Miyakogusa Predicted Gene

Lj0g3v0124489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0124489.1 tr|Q9LMI5|Q9LMI5_ARATH At1g06340 OS=Arabidopsis
thaliana GN=T2D23.4 PE=2 SV=1,41.22,1e-18,Agenet,Agenet-like domain;
Tudor-like domain present in plant sequences,Tudor-like,
plant,NODE_64103_length_563_cov_49.799290.path2.1
         (146 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079830.1 | agenet domain protein | HC | chr4:30897081-308...   140   4e-34
Medtr5g089220.1 | agenet domain protein | HC | chr5:38782448-387...   137   4e-33
Medtr5g089140.1 | agenet domain protein | HC | chr5:38743787-387...   136   6e-33
Medtr5g089250.1 | agenet domain protein | HC | chr5:38788620-387...   135   1e-32
Medtr3g065560.1 | agenet domain protein | LC | chr3:29626838-296...   124   3e-29
Medtr4g079980.1 | agenet domain protein | LC | chr4:30963203-309...   116   7e-27
Medtr4g127390.1 | agenet domain protein | LC | chr4:52866632-528...   103   4e-23
Medtr1g019680.1 | agenet domain protein | LC | chr1:5963796-5963...   103   5e-23
Medtr1g084210.1 | agenet domain protein | HC | chr1:37618390-376...    91   4e-19
Medtr2g033390.1 | plant tudor-like protein | LC | chr2:12683183-...    89   1e-18
Medtr2g011700.1 | hypothetical protein | LC | chr2:2914562-29150...    83   1e-16
Medtr3g058500.1 | bromo adjacent-like domain protein | HC | chr3...    53   1e-07
Medtr4g023710.1 | agenet domain protein | LC | chr4:8042523-8040...    47   5e-06
Medtr3g464550.1 | PHD zinc finger protein | HC | chr3:25940691-2...    47   5e-06

>Medtr4g079830.1 | agenet domain protein | HC |
           chr4:30897081-30897843 | 20130731
          Length = 147

 Score =  140 bits (353), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 73/144 (50%), Positives = 95/144 (65%), Gaps = 3/144 (2%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP R V YK+GD+VEV  KEEGF+ SYY+A VVS L  G+Y VQYK L++++++  PL
Sbjct: 1   MRPPMRRVDYKIGDKVEVCSKEEGFFGSYYKARVVSRLQNGQYMVQYKNLLLEDKSG-PL 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGR--ISCTGGKGYNVYFS 118
            E +   +LRP PP V    E++L Q V+ F NDGWW G I     I+   G  Y VYFS
Sbjct: 60  VETIYPYELRPTPPRVRNPHEFQLNQKVDAFHNDGWWVGQITSEKIITAEEGHCYWVYFS 119

Query: 119 STNETLPYNCSRIRVHHEFFDAEW 142
           +++ET  Y   +IRVHHE+F  EW
Sbjct: 120 TSSETNYYRYDQIRVHHEWFGGEW 143


>Medtr5g089220.1 | agenet domain protein | HC |
           chr5:38782448-38782888 | 20130731
          Length = 146

 Score =  137 bits (344), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 68/143 (47%), Positives = 95/143 (66%), Gaps = 2/143 (1%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP++ V YKVGD+VEV  ++EGF  SY+EAT+VS L  G+Y ++YK L+ D+E+++ L
Sbjct: 1   MRPPEKRVDYKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESEL-L 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSS 119
            E +  KDLRP+PP V    ++KL Q V+ FDNDGWW G I   +I       Y+VYF  
Sbjct: 60  METLFPKDLRPIPPHVRNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDY 119

Query: 120 TNETLPYNCSRIRVHHEFFDAEW 142
            ++T+ Y C +IRVH E    +W
Sbjct: 120 CHQTIYYPCDQIRVHQELVWGDW 142


>Medtr5g089140.1 | agenet domain protein | HC |
           chr5:38743787-38743347 | 20130731
          Length = 146

