Miyakogusa Predicted Gene

Lj0g3v0154389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0154389.1 tr|B9P4Y2|B9P4Y2_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_790273 PE=4
SV=1,36.36,1e-18,seg,NULL,CUFF.9586.1
         (374 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g022990.1 | hypothetical protein | HC | chr2:8018100-80131...   549   e-156
Medtr4g048040.1 | hypothetical protein | HC | chr4:16971401-1696...   376   e-104
Medtr4g048040.2 | hypothetical protein | HC | chr4:16971447-1696...   376   e-104
Medtr4g048040.3 | hypothetical protein | HC | chr4:16971447-1696...   375   e-104
Medtr0221s0020.2 | transmembrane protein, putative | HC | scaffo...   210   2e-54
Medtr0221s0020.3 | transmembrane protein, putative | HC | scaffo...   210   2e-54
Medtr0221s0020.1 | transmembrane protein, putative | HC | scaffo...   209   3e-54
Medtr0221s0020.4 | transmembrane protein, putative | HC | scaffo...   209   3e-54

>Medtr2g022990.1 | hypothetical protein | HC | chr2:8018100-8013186
           | 20130731
          Length = 442

 Score =  549 bits (1415), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 267/346 (77%), Positives = 298/346 (86%), Gaps = 3/346 (0%)

Query: 31  ARESHNSRFGHLQGPVLPDNHGGSMFPKLSPLGXXX---XXXXXXXXXXXXXXTNTSIPK 87
           ARESH+SR  H +GPV  DNH GSMFPK++PLG                    TN SIPK
Sbjct: 11  ARESHSSRVEHAEGPVQLDNHVGSMFPKIAPLGAPQGPQPFLPLLAPSPMTPFTNISIPK 70

Query: 88  LSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKFTDALAL 147
           LSGLC+LNFT A+SLLSVTA+DCW  FAPF+AN++CCPQLEAT+T+LIGQSSK T+ALAL
Sbjct: 71  LSGLCSLNFTNAKSLLSVTAIDCWGFFAPFVANIMCCPQLEATVTVLIGQSSKHTNALAL 130

Query: 148 NSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVDTSKLLT 207
           N TVAKHCLSDVEQILMGQG +GDL+ +CS+   NLTEA+CPVK+VN+FND+VDTSKLL 
Sbjct: 131 NGTVAKHCLSDVEQILMGQGASGDLRQICSISSSNLTEASCPVKHVNEFNDMVDTSKLLL 190

Query: 208 ACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPEHSIRVNDCRNIVLRW 267
           AC  IDPVKECCYQ+C NAILEAATAIASKGS +L++DASH LPEHSIRVNDCRNIVLRW
Sbjct: 191 ACADIDPVKECCYQVCHNAILEAATAIASKGSHVLDLDASHDLPEHSIRVNDCRNIVLRW 250

Query: 268 VASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNAMESYVSH 327
           +ASKLDPSH KKVLRGLSNCN+NKVCPLVLPD KQVAK CG GISN+TACCNAMESYVSH
Sbjct: 251 IASKLDPSHGKKVLRGLSNCNMNKVCPLVLPDAKQVAKSCGSGISNRTACCNAMESYVSH 310

Query: 328 LQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
           LQKQSFITNLQALDCAETLAMKLKKSN+ +DVYSLCH+SLKDFSLQ
Sbjct: 311 LQKQSFITNLQALDCAETLAMKLKKSNVADDVYSLCHISLKDFSLQ 356


>Medtr4g048040.1 | hypothetical protein | HC |
           chr4:16971401-16965186 | 20130731
          Length = 477

 Score =  376 bits (966), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/293 (60%), Positives = 228/293 (77%), Gaps = 2/293 (0%)

Query: 81  TNTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSK 140
           TN S+PKLSGLC+LNF+ A+ +++ TA DCW  FAP+LANV+CCPQ +A L  LIGQSSK
Sbjct: 74  TNNSVPKLSGLCSLNFSAAQHIMTQTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSK 133

Query: 141 FTDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIV 200
           ++  LALN+T AKHCLSDV ++L+ QG T DL ++CS+H  NLTE +CPV  V++F  IV
Sbjct: 134 YSGVLALNTTHAKHCLSDVHKVLVSQGATEDLNNICSIHSSNLTEGSCPVAFVDEFESIV 193

