Miyakogusa Predicted Gene
- Lj0g3v0113389.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0113389.1 tr|F4IR57|F4IR57_ARATH RAB GTPase activator
protein OS=Arabidopsis thaliana GN=At2g43490 PE=4
SV=1,44.21,0.00000000000002,Ypt/Rab-GAP domain of gyp1p,Rab-GTPase-TBC
domain; TBC_RABGAP,Rab-GTPase-TBC domain; RabGAP-TBC,Rab-,CUFF.6616.1
(442 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 748 0.0
Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 647 0.0
Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 476 e-134
Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protei... 476 e-134
Medtr2g099185.1 | Rab GTPase activator | HC | chr2:42550462-4254... 169 5e-42
Medtr2g099185.3 | Rab GTPase activator | HC | chr2:42550766-4254... 157 2e-38
Medtr2g099185.2 | Rab GTPase activator | HC | chr2:42550462-4254... 157 2e-38
Medtr4g115090.1 | RabGAP/TBC domain protein | HC | chr4:47487726... 137 2e-32
Medtr3g092100.1 | Rab GTPase activator | HC | chr3:42056500-4205... 106 5e-23
Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327... 103 3e-22
Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409... 103 4e-22
Medtr1g072400.1 | Rab-GTPase-TBC domain protein | LC | chr1:3213... 88 1e-17
Medtr3g083840.1 | RabGAP/TBC domain protein | HC | chr3:37824348... 78 2e-14
Medtr8g085300.1 | RabGAP/TBC domain protein | HC | chr8:35334451... 76 6e-14
Medtr5g065510.1 | GTPase-activating gyp7-like protein, putative ... 68 2e-11
Medtr4g114580.1 | RabGAP/TBC domain protein | HC | chr4:47118501... 59 8e-09
Medtr4g079330.1 | Rab-GTPase-TBC domain protein | LC | chr4:3064... 54 2e-07
>Medtr2g083220.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr2:34944012-34938150 | 20130731
Length = 443
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/430 (81%), Positives = 388/430 (90%), Gaps = 1/430 (0%)
Query: 1 MWRDPGVPADSFYEIRPECT-DVPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKTLRRI 59
MWRDPGV ADSFYE RP+C+ DVPISRFKIKAGKTLS RKWH AFT EGYLDIGKTLRRI
Sbjct: 1 MWRDPGVSADSFYETRPDCSNDVPISRFKIKAGKTLSPRKWHDAFTQEGYLDIGKTLRRI 60
Query: 60 YRGGVHPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRF 119
YRGGVHPSIRGEVWEFLLGCYDPKSTF+ERDQIR+RRR+QYATWK+ECRQLFPLVGSGRF
Sbjct: 61 YRGGVHPSIRGEVWEFLLGCYDPKSTFDERDQIRERRRIQYATWKKECRQLFPLVGSGRF 120
Query: 120 ITAPVISEDGQPIQEPLVLSETNSAEGLAVLPQDNNWPSSLNAASNVETVADKRVVQWLL 179
IT+PVI++DGQPIQ+P+++ E N A+GLAVL QDNN PSS+++ +N+E V DK+++QW+L
Sbjct: 121 ITSPVITDDGQPIQDPMIMPEGNQAKGLAVLLQDNNRPSSIDSVNNLENVTDKKLIQWML 180
Query: 180 TLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLD 239
TLHQIGLDVVRTDRTLVFYEKQENL+KLWD+LA+YAWIDK+VGYGQGMSDLCSPMIILLD
