Miyakogusa Predicted Gene

Lj0g3v0125929.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0125929.1 tr|B9HHB6|B9HHB6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1083067 PE=4
SV=1,33.16,0.0000000004,seg,NULL,CUFF.7556.1
         (189 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma01g39650.1                                                       149   2e-36
Glyma11g05610.1                                                       119   1e-27

>Glyma01g39650.1 
          Length = 588

 Score =  149 bits (376), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 91/194 (46%), Positives = 112/194 (57%), Gaps = 39/194 (20%)

Query: 1   MVDYNGTLPTRTKANPASKGSDSSTSNVVAGARPTTNSSESKVPRNGXXXXXXXXXXXXA 60
           M+DYNGTLP  TK+NPASKGSD +TSN + G + TT                        
Sbjct: 429 MIDYNGTLPANTKSNPASKGSDGNTSNALPGPKSTT------------------------ 464

Query: 61  KVAGARPTTNSSESKVPRNGXXXXXXXXXXXXAKGTRRREAAAEYKYMAPHQASKATTDH 120
                   +NSSESKVPRNG             + T+  +AAAEYK+MAPHQ S+AT DH
Sbjct: 465 --------SNSSESKVPRNGDDDVFSDSDEEETRDTQSNKAAAEYKFMAPHQVSEATNDH 516

Query: 121 VGMLTHTTDKLSPQHAEHMKK---KESNTDK--RKHTSPNTTNMESAGASEIKAIAADVS 175
           VGMLT  +D+LS QH E  +    +ES TDK  + HT   +TNM S GAS+IKAIAAD S
Sbjct: 517 VGMLTQKSDQLSLQHEECKQNDASEESPTDKLHKNHTGNKSTNMGSVGASDIKAIAADAS 576

Query: 176 VFLSLYVDSNFESD 189
           VF   + D +F+SD
Sbjct: 577 VF--SFGDEDFDSD 588


>Glyma11g05610.1 
          Length = 562

 Score =  119 bits (299), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 92/189 (48%), Gaps = 59/189 (31%)

Query: 1   MVDYNGTLPTRTKANPASKGSDSSTSNVVAGARPTTNSSESKVPRNGXXXXXXXXXXXXA 60
           M+ YN  LP  TK+NPASKGSD +TSN + G + TT                        
Sbjct: 433 MIGYNAILPANTKSNPASKGSDGNTSNALPGLKHTT------------------------ 468

Query: 61  KVAGARPTTNSSESKVPRNGXXXXXXXXXXXXAKGTRRREAAAEYKYMAPHQASKATTDH 120
                   +NSSES+VPRNG             + T+  +AA EYK+MAPHQ S+ TTDH
Sbjct: 469 --------SNSSESEVPRNGDDDVFSDSDEEETRDTQSTKAATEYKFMAPHQVSETTTDH 520

Query: 121 VGMLTHTTDKLSPQHAEHMKKKESNTDKRKHTSPNTTNMESAGASEIKAIAADVSVFLSL 180
           VGMLTH TD+                           NM S GAS+IKAIAAD SVF   
Sbjct: 521 VGMLTHKTDQF-------------------------INMGSVGASDIKAIAADASVF--S 553

Query: 181 YVDSNFESD 189
           + D +FESD
Sbjct: 554 FGDEDFESD 562