Query: 201 DTSKLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPEHSIRVNDC 260
           DTS+LLTAC KIDPV ECC Q+CQNAI  AA  I+   +D+   + +H LP  +  VNDC
Sbjct: 194 DTSRLLTACRKIDPVNECCDQVCQNAINYAARKISL--NDMSNSNGNHSLPRKTALVNDC 251

Query: 261 RNIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNA 320
           +NIVLRW+A KL+ S A  V RGLSNCN+NKVCPLV P+  ++AK CG+ I N+T+CC A
Sbjct: 252 KNIVLRWLAGKLNSSAANSVFRGLSNCNLNKVCPLVFPNISRIAKECGNQIRNQTSCCKA 311

Query: 321 MESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
            ++YVS+LQ QSF+TNLQAL CA +L  KL+K+N+T+++Y LCH+SLKDFSLQ
Sbjct: 312 TKNYVSYLQGQSFVTNLQALKCAVSLGEKLQKANVTKNIYDLCHISLKDFSLQ 364


>Medtr4g048040.2 | hypothetical protein | HC |
           chr4:16971447-16966635 | 20130731
          Length = 454

 Score =  376 bits (965), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/293 (60%), Positives = 228/293 (77%), Gaps = 2/293 (0%)

Query: 81  TNTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSK 140
           TN S+PKLSGLC+LNF+ A+ +++ TA DCW  FAP+LANV+CCPQ +A L  LIGQSSK
Sbjct: 74  TNNSVPKLSGLCSLNFSAAQHIMTQTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSK 133

Query: 141 FTDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIV 200
           ++  LALN+T AKHCLSDV ++L+ QG T DL ++CS+H  NLTE +CPV  V++F  IV
Sbjct: 134 YSGVLALNTTHAKHCLSDVHKVLVSQGATEDLNNICSIHSSNLTEGSCPVAFVDEFESIV 193

Query: 201 DTSKLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPEHSIRVNDC 260
           DTS+LLTAC KIDPV ECC Q+CQNAI  AA  I+   +D+   + +H LP  +  VNDC
Sbjct: 194 DTSRLLTACRKIDPVNECCDQVCQNAINYAARKISL--NDMSNSNGNHSLPRKTALVNDC 251

Query: 261 RNIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNA 320
           +NIVLRW+A KL+ S A  V RGLSNCN+NKVCPLV P+  ++AK CG+ I N+T+CC A
Sbjct: 252 KNIVLRWLAGKLNSSAANSVFRGLSNCNLNKVCPLVFPNISRIAKECGNQIRNQTSCCKA 311

Query: 321 MESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
            ++YVS+LQ QSF+TNLQAL CA +L  KL+K+N+T+++Y LCH+SLKDFSLQ
Sbjct: 312 TKNYVSYLQGQSFVTNLQALKCAVSLGEKLQKANVTKNIYDLCHISLKDFSLQ 364


>Medtr4g048040.3 | hypothetical protein | HC |
           chr4:16971447-16966561 | 20130731
          Length = 462

 Score =  375 bits (964), Expect = e-104,   Method: Compositional matrix adjust.
 Identities = 176/293 (60%), Positives = 228/293 (77%), Gaps = 2/293 (0%)

Query: 81  TNTSIPKLSGLCTLNFTTAESLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSK 140
           TN S+PKLSGLC+LNF+ A+ +++ TA DCW  FAP+LANV+CCPQ +A L  LIGQSSK
Sbjct: 74  TNNSVPKLSGLCSLNFSAAQHIMTQTATDCWTSFAPYLANVVCCPQFDAMLVTLIGQSSK 133

Query: 141 FTDALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIV 200
           ++  LALN+T AKHCLSDV ++L+ QG T DL ++CS+H  NLTE +CPV  V++F  IV
Sbjct: 134 YSGVLALNTTHAKHCLSDVHKVLVSQGATEDLNNICSIHSSNLTEGSCPVAFVDEFESIV 193

Query: 201 DTSKLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPEHSIRVNDC 260
           DTS+LLTAC KIDPV ECC Q+CQNAI  AA  I+   +D+   + +H LP  +  VNDC
Sbjct: 194 DTSRLLTACRKIDPVNECCDQVCQNAINYAARKISL--NDMSNSNGNHSLPRKTALVNDC 251