Sbjct: 181 TLHQIGLDVVRTDRTLVFYEKQENLSKLWDILAVYAWIDKEVGYGQGMSDLCSPMIILLD 240
Query: 240 DEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXX 299
DEADAFWCFERLMRRLRGNFRCT ++GVEAQLSNLASITQVIDPK
Sbjct: 241 DEADAFWCFERLMRRLRGNFRCTGRTLGVEAQLSNLASITQVIDPKLHKHIEHIGGGDYV 300
Query: 300 FAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEEPQSATKKTEGPKGKAKSIH 359
FAFRMLMVLFRREFSFCDSL+LWEMMWALEYDP LFLMYEE QSA+ K EG KGKAKSI
Sbjct: 301 FAFRMLMVLFRREFSFCDSLYLWEMMWALEYDPYLFLMYEEAQSASVKAEGVKGKAKSIR 360
Query: 360 QCGKYERANMRNGTKNSEAPLPISIFLAASVLKDKSAELLHEARGLDDVVKILNDTTGNL 419
QCGKYER NMRNG KN+E+PLPIS+FL A VLKDKS +LLHEARGLDDVVKILNDTTGNL
Sbjct: 361 QCGKYERQNMRNGAKNAESPLPISVFLVAGVLKDKSTKLLHEARGLDDVVKILNDTTGNL 420
Query: 420 DAKKACSGAM 429
DAKKAC+ AM
Sbjct: 421 DAKKACNEAM 430
>Medtr4g081110.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr4:31396490-31401093 | 20130731
Length = 436
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/430 (74%), Positives = 362/430 (84%), Gaps = 7/430 (1%)
Query: 1 MWRDPGVPADSFYEIRPECTDVPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKTLRRIY 60
MWRDPGVPADSFYE RPECTDVP SRF+IKAGKTLS R+W AAF+ EGYLDIG+TL RI+
Sbjct: 1 MWRDPGVPADSFYETRPECTDVPKSRFRIKAGKTLSERRWRAAFSPEGYLDIGRTLSRIH 60
Query: 61 RGGVHPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRFI 120
RGG+HPSIRGEVWEFLLGCY+P STFEER++IRQRRR QYA WKEECRQLFPLVGSGRFI
Sbjct: 61 RGGIHPSIRGEVWEFLLGCYEPTSTFEEREEIRQRRRTQYAEWKEECRQLFPLVGSGRFI 120
Query: 121 TAPVISEDGQPIQEPLVLSETNSAEGLAVLPQDNNWPSSLNAASNVETVADKRVVQWLLT 180
TAPV+++DG P+Q+PLVL E N G+ V PQ+ PS N A + V DK+V+QW+LT
Sbjct: 121 TAPVVTDDGVPVQDPLVLLENNPENGVIVPPQEVGAPSPNNTA---KKVTDKKVIQWMLT 177
Query: 181 LHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDD 240
LHQIGLDV+RTDRTLVFYEK+ENL+KLWD+LA+YA ID DVGYGQGMSDLCSPMIILLDD
Sbjct: 178 LHQIGLDVIRTDRTLVFYEKKENLSKLWDILAVYARIDNDVGYGQGMSDLCSPMIILLDD 237
Query: 241 EADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXXF 300
EAD+FWCFERLMRRLRGNFRCTNNSVGVE QL+NLASITQVIDPK F
Sbjct: 238 EADSFWCFERLMRRLRGNFRCTNNSVGVETQLNNLASITQVIDPKLHQHIEHIGGGDYLF 297
Query: 301 AFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEEPQSATKKTEGPKGKAKSIHQ 360
AFRMLMVLFRREFSFCDSL+LWEMMWALEYDP++F MYE+ + +++ K + KSI
Sbjct: 298 AFRMLMVLFRREFSFCDSLYLWEMMWALEYDPNMFWMYEDSEETAEES---KARLKSIRH 354
Query: 361 CGKYERANMRNGTKNS-EAPLPISIFLAASVLKDKSAELLHEARGLDDVVKILNDTTGNL 419
GK+ER NMRNG KN+ E PLPISIFL ASVLK+KSA LL +ARGLDDVVKILNDT GNL
Sbjct: 355 YGKFERENMRNGAKNTEEPPLPISIFLVASVLKEKSATLLQQARGLDDVVKILNDTNGNL 414
Query: 420 DAKKACSGAM 429
DAKKAC A+
Sbjct: 415 DAKKACMAAL 424
>Medtr1g069705.2 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360034-30352916 | 20130731
Length = 424
