Miyakogusa Predicted Gene
- Lj0g3v0139329.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0139329.1 Non Chatacterized Hit- tr|I1MVT1|I1MVT1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7205
PE=,76.49,0,seg,NULL; CYCLIN-D,NULL; CYCLINE,NULL; domain present in
cyclins, TFIIB and Retinob,Cyclin-like; no ,CUFF.8475.1
(359 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 | chr5:26836313-268... 324 7e-89
AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 | chr3:18565322-185... 303 1e-82
AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 | chr4:16357... 292 3e-79
AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 | chr2:9... 154 1e-37
AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555... 149 2e-36
AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 | chr1:2... 147 1e-35
AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 133 2e-31
AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26142110-261... 129 4e-30
AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282... 127 8e-30
AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 | chr5:26141592-261... 127 2e-29
AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433... 96 5e-20
AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 94 1e-19
AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 | chr4:17679497-176... 94 2e-19
AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 | chr5:41708... 78 9e-15
AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 | ... 55 6e-08
AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137... 55 9e-08
AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 | chr1:16775035-167... 51 1e-06
AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 | chr3:362547... 50 3e-06
>AT5G67260.1 | Symbols: CYCD3;2 | CYCLIN D3;2 |
chr5:26836313-26837665 FORWARD LENGTH=367
Length = 367
Score = 324 bits (830), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 240/363 (66%), Gaps = 33/363 (9%)
Query: 17 LDALLCEEQHTFDDDDEEKATHATECHTINDD-------PLI-LFWEEDDELVSLISKER 68
LD L CEE+ F +DD + ++ PL+ +F +DDE++SLISKE
Sbjct: 18 LDGLYCEEETGFVEDDLDDDGDLDFLEKSDESVVKFQFLPLLDMFLWDDDEILSLISKEN 77
Query: 69 GETHLGSLDLHDG---GTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDK 125
+ DG R E + W+ +V +H+GF++LT +LAV+YFDRF+TS + Q DK
Sbjct: 78 ETNPCFGEQILDGFLVSCRKEALDWVLRVKSHYGFTSLTAILAVNYFDRFMTSIKLQTDK 137
Query: 126 PWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHP 185
PWM+QL AVA LSLAAKVEE VPLLLDLQVEE+R++FEAKTIQRMELL+LSTL+WRMHP
Sbjct: 138 PWMSQLVAVASLSLAAKVEEIQVPLLLDLQVEEARYLFEAKTIQRMELLILSTLQWRMHP 197
Query: 186 VTPISFFEHIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAMIHVIKE 245
VTPISFF+HIIRR G K +F +CER+L++VI D+R M Y PS LA A MI V +E
Sbjct: 198 VTPISFFDHIIRRFGSKWHQQLDFCRKCERLLISVIADTRFMRYFPSVLATAIMILVFEE 257
Query: 246 IEPFNATEYIDQLMGLLKISEEQVNQCYKLILKLLVCYEGISNLHPKRKRS----EPSSP 301