Query: 261 RNIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNA 320
           +NIVLRW+A KL+ S A  V RGLSNCN+NKVCPLV P+  ++AK CG+ I N+T+CC A
Sbjct: 252 KNIVLRWLAGKLNSSAANSVFRGLSNCNLNKVCPLVFPNISRIAKECGNQIRNQTSCCKA 311

Query: 321 MESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
            ++YVS+LQ QSF+TNLQAL CA +L  KL+K+N+T+++Y LCH+SLKDFSLQ
Sbjct: 312 TKNYVSYLQGQSFVTNLQALKCAVSLGEKLQKANVTKNIYDLCHISLKDFSLQ 364


>Medtr0221s0020.2 | transmembrane protein, putative | HC |
           scaffold0221:2098-8119 | 20130731
          Length = 479

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 86  PKLSGLCTLNFTTAE--SLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKFTD 143
           P L+G C +NF+  E   +L  TA DC    A  + NVICCPQ  + + I+ G   + ++
Sbjct: 96  PVLTGKCPVNFSLPEISEILDRTAFDCAVPLASLVGNVICCPQFSSLIHIVQGLFGRKSN 155

Query: 144 ALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVDTS 203
            L L +TVA HC SDV  IL  +G    L  +CS+   N T  +CPVK+   F   V+TS
Sbjct: 156 NLVLPNTVADHCFSDVISILASRGANSSLSTLCSIKSSNFTGRSCPVKDHATFERTVNTS 215

Query: 204 KLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPE--HSIRVNDCR 261
           KL+ AC  +DP+KECC  +CQ AI++A   I+  G  ++  +  H+  E  H+  +NDC+
Sbjct: 216 KLVEACRTVDPLKECCRPVCQPAIMDATLQIS--GRQMMINNDDHMAGEMNHTDYLNDCK 273

Query: 262 NIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNAM 321
            +V  +++ +L    A K  R LS C VNKVCPL   +   V   C +  +   +CC+++
Sbjct: 274 GVVYSYLSKQLSIEAANKAFRILSACKVNKVCPLTFTEPSDVIAVCQNVAAPSPSCCSSL 333

Query: 322 ESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQG 374
            +Y++ +QKQ  +TN QA+ CA      L+   +  +V+ LC V LKDFS+Q 
Sbjct: 334 NTYIAGIQKQMLVTNKQAIICATQFGSMLRGGGVMTNVFELCDVDLKDFSIQA 386


>Medtr0221s0020.3 | transmembrane protein, putative | HC |
           scaffold0221:2098-8119 | 20130731
          Length = 479

 Score =  210 bits (534), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 111/293 (37%), Positives = 166/293 (56%), Gaps = 6/293 (2%)

Query: 86  PKLSGLCTLNFTTAE--SLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKFTD 143
           P L+G C +NF+  E   +L  TA DC    A  + NVICCPQ  + + I+ G   + ++
Sbjct: 96  PVLTGKCPVNFSLPEISEILDRTAFDCAVPLASLVGNVICCPQFSSLIHIVQGLFGRKSN 155

Query: 144 ALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVDTS 203
            L L +TVA HC SDV  IL  +G    L  +CS+   N T  +CPVK+   F   V+TS
Sbjct: 156 NLVLPNTVADHCFSDVISILASRGANSSLSTLCSIKSSNFTGRSCPVKDHATFERTVNTS 215

Query: 204 KLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPE--HSIRVNDCR 261
           KL+ AC  +DP+KECC  +CQ AI++A   I+  G  ++  +  H+  E  H+  +NDC+
Sbjct: 216 KLVEACRTVDPLKECCRPVCQPAIMDATLQIS--GRQMMINNDDHMAGEMNHTDYLNDCK 273

Query: 262 NIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNAM 321
            +V  +++ +L    A K  R LS C VNKVCPL   +   V   C +  +   +CC+++
Sbjct: 274 GVVYSYLSKQLSIEAANKAFRILSACKVNKVCPLTFTEPSDVIAVCQNVAAPSPSCCSSL 333

Query: 322 ESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQG 374
            +Y++ +QKQ  +TN QA+ CA      L+   +  +V+ LC V LKDFS+Q 
Sbjct: 334 NTYIAGIQKQMLVTNKQAIICATQFGSMLRGGGVMTNVFELCDVDLKDFSIQA 386