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 296/430 (68%), Gaps = 31/430 (7%)
Query: 1 MWRDPGVPADSFYEIRPEC-TDVPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKTLRRI 59
M R + FY IRPEC DVP +RFK ++GKTLSAR+W++AF EG LDI K LRRI
Sbjct: 12 MKRSGTTELNDFYPIRPECKADVPTTRFKPRSGKTLSARRWNSAFNEEGRLDIAKVLRRI 71
Query: 60 YRGGVHPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRF 119
RGGVHPSI+GEVWEFLLGCYDP ST EER++I+QRRR QY WK EC+++ P++GSG+F
Sbjct: 72 QRGGVHPSIKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWKAECQKIVPVLGSGKF 131
Query: 120 ITAPVISEDGQPIQEPLVLSETNSAEGLAVLPQDNNWPSSLNAASNVETVADKRVVQWLL 179
+T P++ +DGQPI LV +T +DK+VVQWL
Sbjct: 132 VTTPLVGDDGQPIDPSLVKIKT----------------------------SDKKVVQWLQ 163
Query: 180 TLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLD 239
LHQIGLDVVRTDR L FYE + N +KLWDVL++YAW+D D+GY QGM+D+CSP++IL++
Sbjct: 164 LLHQIGLDVVRTDRALAFYEIEANQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIE 223
Query: 240 DEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXX 299
+EAD FWCF+R MRR+R NFR T S+GV+ QL L+ I + +DPK
Sbjct: 224 NEADCFWCFDRAMRRMRENFRVTATSMGVQTQLGTLSQIMKTVDPKLHHHLEDLDGGEYL 283
Query: 300 FAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEEPQSATKKTEGPKGKAKSIH 359
FAFRMLMVLFRREFSF D+L+LWE+MW +EY+P++F YE+P+ A K K +
Sbjct: 284 FAFRMLMVLFRREFSFADTLYLWELMWGMEYNPNIFTKYEDPEGAKTKAPTTAVNNKVLQ 343
Query: 360 QCGKYERANMRNGTKNSEAPLPISIFLAASVLKDKSAELLHEARGLDDVVKILNDTTGNL 419
Q GK+ER ++ G +E ++IFL ASVL+ K+ +L EA+G+DDVVKIL D T +L
Sbjct: 344 QYGKFERKIVKTG--RTEECSALAIFLVASVLETKNKRILTEAKGVDDVVKILGDITSSL 401
Query: 420 DAKKACSGAM 429
DAKKAC A+
Sbjct: 402 DAKKACKEAL 411
>Medtr1g069705.1 | Ypt/Rab-GAP domain of gyp1p superfamily protein |
HC | chr1:30360021-30352911 | 20130731
Length = 424
Score = 476 bits (1225), Expect = e-134, Method: Compositional matrix adjust.
Identities = 229/430 (53%), Positives = 296/430 (68%), Gaps = 31/430 (7%)
Query: 1 MWRDPGVPADSFYEIRPEC-TDVPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKTLRRI 59
M R + FY IRPEC DVP +RFK ++GKTLSAR+W++AF EG LDI K LRRI
Sbjct: 12 MKRSGTTELNDFYPIRPECKADVPTTRFKPRSGKTLSARRWNSAFNEEGRLDIAKVLRRI 71
Query: 60 YRGGVHPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRF 119
RGGVHPSI+GEVWEFLLGCYDP ST EER++I+QRRR QY WK EC+++ P++GSG+F
Sbjct: 72 QRGGVHPSIKGEVWEFLLGCYDPNSTSEERNEIKQRRRGQYDMWKAECQKIVPVLGSGKF 131
Query: 120 ITAPVISEDGQPIQEPLVLSETNSAEGLAVLPQDNNWPSSLNAASNVETVADKRVVQWLL 179
+T P++ +DGQPI LV +T +DK+VVQWL
Sbjct: 132 VTTPLVGDDGQPIDPSLVKIKT----------------------------SDKKVVQWLQ 163
Query: 180 TLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLD 239
LHQIGLDVVRTDR L FYE + N +KLWDVL++YAW+D D+GY QGM+D+CSP++IL++