 Score =  136 bits (343), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 93/143 (65%), Gaps = 2/143 (1%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP + V YKVGD+VEV  KEEGF  SY+EAT+VS L  G+Y ++YK L+ D+E+++ L
Sbjct: 1   MRPPVKRVDYKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESEL-L 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSS 119
            E +  KDLRP+PP V     ++L Q V+ FDNDGWW G I   +I       Y+VYF  
Sbjct: 60  METLFPKDLRPLPPRVRNPSRFELNQKVDVFDNDGWWVGKIASEKILMEKSYYYSVYFDY 119

Query: 120 TNETLPYNCSRIRVHHEFFDAEW 142
            ++T+ Y C +IRVH E    +W
Sbjct: 120 CHQTIYYPCDQIRVHQELVWGDW 142


>Medtr5g089250.1 | agenet domain protein | HC |
           chr5:38788620-38789060 | 20130731
          Length = 146

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 69/143 (48%), Positives = 94/143 (65%), Gaps = 2/143 (1%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP + V YKVGD+VEV  KEEGF  SY+EAT+VS L  G+Y ++YK L+ D+E+++ L
Sbjct: 1   MRPPVKRVDYKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESEL-L 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSS 119
            E +  KDLRP+PP V+    ++L Q V+ FDNDGWW G I   +I       Y+VYF  
Sbjct: 60  METLFPKDLRPLPPRVHNPWRFELNQKVDVFDNDGWWVGEIASEKILMEKSYYYSVYFDY 119

Query: 120 TNETLPYNCSRIRVHHEFFDAEW 142
            ++T+ Y C +IRVH E    +W
Sbjct: 120 CHQTIYYPCDQIRVHQELVWGDW 142


>Medtr3g065560.1 | agenet domain protein | LC |
           chr3:29626838-29627278 | 20130731
          Length = 146

 Score =  124 bits (311), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/143 (45%), Positives = 88/143 (61%), Gaps = 2/143 (1%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP R V Y+VGD VEV  K+EGF+ SY+EA +V+ L  G Y V+YK L+ ++E+  PL
Sbjct: 1   MRPPMRIVNYRVGDLVEVCIKDEGFWGSYFEAKIVACLENGEYVVRYKNLLENDESG-PL 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYN-VYFSS 119
           +E +L+KDLRP+PP V     ++L Q V+ F NDGWW G I  +        Y  VYF +
Sbjct: 60  EETLLSKDLRPIPPSVQNPSAFQLNQKVDVFCNDGWWLGKITSKKVFRRNHYYIWVYFPT 119

Query: 120 TNETLPYNCSRIRVHHEFFDAEW 142
            +      C +IRVHHE    +W
Sbjct: 120 ISIRRLCRCDQIRVHHELSGGDW 142


>Medtr4g079980.1 | agenet domain protein | LC |
           chr4:30963203-30962742 | 20130731
          Length = 153

 Score =  116 bits (291), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 61/127 (48%), Positives = 84/127 (66%), Gaps = 2/127 (1%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP + V YKVGD+VEV  KEEGF  SY+EAT+VS L  G+Y ++YK L+ D+E+++ L
Sbjct: 1   MRPPMKRVDYKVGDKVEVCSKEEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESQL-L 59

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSS 119
            E +L+KDLRP  P V    +++L Q V+ F  DGWW G I   +I       Y+VYF  
Sbjct: 60  METLLSKDLRPSQPRVRNPSKFQLNQKVDVFYKDGWWVGKIASEKILMENNYYYSVYFDY 119

Query: 120 TNETLPY 126
           T++T+ Y
Sbjct: 120 THQTIYY 126


>Medtr4g127390.1 | agenet domain protein | LC |
           chr4:52866632-52867072 | 20130731
          Length = 146

 Score =  103 bits (258), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 81/136 (59%), Gaps = 2/136 (1%)

Query: 8   VVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAK 67
           V Y+V   VEV  K+EGF+ SY++A +V  L  G+Y V+YK L+ +E+   PL+E +L+K
Sbjct: 8   VNYQVRVLVEVCIKDEGFWGSYFKAKIVVCLENGKYVVRYKDLL-EEDKFGPLEETLLSK 66

Query: 68  DLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSSTNETLPY 126
           DLRP+PP V    +++L Q V+ F  DGWW G I+G +         +VYF +       
Sbjct: 67  DLRPMPPCVQNPPKFQLNQKVDVFCKDGWWLGKIIGKKEFRKKKYKISVYFPTIPRKRLC 126

