Miyakogusa Predicted Gene

Lj0g3v0135949.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135949.2 Non Characterized Hit- tr|I3SQ12|I3SQ12_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.2,0,PALP,Tryptophan synthase beta subunit-like PLP-dependent
enzymes superfamily; no description,NULL; 1,CUFF.8350.2
         (332 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g107670.1 | 1-aminocyclopropane-1-carboxylate deaminase, p...   592   e-169
Medtr8g107670.3 | 1-aminocyclopropane-1-carboxylate deaminase, p...   546   e-156
Medtr8g107670.2 | 1-aminocyclopropane-1-carboxylate deaminase, p...   483   e-137

>Medtr8g107670.1 | 1-aminocyclopropane-1-carboxylate deaminase,
           putative | HC | chr8:45526885-45519813 | 20130731
          Length = 388

 Score =  592 bits (1526), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 284/329 (86%), Positives = 299/329 (90%)

Query: 4   SSFDFLSVKPYTPPSWASHLHPLPSHIFSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 63
           + F+FLSVKPYT PSWAS+L P+PSHI SLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG
Sbjct: 14  AGFEFLSVKPYTAPSWASYLDPIPSHIVSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 73

Query: 64  MQLSGNKVRKLEFLMADAIAQGADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 123
           MQLSGNKVRKLEFLMADAIA+ ADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL
Sbjct: 74  MQLSGNKVRKLEFLMADAIAESADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 133

Query: 124 LVDQDPGLIGNLLVERFVGAHLQLISKEEYAQIGSVTLTNILKEKLIKEGRKPYVIPVGG 183
           LVDQDP L GNLLVER +GAHLQLISKEEY+QIGSVTL N+LKEKLI +GR+PYVIPVGG
Sbjct: 134 LVDQDPTLTGNLLVERLIGAHLQLISKEEYSQIGSVTLANLLKEKLINQGRRPYVIPVGG 193

Query: 184 SNSVGTWGYIESVREIEQQIQSGTSNVKFDDIVVACXXXXXXXXXXXXXXXXXXKARVHA 243
           SNS+GTWGY+E+VREIE QIQSGTSNVKFDDIVVAC                  KARVHA
Sbjct: 194 SNSLGTWGYLEAVREIELQIQSGTSNVKFDDIVVACGSGGTIAGLALGSSLSTLKARVHA 253

Query: 244 FSVCDDPDYFHDFVQGLLDGLKAGVNSRDIVHIQNAKGLGYAMNTSEELKFVKEVAEATG 303
           FSVCDDPDYFH+FVQGLLDGLKAGV+SRDIVHIQNAKGLGYAMNTSEEL FVKEVAEATG
Sbjct: 254 FSVCDDPDYFHNFVQGLLDGLKAGVSSRDIVHIQNAKGLGYAMNTSEELNFVKEVAEATG 313

Query: 304 VVLDPVYSGKAAYAMLKDMNENPKKWEGR 332
           VVLDPVYSGKAAYAMLKDMNENPKKWEGR
Sbjct: 314 VVLDPVYSGKAAYAMLKDMNENPKKWEGR 342


>Medtr8g107670.3 | 1-aminocyclopropane-1-carboxylate deaminase,
           putative | HC | chr8:45526885-45519813 | 20130731
          Length = 321

 Score =  546 bits (1407), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 262/307 (85%), Positives = 277/307 (90%)

Query: 4   SSFDFLSVKPYTPPSWASHLHPLPSHIFSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 63
           + F+FLSVKPYT PSWAS+L P+PSHI SLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG
Sbjct: 14  AGFEFLSVKPYTAPSWASYLDPIPSHIVSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 73

Query: 64  MQLSGNKVRKLEFLMADAIAQGADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 123
           MQLSGNKVRKLEFLMADAIA+ ADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL
Sbjct: 74  MQLSGNKVRKLEFLMADAIAESADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 133

Query: 124 LVDQDPGLIGNLLVERFVGAHLQLISKEEYAQIGSVTLTNILKEKLIKEGRKPYVIPVGG 183
           LVDQDP L GNLLVER +GAHLQLISKEEY+QIGSVTL N+LKEKLI +GR+PYVIPVGG
Sbjct: 134 LVDQDPTLTGNLLVERLIGAHLQLISKEEYSQIGSVTLANLLKEKLINQGRRPYVIPVGG 193

Query: 184 SNSVGTWGYIESVREIEQQIQSGTSNVKFDDIVVACXXXXXXXXXXXXXXXXXXKARVHA 243
           SNS+GTWGY+E+VREIE QIQSGTSNVKFDDIVVAC                  KARVHA
Sbjct: 194 SNSLGTWGYLEAVREIELQIQSGTSNVKFDDIVVACGSGGTIAGLALGSSLSTLKARVHA 253

Query: 244 FSVCDDPDYFHDFVQGLLDGLKAGVNSRDIVHIQNAKGLGYAMNTSEELKFVKEVAEATG 303
           FSVCDDPDYFH+FVQGLLDGLKAGV+SRDIVHIQNAKGLGYAMNTSEEL FVKEVAEATG
Sbjct: 254 FSVCDDPDYFHNFVQGLLDGLKAGVSSRDIVHIQNAKGLGYAMNTSEELNFVKEVAEATG 313

Query: 304 VVLDPVY 310
           VVLDPVY
Sbjct: 314 VVLDPVY 320


>Medtr8g107670.2 | 1-aminocyclopropane-1-carboxylate deaminase,
           putative | HC | chr8:45526885-45519813 | 20130731
          Length = 295

 Score =  483 bits (1244), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 231/275 (84%), Positives = 246/275 (89%)

Query: 4   SSFDFLSVKPYTPPSWASHLHPLPSHIFSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 63
           + F+FLSVKPYT PSWAS+L P+PSHI SLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG
Sbjct: 14  AGFEFLSVKPYTAPSWASYLDPIPSHIVSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 73

Query: 64  MQLSGNKVRKLEFLMADAIAQGADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 123
           MQLSGNKVRKLEFLMADAIA+ ADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL
Sbjct: 74  MQLSGNKVRKLEFLMADAIAESADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 133

Query: 124 LVDQDPGLIGNLLVERFVGAHLQLISKEEYAQIGSVTLTNILKEKLIKEGRKPYVIPVGG 183
           LVDQDP L GNLLVER +GAHLQLISKEEY+QIGSVTL N+LKEKLI +GR+PYVIPVGG
Sbjct: 134 LVDQDPTLTGNLLVERLIGAHLQLISKEEYSQIGSVTLANLLKEKLINQGRRPYVIPVGG 193

Query: 184 SNSVGTWGYIESVREIEQQIQSGTSNVKFDDIVVACXXXXXXXXXXXXXXXXXXKARVHA 243
           SNS+GTWGY+E+VREIE QIQSGTSNVKFDDIVVAC                  KARVHA
Sbjct: 194 SNSLGTWGYLEAVREIELQIQSGTSNVKFDDIVVACGSGGTIAGLALGSSLSTLKARVHA 253

Query: 244 FSVCDDPDYFHDFVQGLLDGLKAGVNSRDIVHIQN 278
           FSVCDDPDYFH+FVQGLLDGLKAGV+SRDIVHIQN
Sbjct: 254 FSVCDDPDYFHNFVQGLLDGLKAGVSSRDIVHIQN 288