Sbjct: 164 LLHQIGLDVVRTDRALAFYEIEANQSKLWDVLSIYAWLDNDIGYVQGMNDICSPLVILIE 223
Query: 240 DEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXX 299
+EAD FWCF+R MRR+R NFR T S+GV+ QL L+ I + +DPK
Sbjct: 224 NEADCFWCFDRAMRRMRENFRVTATSMGVQTQLGTLSQIMKTVDPKLHHHLEDLDGGEYL 283
Query: 300 FAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDLFLMYEEPQSATKKTEGPKGKAKSIH 359
FAFRMLMVLFRREFSF D+L+LWE+MW +EY+P++F YE+P+ A K K +
Sbjct: 284 FAFRMLMVLFRREFSFADTLYLWELMWGMEYNPNIFTKYEDPEGAKTKAPTTAVNNKVLQ 343
Query: 360 QCGKYERANMRNGTKNSEAPLPISIFLAASVLKDKSAELLHEARGLDDVVKILNDTTGNL 419
Q GK+ER ++ G +E ++IFL ASVL+ K+ +L EA+G+DDVVKIL D T +L
Sbjct: 344 QYGKFERKIVKTG--RTEECSALAIFLVASVLETKNKRILTEAKGVDDVVKILGDITSSL 401
Query: 420 DAKKACSGAM 429
DAKKAC A+
Sbjct: 402 DAKKACKEAL 411
>Medtr2g099185.1 | Rab GTPase activator | HC |
chr2:42550462-42544781 | 20130731
Length = 671
Score = 169 bits (428), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 81/163 (49%), Positives = 108/163 (66%), Gaps = 1/163 (0%)
Query: 169 VADKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMS 228
++ RV +WL TLH+I +DVVRTD L FYE + NLA++ D+LA+YAW+D GY QGMS
Sbjct: 355 ASEDRVSEWLWTLHRIVVDVVRTDNHLEFYEDRRNLARMSDILAVYAWVDPATGYCQGMS 414
Query: 229 DLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXX 288
DL SP +++ +D ADAFWCFE L+RR+R NF+ V QL L I ++ D +
Sbjct: 415 DLLSPFVVIFEDNADAFWCFEMLLRRMRENFK-MEGPTRVMKQLRALWHILELSDKELFA 473
Query: 289 XXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEMMWALEYD 331
FAFRML+VLFRRE SF ++L +WEMMWA ++D
Sbjct: 474 HLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEMMWAADFD 516
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 29 IKAGKTLSARKWHAAFTTEGYLD-IGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFE 87
+ + L W A +EG + K L+ + GGV PSIR EVWEFLLGCY ST E
Sbjct: 37 VTVNRMLKPDIWQALSDSEGKVSGFRKALKLVVLGGVDPSIRPEVWEFLLGCYALSSTAE 96
Query: 88 ERDQIRQRRRMQYATWKEECRQLFPLVGSG 117
R ++R RR Y ++C+ + VG+G
Sbjct: 97 YRKRLRAARRELYRDLVKQCQAMHSSVGTG 126
>Medtr2g099185.3 | Rab GTPase activator | HC |
chr2:42550766-42545779 | 20130731
Length = 530
Score = 157 bits (398), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 169 VADKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMS 228
++ RV +WL TLH+I +DVVRTD L FYE + NLA++ D+LA+YAW+D GY QGMS
Sbjct: 360 ASEDRVSEWLWTLHRIVVDVVRTDNHLEFYEDRRNLARMSDILAVYAWVDPATGYCQGMS 419
Query: 229 DLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXX 288
DL SP +++ +D ADAFWCFE L+RR+R NF+ V QL L I ++ D +
Sbjct: 420 DLLSPFVVIFEDNADAFWCFEMLLRRMRENFK-MEGPTRVMKQLRALWHILELSDKELFA 478
Query: 289 XXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDL 334
FAFRML+VLFRRE SF ++L +WE+ A P L