Query: 127 NCSRIRVHHEFFDAEW 142
            C +IRVHHE    EW
Sbjct: 127 CCDQIRVHHELSGGEW 142


>Medtr1g019680.1 | agenet domain protein | LC | chr1:5963796-5963376
           | 20130731
          Length = 123

 Score =  103 bits (257), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 60/136 (44%), Positives = 75/136 (55%), Gaps = 18/136 (13%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           M    +   YK GD+VEV  KEEGF  SY+EAT+VS L      +Q+             
Sbjct: 1   MSSTMKRRSYKYGDKVEVCSKEEGFVGSYFEATIVSCL------LQWTIF---------- 44

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG-RISCTGGKGYNVYFSS 119
            E V   +LRP+PP V +  E++L Q V+ FDNDGWW G I   +I    G  Y VYF +
Sbjct: 45  -ETVHPYELRPLPPRVRSPREFQLNQKVDAFDNDGWWLGQITSEKIITEEGHYYKVYFDT 103

Query: 120 TNETLPYNCSRIRVHH 135
           T ET+ Y C RIRVHH
Sbjct: 104 TYETICYPCDRIRVHH 119


>Medtr1g084210.1 | agenet domain protein | HC |
           chr1:37618390-37617540 | 20130731
          Length = 199

 Score = 90.9 bits (224), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)

Query: 10  YKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDL 69
           + VG  VEV   E+G   +++  T+V L    R+ V+Y+ LI D+++K PL+E +  + +
Sbjct: 56  FVVGALVEVCSDEKGLKGAWFLGTIVELKRHFRFVVEYEALI-DDDSK-PLREELNIRHI 113

Query: 70  RPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCS 129
           RP PP  +   E+K +  V+ F NDGWW G++       G   Y V+F S  E + ++ S
Sbjct: 114 RPRPPKTDDVAEFKFFDEVDAFHNDGWWVGIVT---KVVGDSKYVVFFRSFKEEMEFHHS 170

Query: 130 RIRVHHEFFDAEW 142
           ++R+H ++ D  W
Sbjct: 171 QLRLHQDWMDRRW 183


>Medtr2g033390.1 | plant tudor-like protein | LC |
           chr2:12683183-12686425 | 20130731
          Length = 471

 Score = 89.4 bits (220), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 50/130 (38%), Positives = 71/130 (54%), Gaps = 1/130 (0%)

Query: 13  GDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDLRPV 72
           G  VEV   E+G+  S+Y ATVV L   G+Y V+Y TL  D+ T+  LKE V   D+RP 
Sbjct: 258 GTNVEVKSDEQGYEGSWYPATVVDLYQNGKYLVEYSTLKTDDLTQ-QLKEVVDVSDIRPR 316

Query: 73  PPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCSRIR 132
           PP ++    Y   + V+ + NDGWW G++        G  Y VYF ++NE L +  + +R
Sbjct: 317 PPDIDHFCRYVRQEWVDAWYNDGWWEGVVSNVGHGLNGFKYQVYFWTSNEVLEFEHNHLR 376

Query: 133 VHHEFFDAEW 142
            H  + D  W
Sbjct: 377 PHQYWIDGRW 386



 Score = 81.6 bits (200), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/139 (31%), Positives = 79/139 (56%), Gaps = 4/139 (2%)

Query: 4   PQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEA 63
           P+    ++ G+ VEV   EEG+  +++ AT++  L   ++ V+++ L++++     LKE 
Sbjct: 61  PKNEPKFRKGEIVEVSSDEEGYQGAWFVATIIDTLGNEKFLVEHRDLLMNDGGIEVLKEE 120

Query: 64  VLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNET 123
           +  K +RP PP V   G +K  Q V+ + NDGWW GM+V  ++    +   V F + NE 
Sbjct: 121 IETKFIRPCPPHVPMFGSFKRLQEVDAWYNDGWWEGMVVELVNS---EECYVRFRN-NEV 176

Query: 124 LPYNCSRIRVHHEFFDAEW 142
           L +  S++R H ++ D +W
Sbjct: 177 LKFESSKLRPHQDWIDGKW 195


>Medtr2g011700.1 | hypothetical protein | LC | chr2:2914562-2915028
           | 20130731
          Length = 140