++P + EY Q+ LLK+++E+VN+CY+L+L+ +P +KR + SP
Sbjct: 258 LKPCDEVEYQSQITTLLKVNQEKVNECYELLLE----------HNPSKKRMMNLVDQDSP 307
Query: 302 GGVIDASFSCDSSNDSWATTSAVSTSL-----EPLFKRSRAQDQQMRLPSVNRVSIDVLN 356
GV+D DSSN SW ++ S S EPL KR R Q+QQMRLPS+NR+ +DVL+
Sbjct: 308 SGVLDFD---DSSNSSWNVSTTASVSSSSSSPEPLLKRRRVQEQQMRLPSINRMFLDVLS 364
Query: 357 SPR 359
SPR
Sbjct: 365 SPR 367
>AT3G50070.1 | Symbols: CYCD3;3 | CYCLIN D3;3 |
chr3:18565322-18566669 REVERSE LENGTH=361
Length = 361
Score = 303 bits (776), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 186/378 (49%), Positives = 239/378 (63%), Gaps = 36/378 (9%)
Query: 1 MALREXXXXXXXSPSFLDALLCEEQHTFD------DDDEEKATHATECHTINDDPLILFW 54
MAL E LD L CEE+ F D+ EK + +D + W
Sbjct: 1 MALEEEEESQNAPFCVLDGLFCEEESEFHEQVDLCDESVEKFPFLNLGLSDHD----MLW 56
Query: 55 EEDDELVSLISKERGETHLGSLDLHDGG---TRVEGVAWISKVSAHFGFSALTTVLAVSY 111
+ DDEL +LISK+ E L L D R + + WI KV +H+GF++LT +LAV+Y
Sbjct: 57 D-DDELSTLISKQ--EPCLYDEILDDEFLVLCREKALDWIFKVKSHYGFNSLTALLAVNY 113
Query: 112 FDRFITSPRFQRDKPWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRM 171
FDRFITS +FQ DKPWM+QL+A+ACLSLAAKVEE VP LLD QVEE+R+VFEAKTIQRM
Sbjct: 114 FDRFITSRKFQTDKPWMSQLTALACLSLAAKVEEIRVPFLLDFQVEEARYVFEAKTIQRM 173
Query: 172 ELLVLSTLKWRMHPVTPISFFEHIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLP 231
ELLVLSTL WRMHPVTPISFF+HIIRR K+ EFL RCE +LL++IPDSR +S+ P
Sbjct: 174 ELLVLSTLDWRMHPVTPISFFDHIIRRYSFKSHHQLEFLSRCESLLLSIIPDSRFLSFSP 233
Query: 232 STLAAAAMIHVIKEIEPFNATEYIDQLMGLLKISEEQVNQCYKLILKLLVCYEGISNLHP 291
S LA A M+ VI++++ + Y QLM LLK+ E+VN+CY+L+L + P
Sbjct: 234 SVLATAIMVSVIRDLKMCDEAVYQSQLMTLLKVDSEKVNKCYELVL----------DHSP 283
Query: 292 KRKR-----SEPSSPGGV----IDASFSCDSSNDSWATTSAVSTSLEPLFKRSRAQDQQM 342
+KR +P+SP GV + S +S S + + + S S EPL KR R Q+QQM
Sbjct: 284 SKKRMMNWMQQPASPIGVFDASFSSDSSNESWVVSASASVSSSPSSEPLLKRRRVQEQQM 343
Query: 343 RLPSVNRVSIDVL-NSPR 359
RL S+NR+ DVL +SPR
Sbjct: 344 RLSSINRMFFDVLSSSPR 361
>AT4G34160.1 | Symbols: CYCD3;1, CYCD3 | CYCLIN D3;1 |
chr4:16357903-16359304 FORWARD LENGTH=376
Length = 376
Score = 292 bits (747), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 159/304 (52%), Positives = 208/304 (68%), Gaps = 14/304 (4%)
Query: 1 MALR-EXXXXXXXSPSFL-DALLCEEQHTFDDDDEEKATHATECHTINDDPLI-----LF 53
MA+R E S SFL DAL CEE+ DDE + + + P + LF
Sbjct: 1 MAIRKEEESREEQSNSFLLDALYCEEEKW---DDEGEEVEENSSLSSSSSPFVVLQQDLF 57
Query: 54 WEEDDELVSLISKERGETHLGSLD-LHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYF 112
WE++D LV+L SKE E L LD ++ R E V WI +V+AH+GFS L VLA++Y
Sbjct: 58 WEDED-LVTLFSKEE-EQGLSCLDDVYLSTDRKEAVGWILRVNAHYGFSTLAAVLAITYL 115
Query: 113 DRFITSPRFQRDKPWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRME 172
D+FI S QRDKPWM QL +VACLSLAAKVEET VPLLLD QVEE+++VFEAKTIQRME
Sbjct: 116 DKFICSYSLQRDKPWMLQLVSVACLSLAAKVEETQVPLLLDFQVEETKYVFEAKTIQRME 175
Query: 173 LLVLSTLKWRMHPVTPISFFEHIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPS 232