Sbjct: 479 HLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEVRAACFQRPPL 524
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 56/105 (53%), Gaps = 5/105 (4%)
Query: 14 EIRPECTDVPISRFKIKAGKTLSARKWHAAFTTEGYLD-IGKTLRRIYRGGVHPSIRGEV 72
+IR C +S +K + L W A +EG + K L+ + GGV PSIR EV
Sbjct: 31 DIREPC----LSHSPVKVNRMLKPDIWQALSDSEGKVSGFRKALKLVVLGGVDPSIRPEV 86
Query: 73 WEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSG 117
WEFLLGCY ST E R ++R RR Y ++C+ + VG+G
Sbjct: 87 WEFLLGCYALSSTAEYRKRLRAARRELYRDLVKQCQAMHSSVGTG 131
>Medtr2g099185.2 | Rab GTPase activator | HC |
chr2:42550462-42545186 | 20130731
Length = 525
Score = 157 bits (397), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/166 (47%), Positives = 105/166 (63%), Gaps = 1/166 (0%)
Query: 169 VADKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQENLAKLWDVLALYAWIDKDVGYGQGMS 228
++ RV +WL TLH+I +DVVRTD L FYE + NLA++ D+LA+YAW+D GY QGMS
Sbjct: 355 ASEDRVSEWLWTLHRIVVDVVRTDNHLEFYEDRRNLARMSDILAVYAWVDPATGYCQGMS 414
Query: 229 DLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQLSNLASITQVIDPKXXX 288
DL SP +++ +D ADAFWCFE L+RR+R NF+ V QL L I ++ D +
Sbjct: 415 DLLSPFVVIFEDNADAFWCFEMLLRRMRENFK-MEGPTRVMKQLRALWHILELSDKELFA 473
Query: 289 XXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEMMWALEYDPDL 334
FAFRML+VLFRRE SF ++L +WE+ A P L
Sbjct: 474 HLSKIGAESLHFAFRMLLVLFRRELSFNEALSMWEVRAACFQRPPL 519
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 29 IKAGKTLSARKWHAAFTTEGYLD-IGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFE 87
+ + L W A +EG + K L+ + GGV PSIR EVWEFLLGCY ST E
Sbjct: 37 VTVNRMLKPDIWQALSDSEGKVSGFRKALKLVVLGGVDPSIRPEVWEFLLGCYALSSTAE 96
Query: 88 ERDQIRQRRRMQYATWKEECRQLFPLVGSG 117
R ++R RR Y ++C+ + VG+G
Sbjct: 97 YRKRLRAARRELYRDLVKQCQAMHSSVGTG 126
>Medtr4g115090.1 | RabGAP/TBC domain protein | HC |
chr4:47487726-47477753 | 20130731
Length = 666
Score = 137 bits (345), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 139/296 (46%), Gaps = 61/296 (20%)
Query: 35 LSARKWHAAFTTEGYLDIGKTLR-RIYRGGVHPSIRGEVWEFLLGCYDPKSTFEERDQIR 93
L +++W +EG + + LR RI+ GG+ +R EVW LLG Y ST+ ER+ ++
Sbjct: 337 LGSKEWITFVDSEGRVIDSEALRKRIFYGGLDHELRNEVWGLLLGYYPYDSTYAEREFLK 396
Query: 94 QRRRMQYATWKEECRQLFPLVGSGRFITAPVISEDGQPIQEPLVLSETNSAEGLAVLPQD 153
++ +Y T K
Sbjct: 397 SVKKSEYETIK------------------------------------------------- 407
Query: 154 NNWPSSLNAASNVETVADKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQEN--LAKLWDVL 211
N W S + + KR ++ I DVVRTDR+L FYE +N + L D+L
Sbjct: 408 NQWQS-------ISSAQAKRFTKFRERKGLIEKDVVRTDRSLTFYEGDDNPNVNVLRDIL 460
Query: 212 ALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNNSVGVEAQ 271
