Miyakogusa Predicted Gene
- Lj0g3v0139329.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0139329.1 Non Chatacterized Hit- tr|I1MVT1|I1MVT1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.7205
PE=,76.49,0,seg,NULL; CYCLIN-D,NULL; CYCLINE,NULL; domain present in
cyclins, TFIIB and Retinob,Cyclin-like; no ,CUFF.8475.1
(1083 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65276 similar to UniRef100_A7PLG7 Cluster: Chromosome... 2076 0.0
gnl|LJGI|GO009757 similar to UniRef100_Q2ABE6 Cluster: Cyclin D3... 151 1e-35
gnl|LJGI|BP066800 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin ... 96 5e-19
gnl|LJGI|DC594447 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3... 80 3e-14
gnl|LJGI|TC60852 similar to UniRef100_Q40338 Cluster: Cyclin; n=... 80 3e-14
gnl|LJGI|FS322630 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin ... 72 8e-12
gnl|LJGI|TC58388 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3;... 52 7e-06
>gnl|LJGI|TC65276 similar to UniRef100_A7PLG7 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (68%)
Length = 1496
Score = 2076 bits (1047), Expect = 0.0
Identities = 1047/1047 (100%)
Strand = Plus / Plus
Query: 37 tctccctcattcctcgatgcccttctctgtgaagagcaacatacatttgatgatgatgat 96
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 176 tctccctcattcctcgatgcccttctctgtgaagagcaacatacatttgatgatgatgat 235
Query: 97 gaagaaaaagccactcatgctactgagtgtcacaccattaacgatgacccactcatcctg 156
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 236 gaagaaaaagccactcatgctactgagtgtcacaccattaacgatgacccactcatcctg 295
Query: 157 ttctgggaggaggatgatgagcttgtctcgttaatctcgaaggaacgtggagagacccat 216
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 ttctgggaggaggatgatgagcttgtctcgttaatctcgaaggaacgtggagagacccat 355
Query: 217 ttgggttctctcgatcttcatgatggagggactcgtgttgagggtgtggcttggatttct 276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ttgggttctctcgatcttcatgatggagggactcgtgttgagggtgtggcttggatttct 415
Query: 277 aaagtctctgcgcattttggcttttctgctttgactactgttcttgctgtgagctacttt 336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaagtctctgcgcattttggcttttctgctttgactactgttcttgctgtgagctacttt 475
Query: 337 gataggttcattactagccccaggtttcaaagggacaagccatggatgacgcagcttagt 396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 gataggttcattactagccccaggtttcaaagggacaagccatggatgacgcagcttagt 535
Query: 397 gctgttgcgtgtttgtctctggctgctaaagtggaggagacccatgtgcctcttttgttg 456
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 gctgttgcgtgtttgtctctggctgctaaagtggaggagacccatgtgcctcttttgttg 595
Query: 457 gatcttcaagtggaggaatcaaggttcgtgtttgaagcaaagactatacagagaatggag 516
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 gatcttcaagtggaggaatcaaggttcgtgtttgaagcaaagactatacagagaatggag 655
Query: 517 cttctagttttgtcaactctgaaatggaggatgcatcctgtgaccccaatttccttcttt 576
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 cttctagttttgtcaactctgaaatggaggatgcatcctgtgaccccaatttccttcttt 715
Query: 577 gaacacattatcagaaggcttggtttaaagacccgcttgcactgggaattcttgtggcgc 636
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 gaacacattatcagaaggcttggtttaaagacccgcttgcactgggaattcttgtggcgc 775
Query: 637 tgtgagcgagttcttctcaatgtcattccagattcaagggttatgagttatcttccttct 696