LL+LSTL+W+MH +TPISF +HIIRRLGLK HW+FL +C R+LL+VI DSR + YLPS
Sbjct: 176 LLILSTLEWKMHLITPISFVDHIIRRLGLKNNAHWDFLNKCHRLLLSVISDSRFVGYLPS 235
Query: 233 TLAAAAMIHVIKEIEPFNATEYIDQLMGLLKISEEQVNQCYKLILKLLVCYEGIS-NLHP 291
+AAA M+ +I++++PF+ Y L+G+L +++E+V CY LIL+L V G+ +
Sbjct: 236 VVAAATMMRIIEQVDPFDPLSYQTNLLGVLNLTKEKVKTCYDLILQLPVDRIGLQIQIQS 295
Query: 292 KRKR 295
+KR
Sbjct: 296 SKKR 299
>AT2G22490.1 | Symbols: CYCD2;1, ATCYCD2;1 | Cyclin D2;1 |
chr2:9554157-9555873 REVERSE LENGTH=361
Length = 361
Score = 154 bits (389), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 96/244 (39%), Positives = 145/244 (59%), Gaps = 19/244 (7%)
Query: 74 GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSA 133
G LDL R + + WI KV AH+ F L L+++Y DRF+TS +DK W QL A
Sbjct: 90 GDLDL---SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLA 146
Query: 134 VACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFE 193
V+CLSLA+K+EET VP ++DLQVE+ +FVFEAKTI+RMELLV++TL WR+ +TP SF +
Sbjct: 147 VSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFID 206
Query: 194 HIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAMIHVIKEIEPFNATE 253
+ + ++ + ++R R +LN + + PS +AAAA + V E TE
Sbjct: 207 YFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGE----TE 260
Query: 254 YIDQ---LMGLLKISEEQVNQCYKLILKLLVCYEGISNLHPKRK------RSEPSSPGGV 304
ID+ L L+ + +E+V +C L ++ L E + ++ R+ P+SP GV
Sbjct: 261 CIDEEKALSSLIYVKQERVKRCLNL-MRSLTGEENVRGTSLSQEQARVAVRAVPASPVGV 319
Query: 305 IDAS 308
++A+
Sbjct: 320 LEAT 323
>AT2G22490.2 | Symbols: CYCD2;1 | Cyclin D2;1 | chr2:9554157-9555873
REVERSE LENGTH=362
Length = 362
Score = 149 bits (377), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 95/245 (38%), Positives = 143/245 (58%), Gaps = 20/245 (8%)
Query: 74 GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSA 133
G LDL R + + WI KV AH+ F L L+++Y DRF+TS +DK W QL A
Sbjct: 90 GDLDL---SVRNQALDWILKVCAHYHFGHLCICLSMNYLDRFLTSYELPKDKDWAAQLLA 146
Query: 134 VACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFE 193
V+CLSLA+K+EET VP ++DLQVE+ +FVFEAKTI+RMELLV++TL WR+ +TP SF +
Sbjct: 147 VSCLSLASKMEETDVPHIVDLQVEDPKFVFEAKTIKRMELLVVTTLNWRLQALTPFSFID 206
Query: 194 HIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAMIHVIKEIEPFNATE 253
+ + ++ + ++R R +LN + + PS +AAAA + V E TE
Sbjct: 207 YFVDKIS--GHVSENLIYRSSRFILNTTKAIEFLDFRPSEIAAAAAVSVSISGE----TE 260
Query: 254 YIDQLMGLLKI----SEEQVNQCYKLILKLLVCYEGISNLHPKRK------RSEPSSPGG 303
ID+ L + +E+V +C L ++ L E + ++ R+ P+SP G
Sbjct: 261 CIDEEKALSSLIYVKQQERVKRCLNL-MRSLTGEENVRGTSLSQEQARVAVRAVPASPVG 319
Query: 304 VIDAS 308
V++A+
Sbjct: 320 VLEAT 324
>AT1G70210.1 | Symbols: CYCD1;1, ATCYCD1;1 | CYCLIN D1;1 |
chr1:26440015-26441980 FORWARD LENGTH=339
Length = 339
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 127/238 (53%), Gaps = 20/238 (8%)
Query: 58 DELVSLISKER----GETHLGSLDLH--DGGTRVEGVAWISKVSAHFGFSALTTVLAVSY 111