Y++ + D+GY QGMSDL SP++ +++DE++AFWCF LM RL NF N G+ +Q
Sbjct: 461 LTYSFYNFDLGYCQGMSDLLSPILFVMEDESEAFWCFVSLMERLGPNFNRDQN--GMHSQ 518
Query: 272 LSNLASITQVIDPKXXXXXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEMMWA 327
L L+ + +++D F FR +++ F+REF + ++ LWE++W
Sbjct: 519 LFALSKLVELLDSPLHNYFKQRDCLNYFFCFRWILIQFKREFEYEKTMRLWEVLWT 574
>Medtr3g092100.1 | Rab GTPase activator | HC |
chr3:42056500-42051571 | 20130731
Length = 551
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 111/226 (49%), Gaps = 30/226 (13%)
Query: 203 NLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCT 262
+ A+L +L YA D ++GY QGMSDL SP+I ++ ++ +AFWCF M++ R NFR
Sbjct: 338 HAARLVAILEAYALYDPEIGYCQGMSDLLSPIICVVSEDHEAFWCFVGFMKKARQNFRL- 396
Query: 263 NNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLW 322
+ VG+ QL +A I + D F +RM++VLFRRE +F +L LW
Sbjct: 397 -DEVGIRRQLDIVAKIIKFKDSHLFRHLEKLQAEDCFFVYRMVVVLFRRELTFEQTLCLW 455
Query: 323 EMMWALEYDPDLFLMYEEPQSATKKTEGPKGKAKSIHQCGKYERANMRNGTKNSEAPLPI 382
E+MWA Q+A + GK + +R ++ L
Sbjct: 456 EVMWA-------------DQAAIRAG------------IGKSPWSRIRQRAPPTDDLLLF 490
Query: 383 SIFLAASVLKDKSAELLHEARGLDDVVKILNDTTGNLDAKKACSGA 428
+I AASVL+ + +L + +DD++K N G+LD K A
Sbjct: 491 AI--AASVLQRRKL-ILEKYSSMDDILKECNGMAGHLDVWKLLDDA 533
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/151 (39%), Positives = 84/151 (55%), Gaps = 21/151 (13%)
Query: 23 PISRFKIKAGKTLSARKWHAAFTTEGYL-DIG-KTLRRIYRGGVHPSIRGEVWEFLLGCY 80
P SR K K + LS ++W + F +G + D G K L+R+ GGV PSIR EVW FLLG Y
Sbjct: 61 PWSRRKRK--RVLSPQQWKSLFAPDGRIRDRGMKFLKRVRSGGVDPSIRAEVWPFLLGVY 118
Query: 81 DPKSTFEERDQIRQRRRMQYATWKEECRQLFPL-VGSGRFITAPVISEDGQPIQEPLVLS 139
D +T EERD IR + R +Y + +CRQL GS + I I+ +G
Sbjct: 119 DLDTTKEERDVIRTQNRKKYEKLRRQCRQLLKSNSGSFKLIEIGEINYEG---------- 168
Query: 140 ETNSAEGLAVLPQDNNWPSSLNAASNVETVA 170
+G++ + QD+ PSS +AAS E+++
Sbjct: 169 -----DGVSFI-QDSGSPSSEDAASARESLS 193
>Medtr1g007590.1 | Rab GTPase activator | HC | chr1:448550-444327 |
20130731
Length = 591
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 205 AKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNN 264
A+L +L YA D ++GY QGMSDL SP++ ++ ++ +AFWCF M++ R NFR +
Sbjct: 385 ARLVAILEAYALYDSEIGYCQGMSDLLSPIVSIISEDHEAFWCFVGFMKKARQNFRL--D 442
Query: 265 SVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEM 324
VG+ QL +A I + D F +RM++VLFRRE +F ++ LWE+
Sbjct: 443 EVGIRRQLELVAKIIKYKDGHLFKHLEKLQAEDCFFVYRMVVVLFRRELTFEQTICLWEV 502
Query: 325 MWA 327
MWA
Sbjct: 503 MWA 505
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 22 VPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKT--LRRIYRGGVHPSIRGEVWEFLLGC 79
V + + K LS ++W + FT +G L G T L+R+ GGVHP IR EVW FLLG
