Miyakogusa Predicted Gene

Lj0g3v0135949.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0135949.2 Non Chatacterized Hit- tr|I3SQ12|I3SQ12_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,98.2,0,PALP,Tryptophan synthase beta subunit-like PLP-dependent
enzymes superfamily; no description,NULL; 1,CUFF.8350.2
         (332 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G48420.1 | Symbols: D-CDES, ATACD1, ACD1 | D-cysteine desulfh...   483   e-136

>AT1G48420.1 | Symbols: D-CDES, ATACD1, ACD1 | D-cysteine
           desulfhydrase | chr1:17896767-17898803 REVERSE
           LENGTH=401
          Length = 401

 Score =  483 bits (1242), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/329 (72%), Positives = 274/329 (83%)

Query: 4   SSFDFLSVKPYTPPSWASHLHPLPSHIFSLAHLPTPIHRWNLPNLPANTEVWLKRDDLSG 63
           S  DFL+ KPY+PPSWASHL PLPSH FSLAHLPTPIHRWNLP LP  TE+W+KRDD +G
Sbjct: 27  SMADFLTKKPYSPPSWASHLRPLPSHTFSLAHLPTPIHRWNLPGLPNGTELWIKRDDFTG 86

Query: 64  MQLSGNKVRKLEFLMADAIAQGADSVITIGGIQSNHCRATAVAAKYLNLDPFLILRTSKL 123
           M+LSGNKVRKLEFLMA+A+ Q AD+VITIGGIQSNHCRATA A+ YLNL+  LILRTSKL
Sbjct: 87  MELSGNKVRKLEFLMAEAVDQHADTVITIGGIQSNHCRATATASNYLNLNSHLILRTSKL 146

Query: 124 LVDQDPGLIGNLLVERFVGAHLQLISKEEYAQIGSVTLTNILKEKLIKEGRKPYVIPVGG 183
           L D+DPGL+GNLLVER VGA++ LISKEEY+ IGS  LTN LKEKL KEG+KPYVIPVGG
Sbjct: 147 LADEDPGLVGNLLVERLVGANVHLISKEEYSSIGSEALTNALKEKLEKEGKKPYVIPVGG 206

Query: 184 SNSVGTWGYIESVREIEQQIQSGTSNVKFDDIVVACXXXXXXXXXXXXXXXXXXKARVHA 243
           SNS+GTWGYIE+ REIE+Q+     ++KFDDIVVAC                  KA+VHA
Sbjct: 207 SNSLGTWGYIEAAREIEEQLNYRPDDLKFDDIVVACGSGGTIAGISLGSWLGALKAKVHA 266

Query: 244 FSVCDDPDYFHDFVQGLLDGLKAGVNSRDIVHIQNAKGLGYAMNTSEELKFVKEVAEATG 303
           FSVCDDPDYF+DFVQGLLDGL AGVNSRDIV+I NAKG GYAMNTSEEL+FVK+VA +TG
Sbjct: 267 FSVCDDPDYFYDFVQGLLDGLHAGVNSRDIVNIHNAKGKGYAMNTSEELEFVKKVASSTG 326

Query: 304 VVLDPVYSGKAAYAMLKDMNENPKKWEGR 332
           V+LDPVYSGKAAY ++ ++ ++PK WEGR
Sbjct: 327 VILDPVYSGKAAYGLINEITKDPKCWEGR 355