D + I ER G +L D R + VAWI KV A++ F LT LAV+Y
Sbjct: 50 DSIACFIEDERHFVPGHDYLSRFQTRSLDASAREDSVAWILKVQAYYNFQPLTAYLAVNY 109
Query: 112 FDRFITSPRFQRDKPWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRM 171
DRF+ + R W QL AVACLSLAAK+EE VP L D QV +++FEAKTI+RM
Sbjct: 110 MDRFLYARRLPETSGWPMQLLAVACLSLAAKMEEILVPSLFDFQVAGVKYLFEAKTIKRM 169
Query: 172 ELLVLSTLKWRMHPVTPISFFEHIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLP 231
ELLVLS L WR+ VTP F ++ F+ ++L+ I ++ + Y P
Sbjct: 170 ELLVLSVLDWRLRSVTPFDFISFFAYKIDPSGTFLGFFISHATEIILSNIKEASFLEYWP 229
Query: 232 STLAAAAMIHVIKE-------IEPFNATE-YIDQLMGLLKISEEQVNQCYKLILKLLV 281
S++AAAA++ V E + P + E + D L S+E++ +CY+L+ + +
Sbjct: 230 SSIAAAAILCVANELPSLSSVVNPHESPETWCDGL------SKEKIVRCYRLMKAMAI 281
>AT5G65420.1 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=308
Length = 308
Score = 133 bits (334), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 128/241 (53%), Gaps = 19/241 (7%)
Query: 19 ALLCEEQHTFDDDDEEKATHATECHTINDDPLILFWEEDDELVSLISKERGETHL----- 73
+LLC E + DDE T P + F + + E + + E+ + HL
Sbjct: 9 SLLCTESNV---DDEGMIVDETPIEI--SIPQMGFSQSESEEIIMEMVEKEKQHLPSDDY 63
Query: 74 ------GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPW 127
G LDL+ G R + + WI K F L LA++Y DRF++ K W
Sbjct: 64 IKRLRSGDLDLNVG--RRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGW 121
Query: 128 MTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVT 187
+ QL AVACLSLAAK+EET VP+L+DLQV + +FVFEAK++QRMELLVL+ LKWR+ +T
Sbjct: 122 ILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAIT 181
Query: 188 PISFFEHIIRRLG-LKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAMIHVIKEI 246
P S+ + +R++ + R +V+ + + + PS +AAA + V E+
Sbjct: 182 PCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAAAVALSVSGEL 241
Query: 247 E 247
+
Sbjct: 242 Q 242
>AT5G65420.2 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26142110-26143750 REVERSE LENGTH=242
Length = 242
Score = 129 bits (323), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/192 (40%), Positives = 109/192 (56%), Gaps = 18/192 (9%)
Query: 19 ALLCEEQHTFDDDDEEKATHATECHTINDDPLILFWEEDDELVSLISKERGETHL----- 73
+LLC E + DDE T P + F + + E + + E+ + HL
Sbjct: 9 SLLCTESNV---DDEGMIVDETPIEI--SIPQMGFSQSESEEIIMEMVEKEKQHLPSDDY 63
Query: 74 ------GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPW 127
G LDL+ G R + + WI K F L LA++Y DRF++ K W
Sbjct: 64 IKRLRSGDLDLNVG--RRDALNWIWKACEVHQFGPLCFCLAMNYLDRFLSVHDLPSGKGW 121
Query: 128 MTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVT 187
+ QL AVACLSLAAK+EET VP+L+DLQV + +FVFEAK++QRMELLVL+ LKWR+ +T
Sbjct: 122 ILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLNKLKWRLRAIT 181
Query: 188 PISFFEHIIRRL 199
P S+ + +R++
Sbjct: 182 PCSYIRYFLRKM 193
>AT5G10440.1 | Symbols: CYCD4;2 | cyclin d4;2 | chr5:3280611-3282342
REVERSE LENGTH=298
Length = 298