>Medtr0221s0020.1 | transmembrane protein, putative | HC |
           scaffold0221:2098-8119 | 20130731
          Length = 475

 Score =  209 bits (533), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 6/292 (2%)

Query: 86  PKLSGLCTLNFTTAE--SLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKFTD 143
           P L+G C +NF+  E   +L  TA DC    A  + NVICCPQ  + + I+ G   + ++
Sbjct: 96  PVLTGKCPVNFSLPEISEILDRTAFDCAVPLASLVGNVICCPQFSSLIHIVQGLFGRKSN 155

Query: 144 ALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVDTS 203
            L L +TVA HC SDV  IL  +G    L  +CS+   N T  +CPVK+   F   V+TS
Sbjct: 156 NLVLPNTVADHCFSDVISILASRGANSSLSTLCSIKSSNFTGRSCPVKDHATFERTVNTS 215

Query: 204 KLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPE--HSIRVNDCR 261
           KL+ AC  +DP+KECC  +CQ AI++A   I+  G  ++  +  H+  E  H+  +NDC+
Sbjct: 216 KLVEACRTVDPLKECCRPVCQPAIMDATLQIS--GRQMMINNDDHMAGEMNHTDYLNDCK 273

Query: 262 NIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNAM 321
            +V  +++ +L    A K  R LS C VNKVCPL   +   V   C +  +   +CC+++
Sbjct: 274 GVVYSYLSKQLSIEAANKAFRILSACKVNKVCPLTFTEPSDVIAVCQNVAAPSPSCCSSL 333

Query: 322 ESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
            +Y++ +QKQ  +TN QA+ CA      L+   +  +V+ LC V LKDFS+Q
Sbjct: 334 NTYIAGIQKQMLVTNKQAIICATQFGSMLRGGGVMTNVFELCDVDLKDFSIQ 385


>Medtr0221s0020.4 | transmembrane protein, putative | HC |
           scaffold0221:2098-8119 | 20130731
          Length = 475

 Score =  209 bits (533), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 111/292 (38%), Positives = 166/292 (56%), Gaps = 6/292 (2%)

Query: 86  PKLSGLCTLNFTTAE--SLLSVTAVDCWEGFAPFLANVICCPQLEATLTILIGQSSKFTD 143
           P L+G C +NF+  E   +L  TA DC    A  + NVICCPQ  + + I+ G   + ++
Sbjct: 96  PVLTGKCPVNFSLPEISEILDRTAFDCAVPLASLVGNVICCPQFSSLIHIVQGLFGRKSN 155

Query: 144 ALALNSTVAKHCLSDVEQILMGQGGTGDLKHVCSVHPLNLTEAACPVKNVNDFNDIVDTS 203
            L L +TVA HC SDV  IL  +G    L  +CS+   N T  +CPVK+   F   V+TS
Sbjct: 156 NLVLPNTVADHCFSDVISILASRGANSSLSTLCSIKSSNFTGRSCPVKDHATFERTVNTS 215

Query: 204 KLLTACEKIDPVKECCYQICQNAILEAATAIASKGSDILEMDASHVLPE--HSIRVNDCR 261
           KL+ AC  +DP+KECC  +CQ AI++A   I+  G  ++  +  H+  E  H+  +NDC+
Sbjct: 216 KLVEACRTVDPLKECCRPVCQPAIMDATLQIS--GRQMMINNDDHMAGEMNHTDYLNDCK 273

Query: 262 NIVLRWVASKLDPSHAKKVLRGLSNCNVNKVCPLVLPDTKQVAKGCGHGISNKTACCNAM 321
            +V  +++ +L    A K  R LS C VNKVCPL   +   V   C +  +   +CC+++
Sbjct: 274 GVVYSYLSKQLSIEAANKAFRILSACKVNKVCPLTFTEPSDVIAVCQNVAAPSPSCCSSL 333

Query: 322 ESYVSHLQKQSFITNLQALDCAETLAMKLKKSNITEDVYSLCHVSLKDFSLQ 373
            +Y++ +QKQ  +TN QA+ CA      L+   +  +V+ LC V LKDFS+Q
Sbjct: 334 NTYIAGIQKQMLVTNKQAIICATQFGSMLRGGGVMTNVFELCDVDLKDFSIQ 385