Miyakogusa Predicted Gene
- Lj0g3v0125929.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0125929.1 tr|B9HHB6|B9HHB6_POPTR Predicted protein
OS=Populus trichocarpa GN=POPTRDRAFT_1083067 PE=4
SV=1,33.16,0.0000000004,seg,NULL,CUFF.7556.1
(571 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO028656 similar to UniRef100_A7PLG3 Cluster: Chromosom... 547 e-155
>gnl|LJGI|GO028656 similar to UniRef100_A7PLG3 Cluster: Chromosome chr7 scaffold_20,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_20, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 802
Score = 547 bits (276), Expect = e-155
Identities = 330/348 (94%)
Strand = Plus / Minus
Query: 184 gtagccggtgcaaggcctacaactaattcaagtgagagtaaggtccctagaaatggagat 243
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 508 gtagccggtgcaaggcctacaactaatgcaagtgagagtaaggtccctagaaatggagat 449
Query: 244 gatgatgtattctcggatagtgatgaagaggaagctaagggtacacgaaggagggaagct 303
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 448 gatgatgtattctcggatagtgatgaagaggaggctaagggtacacgaaggagggaaact 389
Query: 304 gcagctgagtacaaatatatggctcctcatcaagcatctaaagccactacagaccatgta 363
|||||||||||||||||||||||| |||||||||||||| | ||||||||||||||||||
Sbjct: 388 gcagctgagtacaaatatatggcttctcatcaagcatctgaggccactacagaccatgta 329
Query: 364 ggaatgttgacacacacaacagacaagttgtcaccccagcatgcagaacacatgaaaaag 423
|||||||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||
Sbjct: 328 ggaatgttgacacacacagcagaccagttgtcactccagcatgcggaacacatgaaaaat 269
Query: 424 aaagaatcaaacacagataaacgaaaacatacaagccccaacaccactaacatggaatct 483
||||||||||||||||||||| |||||||||| |||||| ||||| ||||||||||||
Sbjct: 268 gaagaatcaaacacagataaactaaaacatacaggccccagtaccacaaacatggaatct 209
Query: 484 gctggggccagtgaaatcaaggcaattgcagcagatgtttcagttttt 531
||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 208 gctggggccagtgaaatcaaggcaattgcagcagatgcttcagttttt 161
Score = 325 bits (164), Expect = 2e-88
Identities = 179/184 (97%)
Strand = Plus / Minus
Query: 1 atggtagactataatggcaccctacctacaaggacaaaagccaatcctgcaagcaaagga 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 atggtagactatactggcaccctacctacaaggacaaaagccaatcctgcaagcaaagga 533
Query: 61 tctgatagtagcacaagcaatgtcgtagccggtgcaaggcctacaactaattcaagtgag 120
|||||||||| ||| |||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 532 tctgatagtaacactagcaatgtcgtagccggtgcaaggcctacaactaatgcaagtgag 473
Query: 121 agtaaggtccctagaaatggagatgatgatgtattctcggatagtgatgaagaggaagct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 472 agtaaggtccctagaaatggagatgatgatgtattctcggatagtgatgaagaggaggct 413
Query: 181 aagg 184
||||
Sbjct: 412 aagg 409
Score = 119 bits (60), Expect = 2e-26
Identities = 67/68 (98%), Gaps = 1/68 (1%)
Strand = Plus / Minus
Query: 504 ggcaattgcagcagatgtttcagtttttctttccctttatgtagattcaaattttgagag 563
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 125 ggcaattgcagcagatgtttcagtttttctttcccttt-tgtagattcaaattttgagag 67
Query: 564 tgattgag 571
||||||||
Sbjct: 66 tgattgag 59