Score = 127 bits (320), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 110/199 (55%), Gaps = 10/199 (5%)
Query: 56 EDDELV-SLISKERGET-------HLGSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVL 107
E +E+V +I KER + L + DL D R++ + WI K F L L
Sbjct: 34 ESEEIVREMIEKERQHSPRDDYLKRLRNGDL-DFNVRIQALGWIWKACEELQFGPLCICL 92
Query: 108 AVSYFDRFITSPRFQRDKPWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKT 167
A++Y DRF++ K W QL AVACLSLAAK+EET+VP L+ LQV FVFEAK+
Sbjct: 93 AMNYLDRFLSVHDLPSGKAWTVQLLAVACLSLAAKIEETNVPELMQLQVGAPMFVFEAKS 152
Query: 168 IQRMELLVLSTLKWRMHPVTPISFFEHIIRRL-GLKTRLHWEFLWRCERVLLNVIPDSRV 226
+QRMELLVL+ L+WR+ VTP S+ + + ++ G H + R +V+ +
Sbjct: 153 VQRMELLVLNVLRWRLRAVTPCSYVRYFLSKINGYDQEPHSRLVTRSLQVIASTTKGIDF 212
Query: 227 MSYLPSTLAAAAMIHVIKE 245
+ + S +AAA + V E
Sbjct: 213 LEFRASEIAAAVALSVSGE 231
>AT5G65420.3 | Symbols: CYCD4;1 | CYCLIN D4;1 |
chr5:26141592-26143750 REVERSE LENGTH=318
Length = 318
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 29/251 (11%)
Query: 19 ALLCEEQHTFDDDDEEKATHATECHTINDDPLILFWEEDDELVSLISKERGETHL----- 73
+LLC E + DDE T P + F + + E + + E+ + HL
Sbjct: 9 SLLCTESNV---DDEGMIVDETPIEI--SIPQMGFSQSESEEIIMEMVEKEKQHLPSDDY 63
Query: 74 ------GSLDLHDGGTRVEGVAWISKVSAH----------FGFSALTTVLAVSYFDRFIT 117
G LDL+ G R + + WI K+ F L LA++Y DRF++
Sbjct: 64 IKRLRSGDLDLNVG--RRDALNWIWKIRGLCRTDREACEVHQFGPLCFCLAMNYLDRFLS 121
Query: 118 SPRFQRDKPWMTQLSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLS 177
K W+ QL AVACLSLAAK+EET VP+L+DLQV + +FVFEAK++QRMELLVL+
Sbjct: 122 VHDLPSGKGWILQLLAVACLSLAAKIEETEVPMLIDLQVGDPQFVFEAKSVQRMELLVLN 181
Query: 178 TLKWRMHPVTPISFFEHIIRRLG-LKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAA 236
LKWR+ +TP S+ + +R++ + R +V+ + + + PS +AA
Sbjct: 182 KLKWRLRAITPCSYIRYFLRKMSKCDQEPSNTLISRSLQVIASTTKGIDFLEFRPSEVAA 241
Query: 237 AAMIHVIKEIE 247
A + V E++
Sbjct: 242 AVALSVSGELQ 252
>AT4G03270.1 | Symbols: CYCD6;1 | Cyclin D6;1 | chr4:1432375-1433691
REVERSE LENGTH=302
Length = 302
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 107/199 (53%), Gaps = 8/199 (4%)
Query: 82 GTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSAVACLSLAA 141
R + ++ I++ S F +LT LAV+Y DRF++S + KPW+ +L +++C+SL+A
Sbjct: 56 SNRNQAISSITQYSRKFDDPSLT-YLAVNYLDRFLSSEDMPQSKPWILKLISLSCVSLSA 114
Query: 142 KVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIIRRLGL 201
K+ + + + DL VE F+A+ I+RME ++L LKWRM VTP SF I L
Sbjct: 115 KMRKPDMS-VSDLPVEGE--FFDAQMIERMENVILGALKWRMRSVTPFSFLAFFISLFEL 171
Query: 202 KTR----LHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAMIHVIKEIEPFNATEYIDQ 257
K L + + ++ D + + PS +A AA++ E+ P + ++
Sbjct: 172 KEEDPLLLKHSLKSQTSDLTFSLQHDISFLEFKPSVIAGAALLFASFELCPLQFPCFSNR 231
Query: 258 LMGLLKISEEQVNQCYKLI 276
+ ++++++ +CYK I
Sbjct: 232 INQCTYVNKDELMECYKAI 250
>AT4G37630.2 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=321
Length = 321
