Miyakogusa Predicted Gene

Lj0g3v0131719.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0131719.1 Non Characterized Hit- tr|I1MTZ5|I1MTZ5_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.20801
PE,42.42,0.000000006, ,CUFF.8007.1
         (85 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g116480.1 | E3 ubiquitin-protein ligase RING1-like protein...    54   2e-08

>Medtr4g116480.1 | E3 ubiquitin-protein ligase RING1-like protein,
          putative | HC | chr4:48253327-48252515 | 20130731
          Length = 96

 Score = 54.3 bits (129), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 17/77 (22%)

Query: 6  GVKCARKRRLHQSGAH-DSIKQS--------------PSSLHRNPEEEHLD--LGGEAME 48
          GV+CAR+RRL++S    DS K+S              P+S  R  +  + D  LGG A E
Sbjct: 4  GVECARRRRLYKSKVESDSTKRSFCLYTRNLKSTTSSPTSFLRQNQYSYPDEKLGGSARE 63

Query: 49 AKRRLDEKFSTHMKPKN 65
          AKRRLDEKF+  MK +N
Sbjct: 64 AKRRLDEKFTASMKSEN 80