 Score = 82.8 bits (203), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 46/103 (44%), Positives = 59/103 (57%), Gaps = 15/103 (14%)

Query: 1   MRPPQRTVVYKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPL 60
           MRPP + V YKVGD+VEV  KE+G                G+Y V+YK L+ D+E+++ L
Sbjct: 1   MRPPTKRVDYKVGDKVEVCSKEDGL--------------VGKYTVRYKNLLKDDESEL-L 45

Query: 61  KEAVLAKDLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVG 103
            E +  KDL  VPP V    ++KL Q V  FDNDGWW G I  
Sbjct: 46  TEILFLKDLCLVPPRVRRPSKFKLNQKVYVFDNDGWWIGEITS 88


>Medtr3g058500.1 | bromo adjacent-like domain protein | HC |
           chr3:23246301-23250734 | 20130731
          Length = 662

 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 19/152 (12%)

Query: 10  YKVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAV----L 65
           YKV D++EV+ ++ G    ++  T+V +    + +VQY   + DE+    L+E +    L
Sbjct: 384 YKVDDKIEVLSQDSGIRGCWFRCTIVQV-ARKQLKVQYDD-VQDEDGSGNLEEWIPAFKL 441

Query: 66  AK------------DLRPVPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGY 113
           AK             +RP PPL       ++  AV+ + +DGWW G+I    +C G    
Sbjct: 442 AKPDKLEMRQPGRSTIRPAPPLEEQELIVEVGTAVDAWWSDGWWEGVITTIDNC-GDDNV 500

Query: 114 NVYFSSTNETLPYNCSRIRVHHEFFDAEWQQI 145
            VYF   +  +  +   +R+  ++    W  I
Sbjct: 501 QVYFPGESLQMTVHKKDLRISRDWLGGTWVNI 532


>Medtr4g023710.1 | agenet domain protein | LC | chr4:8042523-8040576
           | 20130731
          Length = 490

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 36/131 (27%), Positives = 59/131 (45%), Gaps = 12/131 (9%)

Query: 13  GDEVEV-IGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEETKIPLKEAVLAKDLRP 71
           G++VEV I    G Y S++ AT+V  +   +  V+Y  + V   T       V    LRP
Sbjct: 10  GNKVEVSIDHGIGIYCSWFTATIVKWVSSDKLLVEYDDVDVKPTT-------VGLHQLRP 62

Query: 72  VPPLVNTRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVYFSSTNETLPYNCSRI 131
           VP   +   E K+   V  F    WW G ++  +   G   + V F+ + E + +    +
Sbjct: 63  VPTPESDDWEVKIGDKVEAFRKQRWWEGRVIEDL---GNGSFRVCFTDSEEIV-FPKDLL 118

Query: 132 RVHHEFFDAEW 142
           RVH ++ +  W
Sbjct: 119 RVHRQWINHNW 129


>Medtr3g464550.1 | PHD zinc finger protein | HC |
           chr3:25940691-25947645 | 20130731
          Length = 1123

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Composition-based stats.
 Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 17/141 (12%)

Query: 11  KVGDEVEVIGKEEGFYTSYYEATVVSLLPFGRYEVQYKTLIVDEE----TKIPLKEAVLA 66
           K+ + VEV   EEGF  S++  TV+      R+ VQY+ ++ D       +I    +VL 
Sbjct: 15  KINERVEVKSFEEGFLGSWHPGTVIDSEKLKRH-VQYENILNDNGLGNFVEIVSVSSVLD 73

Query: 67  KD---------LRPVPPLVN-TRGEYKLYQAVNTFDNDGWWYGMIVGRISCTGGKGYNVY 116
            D         +RPVPPLV   + + K    V+    + WW G++  +  C G +   V+
Sbjct: 74  GDIGSLSKRGRIRPVPPLVEFEKCDLKYGLCVDVNYQEAWWEGVVNDK--CDGMEERTVF 131

Query: 117 FSSTNETLPYNCSRIRVHHEF 137
           F    + +      +R+  ++
Sbjct: 132 FPDLGDEMKVGIQEMRITQDW 152