transcripts protein | HC |
chr5:4548258-4534982 | 20130731
Length = 1275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 58/117 (49%), Gaps = 20/117 (17%)
Query: 126 LNESQEDAVSSCVNMINCNHNNTKLIWGPPGTGKTKTVACLLFSLVKL-EARTLTCAPTN 184
LN SQ AV S + LI GPPGTGKT T A L++ + K + + L CAP+N
Sbjct: 477 LNASQVYAVKSVL------QRPISLIQGPPGTGKTVTSAALVYHMAKQGQGQVLVCAPSN 530
Query: 185 TAVIQVATRLLSLVTSSNEYETYGLGDIVLFGNKTRMKVDSYEGLEDVFLDYRVKSL 241
AV Q+A ++ GL +V K+R V S +E + L Y+V+ L
Sbjct: 531 VAVDQLAEKI----------SATGL-KVVRLCAKSREAVSS--PVEHLTLHYQVRHL 574