Miyakogusa Predicted Gene

Lj0g3v0158719.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0158719.1 Non Characterized Hit- tr|I1KNY4|I1KNY4_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.35674 PE,45.52,3e-19,
,CUFF.9814.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088030.1 | hypothetical protein | HC | chr3:39908391-3990...   192   1e-49
Medtr1g030060.1 | hypothetical protein | HC | chr1:10474963-1047...   166   1e-41
Medtr8g094790.1 | hypothetical protein | HC | chr8:39595746-3959...    71   6e-13

>Medtr3g088030.1 | hypothetical protein | HC |
           chr3:39908391-39906229 | 20130731
          Length = 176

 Score =  192 bits (488), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 102/146 (69%), Positives = 111/146 (76%), Gaps = 5/146 (3%)

Query: 23  QRDVHYSCGTCGYELXXXXXXXXXXXXXXTKYGKSIKRGIIPFFNIDDSRFTQVDEIECA 82
           QRDV YSCG+CGY+L              +KYGKSIKRGII FFNIDDSRFTQVDEIECA
Sbjct: 33  QRDVRYSCGSCGYDLNLSSSNRNTSSID-SKYGKSIKRGIISFFNIDDSRFTQVDEIECA 91

Query: 83  PHFSKHSWGLFRRKTKLLCRKCCNYIGNAYDGYTSS--SFPLVVSNGTESSPAATESPNQ 140
           PHFSK+ WGLFRRKTKLLCRKCCN+IG AY+G  SS  SF LV SNG E SP +TE+P  
Sbjct: 92  PHFSKNLWGLFRRKTKLLCRKCCNHIGYAYNGNNSSSPSFILVSSNGAEPSP-STEAPTH 150

Query: 141 AKYNIRIRALQPSSSSQ-EYGISVFA 165
            KYNIRIRALQPSSS +   GISV A
Sbjct: 151 VKYNIRIRALQPSSSQECGNGISVLA 176


>Medtr1g030060.1 | hypothetical protein | HC |
           chr1:10474963-10476367 | 20130731
          Length = 138

 Score =  166 bits (419), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 89/137 (64%), Positives = 101/137 (73%), Gaps = 5/137 (3%)

Query: 29  SCGTCGYELXXXXXXXXXXXXXXTKYGKSIKRGIIPFFNIDDSRFTQVDEIECAPHFSKH 88
           SCG CGYEL              +KYGKSIKRGII FFNIDDSRFTQVDEI+CAPHF KH
Sbjct: 7   SCGACGYELNLSSSNRNTTSIG-SKYGKSIKRGIISFFNIDDSRFTQVDEIQCAPHFHKH 65

Query: 89  SWGLFRRKTKLLCRKCCNYIGNAYDGYTSSSFPLVVSNGTESSPAATESPNQAKYNIRIR 148
           SWGLFRR+TKLLCRKC N+IGNAY+G+T SSFPLV     E S  +++  +  KY+IRIR
Sbjct: 66  SWGLFRRRTKLLCRKCGNHIGNAYNGFT-SSFPLVTDG--EESSPSSKVSSGVKYDIRIR 122

Query: 149 ALQPSSSSQEYGISVFA 165
           +LQP SSS E GI V A
Sbjct: 123 SLQP-SSSDESGIPVLA 138


>Medtr8g094790.1 | hypothetical protein | HC |
           chr8:39595746-39596546 | 20130731
          Length = 150

 Score = 70.9 bits (172), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 53/148 (35%), Positives = 79/148 (53%), Gaps = 24/148 (16%)

Query: 17  SSSSHTQRDVHYSCGTCGYELXXXXXXXXXXXXXX-TKYGKSI---KRGIIPFFNIDDSR 72
           S+S+   RDV+YSCG+CGYEL               + YGKSI   KR +I FF++D++R
Sbjct: 17  SNSNSFIRDVNYSCGSCGYELNLNSSNRNTTLSLTDSNYGKSIKKRKRCLISFFSVDETR 76

Query: 73  FTQVDEIECAPHFSKHSWGL----FRR--KTKLLCRKCCNYIGNAYDGYTSSSFPLVVSN 126
           FTQ+ +   +      SW +    F+R   TKLLCR C N++G A       +FP    +
Sbjct: 77  FTQIQQFSFS-----FSWRISFFNFQRTTTTKLLCRNCRNHLGYA------RTFPSQSHS 125

Query: 127 GTESSPAATESPNQAKYNIRIRALQPSS 154
            + S    ++S     + I++ A+QPSS
Sbjct: 126 HSHSWDGISDS---RIFYIKLNAIQPSS 150