Miyakogusa Predicted Gene

Lj0g3v0124489.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124489.1 tr|Q9LMI5|Q9LMI5_ARATH At1g06340 OS=Arabidopsis
thaliana GN=T2D23.4 PE=2 SV=1,41.22,1e-18,Agenet,Agenet-like domain;
Tudor-like domain present in plant sequences,Tudor-like,
plant,NODE_64103_length_563_cov_49.799290.path2.1
         (146 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g43070.1                                                       141   2e-34
Glyma12g15170.1                                                       139   1e-33
Glyma20g22810.1                                                        90   9e-19
Glyma10g28670.1                                                        54   6e-08
Glyma11g27510.1                                                        52   2e-07
Glyma09g03740.1                                                        47   5e-06

>Glyma06g43070.1 
          Length = 142

 Score =  141 bits (355), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 69/142 (48%), Positives = 95/142 (66%), Gaps = 4/142 (2%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP++ V +   D+VE+ G E+GF  SYY+ATVVS L  G Y V+Y TL+ D+ ++ PL
Sbjct: 1   MRPPRKRVDFARDDKVEICGNEDGFLGSYYQATVVSRLDNGLYVVRYDTLLEDDASQQPL 60

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSST 120
            E +  K+LRP PP V ++ ++ LYQ V+ FDNDGWW G + G+      + Y VYFS+T
Sbjct: 61  TETLFPKELRPQPPRV-SKTDFALYQCVDAFDNDGWWLGQVTGK---KDAEHYYVYFSTT 116

Query: 121 NETLPYNCSRIRVHHEFFDAEW 142
           NE + Y+ S IRVHHE+   EW
Sbjct: 117 NEEIAYHVSAIRVHHEWSHGEW 138


>Glyma12g15170.1 
          Length = 142

 Score =  139 bits (350), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 72/142 (50%), Positives = 92/142 (64%), Gaps = 4/142 (2%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP++ V +  GD+VE+   EEGF  SYY ATVVS L  G Y V+Y TL+ D+ +  PL
Sbjct: 1   MRPPRKRVDFSRGDKVEICSNEEGFLGSYYPATVVSRLDNGLYVVRYDTLLEDDASFQPL 60

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSST 120
            E +  K+LRP PP V  R  + L+Q V+ FDNDGWW G I G+     G+ Y VYFS+T
Sbjct: 61  TETLFPKELRPHPPRV-PRTHFALHQCVDAFDNDGWWLGQITGK---KDGEHYYVYFSTT 116

Query: 121 NETLPYNCSRIRVHHEFFDAEW 142
           NE + Y+ S IRVHHE+   EW
Sbjct: 117 NEEIAYHVSGIRVHHEWSHGEW 138


>Glyma20g22810.1 
          Length = 323

 Score = 89.7 bits (221), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 75/133 (56%), Gaps = 4/133 (3%)

Query: 10  YKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDL 69
           +K G  VEV  +++GF  S++  TV+  L   R+ V+Y  L+ D++T   L+E +  + L
Sbjct: 22  FKPGTAVEVSSEDDGFRGSWFTGTVIRRLASERFLVEYDNLLADDKTTKKLREVLGLRHL 81

Query: 70  RPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCS 129
           RP+PP    R E+K    V+ F NDGWW G I   +     + + VYF  + E L ++  
Sbjct: 82  RPLPPTETDR-EFKFGDEVDAFHNDGWWEGHITQELE---NERFAVYFRVSKEQLVFSKE 137

Query: 130 RIRVHHEFFDAEW 142
           ++R+H E+ + +W
Sbjct: 138 QLRLHREWLNHDW 150



 Score = 87.0 bits (214), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 77/131 (58%), Gaps = 5/131 (3%)

Query: 12  VGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDLRP 71
           VG  VEV   E+GF  +++ ATVV  L   ++ V+Y  L+ D++++  L+E + A  +RP
Sbjct: 189 VGAIVEVSSDEDGFSGAWFAATVVEALGKDKFLVEYHDLLADDDSQ--LREEIDALHIRP 246

Query: 72  VPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCSRI 131
            P   +  G++ +   V+ F NDGWW G+I   ++ +    Y VYF S+NE L +  S++
Sbjct: 247 HPLDTDVDGQFSILDEVDAFYNDGWWVGVISKALADS---RYVVYFRSSNEELEFENSQL 303

Query: 132 RVHHEFFDAEW 142
           R+H ++   +W
Sbjct: 304 RLHQDWIGGKW 314


>Glyma10g28670.1 
          Length = 107

 Score = 53.9 bits (128), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 29/115 (25%)

Query: 28  SYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDLRPVPPLVNTRGEYKLYQA 87
           +++ ATVV ++   ++ V+Y              E +    +RP PP  +  G++ L   
Sbjct: 18  AWFAATVVKVVRKDKFLVEYH-------------EEIDVLHIRPHPPDADVDGQFSLLDE 64

Query: 88  VNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCSRIRVHHEFFDAEW 142
           ++ F NDGWW                 VYF S+NE L +  S++R+H ++   +W
Sbjct: 65  LDAFYNDGWWV----------------VYFRSSNEELEFEHSQLRLHQDWIGGKW 103


>Glyma11g27510.1 
          Length = 1253

 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/150 (26%), Positives = 71/150 (47%), Gaps = 19/150 (12%)

Query: 12  VGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDE-----ETKIPLKEAVLA 66
           V ++VEV   + GF  S++ ATV+      R+ V+Y  ++ D      E  + + EA+  
Sbjct: 21  VNEKVEVRSVDLGFLGSWHPATVIQCEKLKRH-VRYNNVLDDSGVNYLEEAVSVSEALDG 79

Query: 67  KD---------LRPVPPLVN-TRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVY 116
            +         +RP+PPLV   RG+ K    V+    + WW G+I     C G +  +V+
Sbjct: 80  DNECYSYSRGSIRPMPPLVEFERGDLKFGLCVDVNYEEAWWEGVIFDD-HCDGMEKRSVF 138

Query: 117 FSSTNETLPYNCSRIRVHHEFFD--AEWQQ 144
           F    + +     ++R+  ++ +   EW+Q
Sbjct: 139 FPDLGDEMQVGIHQLRITQDWHEVTGEWEQ 168


>Glyma09g03740.1 
          Length = 263

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 30/94 (31%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 10  YKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDL 69
           +K G   EV   ++G+   ++  TVV ++   R++V+Y+ L  +  T++ LKE + A+ +
Sbjct: 18  FKKGIVEEVSRDDKGYKGVWFLDTVVDIIGKDRFQVEYRDLKTNGGTQL-LKEEIDARLI 76

Query: 70  RPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG 103
           RP PP V+  G +K +Q V+       WY M  G
Sbjct: 77  RPCPPEVSFAGPFKQFQEVDA------WYKMTGG 104