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 776 tgtgagcgagttcttctcaatgtcattccagattcaagggttatgagttatcttccttct 835
Query: 697 acattggctgctgctgcaatgatccatgttattaaagagattgaaccatttaatgcaact 756
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 836 acattggctgctgctgcaatgatccatgttattaaagagattgaaccatttaatgcaact 895
Query: 757 gagtacattgatcagcttatgggtttactgaagataagtgaggaacaagtgaaccagtgc 816
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 gagtacattgatcagcttatgggtttactgaagataagtgaggaacaagtgaaccagtgc 955
Query: 817 tacaagctcatactgaagctgttagtctgctatgaaggcatttccaatcttcacccgaag 876
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 tacaagctcatactgaagctgttagtctgctatgaaggcatttccaatcttcacccgaag 1015
Query: 877 cgcaagcgatctgaaccgagtagcccggggggtgttattgatgcatctttcagctgtgac 936
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1016 cgcaagcgatctgaaccgagtagcccggggggtgttattgatgcatctttcagctgtgac 1075
Query: 937 agctcaaatgattcatgggccacaacatcagctgtctcgacttcactggagccactgttt 996
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1076 agctcaaatgattcatgggccacaacatcagctgtctcgacttcactggagccactgttt 1135
Query: 997 aagaggagcagagctcaggaccagcagatgcggttgccttctgtgaaccgcgtgtccatt 1056
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1136 aagaggagcagagctcaggaccagcagatgcggttgccttctgtgaaccgcgtgtccatt 1195
Query: 1057 gatgttcttaatagccctcgctaataa 1083
|||||||||||||||||||||||||||
Sbjct: 1196 gatgttcttaatagccctcgctaataa 1222
>gnl|LJGI|GO009757 similar to UniRef100_Q2ABE6 Cluster: Cyclin D3-2; n=1; Camellia
sinensis|Rep: Cyclin D3-2 - Camellia sinensis (Tea),
partial (32%)
Length = 744
Score = 151 bits (76), Expect = 1e-35
Identities = 228/278 (82%), Gaps = 3/278 (1%)
Strand = Plus / Plus
Query: 302 ctgctttgactactgttcttgctgtgagctactttgataggttcattactagccccaggt 361
|||||||||| ||||||||||| || | ||||||||| |||||| | | | || | ||
Sbjct: 304 ctgctttgaccactgttcttgcagttaactactttgacaggttcgtatcgaccctgaagt 363
Query: 362 ttcaaagggacaagccatggatgacgcagcttagtgctgttgcgtgtttgtctctggctg 421
|||| | ||| |||||||||||||| || || | ||| || | ||||||||||| ||||
Sbjct: 364 ttcagatggataagccatggatgactcacctcactgcagtcacctgtttgtctcttgctg 423
Query: 422 ctaaagtggaggagacccatgtgcctcttttgttggatcttca---agtggaggaatcaa 478
| ||| |||| || ||||| ||||| ||| | ||||| ||||| |||||||||||||
Sbjct: 424 caaaaatggaagaaacccaagtgccacttcttttggaccttcagcaagtggaggaatcag 483
Query: 479 ggttcgtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctga 538
|||| |||||||||||||||| ||||||||||||||||| || || ||||||||||| |
Sbjct: 484 agttcttgtttgaagcaaagaccatacagagaatggagctacttgtgttgtcaactctta 543
Query: 539 aatggaggatgcatcctgtgaccccaatttccttcttt 576
| ||||| ||| | ||||| ||||||||||||||||||
Sbjct: 544 attggagaatgaaccctgttaccccaatttccttcttt 581
>gnl|LJGI|BP066800 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(16%)
Length = 496
Score = 95.6 bits (48), Expect = 5e-19
Identities = 132/160 (82%)
Strand = Plus / Plus
Query: 484 gtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctgaaatgg 543
|||||||| ||||||||||| | || |||||||||||||||| |||| || || ||||||
Sbjct: 329 gtgtttgaggcaaagactattctgaaaatggagcttctagttctgtccacactcaaatgg 388
Query: 544 aggatgcatcctgtgaccccaatttccttctttgaacacattatcagaaggcttggttta 603
| ||||||||||||||| ||| |||| || | || |||| ||||||||||||||| ||