Score = 94.4 bits (233), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 61/187 (32%), Positives = 93/187 (49%), Gaps = 16/187 (8%)
Query: 20 LLCEEQHTF---DDDDEEKATHATECH---TINDDPLILFWEEDDELVSLISKERGETHL 73
LC E + DDD+ + + E H TI+D+ D + L+ KE
Sbjct: 11 FLCHESESSLNEDDDETIERSDKQEPHFTTTIDDE---------DYVADLVLKENLRFET 61
Query: 74 GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSA 133
R+ + WI FGF T +A+SYFD F+ +D+ W +L +
Sbjct: 62 LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFLHKRFIGKDETWAMRLLS 121
Query: 134 VACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFE 193
VACLSLAAK+EE VP L ++ FVF+ I++ ELL+LSTL W+M+ +TP +F
Sbjct: 122 VACLSLAAKMEERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFHYFN 180
Query: 194 HIIRRLG 200
+ + ++
Sbjct: 181 YFLAKIS 187
>AT4G37630.1 | Symbols: CYCD5;1 | cyclin d5;1 |
chr4:17679497-17680788 FORWARD LENGTH=323
Length = 323
Score = 94.0 bits (232), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 20/190 (10%)
Query: 20 LLCEEQHTF---DDDDEEKATHATECH---TINDDPLILFWEEDDELVSLISKERGETHL 73
LC E + DDD+ + + E H TI+D+ D + L+ KE
Sbjct: 11 FLCHESESSLNEDDDETIERSDKQEPHFTTTIDDE---------DYVADLVLKENLRFET 61
Query: 74 GSLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRF---QRDKPWMTQ 130
R+ + WI FGF T +A+SYFD F+ RF Q+D+ W +
Sbjct: 62 LPSKTTSSSDRLIAIDWILTTRTRFGFQHQTAYIAISYFDLFL-HKRFIGLQKDETWAMR 120
Query: 131 LSAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPIS 190
L +VACLSLAAK+EE VP L ++ FVF+ I++ ELL+LSTL W+M+ +TP
Sbjct: 121 LLSVACLSLAAKMEERIVPGLSQYP-QDHDFVFKPDVIRKTELLILSTLDWKMNLITPFH 179
Query: 191 FFEHIIRRLG 200
+F + + ++
Sbjct: 180 YFNYFLAKIS 189
>AT5G02110.1 | Symbols: CYCD7;1, CYCD7 | CYCLIN D7;1 |
chr5:417087-418553 FORWARD LENGTH=341
Length = 341
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 82/156 (52%), Gaps = 2/156 (1%)
Query: 84 RVEGVAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSAVACLSLAAKV 143
R W+ + + S T A + FDRF+ WM +L AV LS+A+K
Sbjct: 78 RFHAFQWLIQTRSRLNLSYETVFSAANCFDRFVYMTCCDEWTNWMVELVAVTSLSIASKF 137
Query: 144 EETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHIIRRLGLKT 203
E PLL +L++E +F T+ +MEL++L L+WR++ VT +F + ++ ++G+
Sbjct: 138 NEVTTPLLEELEMEGLTHMFHVNTVAQMELIILKALEWRVNAVTSYTFSQTLVSKIGMVG 197
Query: 204 RLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAM 239
+ R LL+VI D +++ Y PS +A AA+
Sbjct: 198 --DHMIMNRITNHLLDVICDLKMLQYPPSVVATAAI 231
>AT1G77390.1 | Symbols: TAM, CYCA1;2, DYP, CYCA1 | CYCLIN A1;2 |
chr1:29081904-29084137 REVERSE LENGTH=442
Length = 442
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 88 VAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSAVACLSLAAKVEETH 147
+ W+ +V+ + S T LAV+Y DR++T + QL V C+ +AAK EE
Sbjct: 216 IDWLVEVAEEYRLSPETLYLAVNYVDRYLTGNAINKQN---LQLLGVTCMMIAAKYEEVC 272
Query: 148 VPLLLDLQVEESRFVFEAKTIQRMELL-----VLSTLKWRMHPVTPISFFEHIIRRLGLK 202
VP QVE+ ++ + T R ELL VL+ LK+ + T F +R +
Sbjct: 273 VP-----QVEDFCYITD-NTYLRNELLEMESSVLNYLKFELTTPTAKCFLRRFLRAAQGR 326