Sbjct: 389 aagatgcatcctgtgactccactttcatttctagatcacagtatcagaaggcttggattg 448
Query: 604 aagacccgcttgcactgggaattcttgtggcgctgtgagc 643
|| |||| | | |||||||| || | ||||||||||||
Sbjct: 449 aaaacccaccttcactgggagtttctcaggcgctgtgagc 488
>gnl|LJGI|DC594447 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(15%)
Length = 579
Score = 79.8 bits (40), Expect = 3e-14
Identities = 97/116 (83%)
Strand = Plus / Plus
Query: 484 gtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctgaaatgg 543
|||||||| ||||||||||| | || |||||||||||| ||| |||| || || ||||||
Sbjct: 422 gtgtttgaggcaaagactattctgaaaatggagcttctggttctgtccacactcaaatgg 481
Query: 544 aggatgcatcctgtgaccccaatttccttctttgaacacattatcagaaggcttgg 599
| |||| |||||||||| ||| |||| || | || |||||||||| |||||||||
Sbjct: 482 aagatgtatcctgtgactccactttcatttctggatcacattatcaaaaggcttgg 537
>gnl|LJGI|TC60852 similar to UniRef100_Q40338 Cluster: Cyclin; n=1; Medicago
sativa|Rep: Cyclin - Medicago sativa (Alfalfa), partial
(47%)
Length = 1364
Score = 79.8 bits (40), Expect = 3e-14
Identities = 130/160 (81%)
Strand = Plus / Plus
Query: 484 gtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctgaaatgg 543
|||||||| ||||||||||| | || |||||||||||| ||| |||| || || ||||||
Sbjct: 374 gtgtttgaggcaaagactattctgaaaatggagcttctggttctgtccacactcaaatgg 433
Query: 544 aggatgcatcctgtgaccccaatttccttctttgaacacattatcagaaggcttggttta 603
| |||| |||||||||| ||| |||| || | || |||||||||| ||||||||| ||
Sbjct: 434 aagatgtatcctgtgactccactttcatttctggatcacattatcaaaaggcttggattg 493
Query: 604 aagacccgcttgcactgggaattcttgtggcgctgtgagc 643
|| |||| | | |||||||| || | ||||||||||||
Sbjct: 494 aaaacccaccttcactgggagtttctcaggcgctgtgagc 533
>gnl|LJGI|FS322630 homologue to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(18%)
Length = 646
Score = 71.9 bits (36), Expect = 8e-12
Identities = 129/160 (80%)
Strand = Plus / Plus
Query: 484 gtgtttgaagcaaagactatacagagaatggagcttctagttttgtcaactctgaaatgg 543
|||||||| | ||||||||| | || |||||||||||| ||| |||| || || ||||||
Sbjct: 446 gtgtttgaggaaaagactattctgaaaatggagcttctggttctgtccacactcaaatgg 505
Query: 544 aggatgcatcctgtgaccccaatttccttctttgaacacattatcagaaggcttggttta 603
| |||| |||||||||| ||| |||| || | || |||||||||| ||||||||| ||
Sbjct: 506 aagatgtatcctgtgactccactttcatttctggatcacattatcaaaaggcttggattg 565
Query: 604 aagacccgcttgcactgggaattcttgtggcgctgtgagc 643
|| |||| | | |||||||| || | ||||||||||||
Sbjct: 566 aaaacccaccttcactgggagtttctcaggcgctgtgagc 605
>gnl|LJGI|TC58388 similar to UniRef100_Q6T2Z6 Cluster: Cyclin d3; n=1; Glycine
max|Rep: Cyclin d3 - Glycine max (Soybean), partial
(45%)
Length = 885
Score = 52.0 bits (26), Expect = 7e-06
Identities = 134/170 (78%)
Strand = Plus / Plus
Query: 361 tttcaaagggacaagccatggatgacgcagcttagtgctgttgcgtgtttgtctctggct 420
|||||||| || ||||||||||||| |||||| ||||||| | || | ||| ||||
Sbjct: 706 tttcaaagtgagaagccatggatgatccagcttgctgctgttacttgcatctctttggca 765
Query: 421 gctaaagtggaggagacccatgtgcctcttttgttggatcttcaagtggaggaatcaagg 480
|||||||| || || ||||| ||||| ||| | || || ||||||||| | || | | |
Sbjct: 766 gctaaagttgaagaaacccaagtgccacttctcttagaccttcaagtgcaagatgctaag 825
Query: 481 ttcgtgtttgaagcaaagactatacagagaatggagcttctagttttgtc 530
|| |||||||| |||||||| || | || |||||||||||| ||| ||||
Sbjct: 826 tttgtgtttgaggcaaagaccattctgaaaatggagcttctggttctgtc 875