Query: 203 TRLHWEFLWRCERVLLNVIP--DSRVMSYLPSTLAAAAMIHVIKEI----EPFNATEYID 256
+ L C L + D ++ Y PS +AA+A+ + +P+NAT
Sbjct: 327 KEVP-SLLSECLACYLTELSLLDYAMLRYAPSLVAASAVFLAQYTLHPSRKPWNAT---- 381
Query: 257 QLMGLLKISEEQVNQCYKLILKLLVCYEGIS 287
L + + C K +L+L C E +S
Sbjct: 382 -LEHYTSYRAKHMEACVKNLLQL--CNEKLS 409
>AT1G20610.1 | Symbols: CYCB2;3 | Cyclin B2;3 | chr1:7135073-7137273
REVERSE LENGTH=429
Length = 429
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 75/163 (46%), Gaps = 10/163 (6%)
Query: 79 HDGGTRVEGVA--WISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSAVAC 136
D R+ G+ W+ +V F T L ++ DRF+ + R K QL V
Sbjct: 203 QDLNERMRGILIDWLIEVHYKFELMEETLYLTINVIDRFLAVHQIVRKK---LQLVGVTA 259
Query: 137 LSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISFFEHII 196
L LA K EE VP++ DL + + + + + ME L+ +TL++ TP F + +
Sbjct: 260 LLLACKYEEVSVPVVDDLILISDK-AYSRREVLDMEKLMANTLQFNFSLPTPYVFMKRFL 318
Query: 197 RRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAM 239
+ +L + E L+ + ++ YLPS LAA+A+
Sbjct: 319 KAAQSDKKLEILSFFMIELCLV----EYEMLEYLPSKLAASAI 357
>AT1G44110.1 | Symbols: CYCA1;1 | Cyclin A1;1 |
chr1:16775035-16777182 REVERSE LENGTH=460
Length = 460
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 86/189 (45%), Gaps = 29/189 (15%)
Query: 80 DGGTRVEG--VAWISKVSAHFGFSALTTVLAVSYFDRFITSPRFQRDKPWMTQLSAVACL 137
D + + G V W+ +VS + T L V+Y DR+++ R K QL VAC+
Sbjct: 222 DVNSSMRGILVDWLIEVSEEYRLVPETLYLTVNYIDRYLSGNVISRQK---LQLLGVACM 278
Query: 138 SLAAKVEETHVPLLLDLQVEESRFVFEAKTIQ----RMELLVLSTLKWRMHPVTPISFFE 193
+AAK EE P QVEE ++ + ++ ME VL+ LK+ M T F
Sbjct: 279 MIAAKYEEICAP-----QVEEFCYITDNTYLKDEVLDMESDVLNYLKFEMTAPTTKCFLR 333
Query: 194 HIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYL-----PSTLAAAAMIHVIKEI-- 246
+R +H L + E + N I + ++ Y PS +AA+A I + K I
Sbjct: 334 RFVRAAH---GVHEAPLMQLE-CMANYIAELSLLEYTMLSHSPSLVAASA-IFLAKYILD 388
Query: 247 ---EPFNAT 252
P+N+T
Sbjct: 389 PTRRPWNST 397
>AT3G11520.1 | Symbols: CYCB1;3, CYC2 | CYCLIN B1;3 |
chr3:3625475-3627139 REVERSE LENGTH=414
Length = 414
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 100/228 (43%), Gaps = 22/228 (9%)
Query: 15 SFLDALLCEEQHTFDDDDEEKATHATECHTINDDPLILFWEEDDELVSLISKERGETHLG 74
S LDA T D D +K + D + +F++E ++++ + + ++
Sbjct: 130 SVLDARSKAASKTLDIDYVDKENDLAAVEYVED--MYIFYKE------VVNESKPQMYMH 181
Query: 75 SLDLHDGGTRVEGVAWISKVSAHFGFSALTTVLAVSYFDRFI---TSPRFQRDKPWMTQL 131
+ D R + W+ +V F S T L V+ DRF+ T PR + QL
Sbjct: 182 TQPEIDEKMRSILIDWLVEVHVKFDLSPETLYLTVNIIDRFLSLKTVPRRE------LQL 235
Query: 132 SAVACLSLAAKVEETHVPLLLDLQVEESRFVFEAKTIQRMELLVLSTLKWRMHPVTPISF 191
V+ L +A+K EE P + DL V + + ++ I ME +L L+W + T F
Sbjct: 236 VGVSALLIASKYEEIWPPQVNDL-VYVTDNSYNSRQILVMEKTILGNLEWYLTVPTQYVF 294
Query: 192 FEHIIRRLGLKTRLHWEFLWRCERVLLNVIPDSRVMSYLPSTLAAAAM 239
I+ G +L + E L++ DS + + PS LAA+A+
Sbjct: 295 LVRFIKASGSDQKLENLVHFLAELGLMH--HDS--LMFCPSMLAASAV 338