Sbjct: 55 VAVIFYSRKRKHPLSPQQWKSLFTEDGRLRDGGTKFLKRVRNGGVHPRIRAEVWPFLLGV 114
Query: 80 YDPKSTFEERDQIRQRRRMQYATWKEECRQLF 111
YD ST +ERD ++ + R QY + +C +L
Sbjct: 115 YDFNSTKDERDAVKTQNRKQYEELRRQCTKLI 146
>Medtr1g007590.2 | Rab GTPase activator | HC | chr1:448550-444409 |
20130731
Length = 496
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 73/123 (59%), Gaps = 2/123 (1%)
Query: 205 AKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRLRGNFRCTNN 264
A+L +L YA D ++GY QGMSDL SP++ ++ ++ +AFWCF M++ R NFR +
Sbjct: 290 ARLVAILEAYALYDSEIGYCQGMSDLLSPIVSIISEDHEAFWCFVGFMKKARQNFRL--D 347
Query: 265 SVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXXFAFRMLMVLFRREFSFCDSLFLWEM 324
VG+ QL +A I + D F +RM++VLFRRE +F ++ LWE+
Sbjct: 348 EVGIRRQLELVAKIIKYKDGHLFKHLEKLQAEDCFFVYRMVVVLFRRELTFEQTICLWEV 407
Query: 325 MWA 327
MWA
Sbjct: 408 MWA 410
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 32/49 (65%)
Query: 63 GVHPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLF 111
GVHP IR EVW FLLG YD ST +ERD ++ + R QY + +C +L
Sbjct: 3 GVHPRIRAEVWPFLLGVYDFNSTKDERDAVKTQNRKQYEELRRQCTKLI 51
>Medtr1g072400.1 | Rab-GTPase-TBC domain protein | LC |
chr1:32136700-32132644 | 20130731
Length = 105
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 33/57 (57%), Positives = 48/57 (84%)
Query: 199 EKQENLAKLWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFWCFERLMRRL 255
E + N A LWDVL++Y W+D D+GY QGM+D+CSP++IL+++EA+ FWCF+R MRR+
Sbjct: 47 ENEANQANLWDVLSVYGWLDNDIGYVQGMNDICSPLVILIENEANCFWCFDRAMRRM 103
>Medtr3g083840.1 | RabGAP/TBC domain protein | HC |
chr3:37824348-37830080 | 20130731
Length = 432
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 41/301 (13%)
Query: 54 KTLRRIYRGGV--HPSIRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLF 111
+ LR+I G+ P +R +W+ LLG P + + ++R QY +K++ +
Sbjct: 96 RELRKIASQGIPDSPGLRSTIWKLLLGYLPPDRSLWSSE--LAKKRSQYKRFKQDIL-IN 152
Query: 112 PLVGSGRFITAPVISEDGQPIQEPLVLSETNSAEGLAVLPQDNNWPSSLNAASN-VETVA 170
P + R + D + +LS + G P SL S +
Sbjct: 153 PSEITRRMFNSASYDADDVKCETRGMLSRSQITHG--------EHPLSLGKTSIWNQFFQ 204
Query: 171 DKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQENLAK-----LWDVLALYAWIDKDVGYGQ 225
D +++ QI DV RT + F+ LAK L ++L ++A ++ + Y Q
Sbjct: 205 DTDIIE------QIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQ 258
Query: 226 GMSDLCSPMIILLDD----------EADAFWCFERLMRRLRGNF--RCTNNSVGVEAQLS 273
GM+++ +P+ + + EAD F+CF L+ R NF + N+ VG+ + ++
Sbjct: 259 GMNEVLAPLFYVFKNDPDEENAAFSEADTFFCFVELLSGFRDNFCQQLDNSIVGIRSTIT 318
Query: 274 NLASITQVIDPKXXXXXXXXXXXXXXF-AFRMLMVLFRREFSFCDSLFLWEMMWALEYDP 332
L+ + + D + F AFR + +L +EF F DSL +W+ L DP
Sbjct: 319 RLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFDFADSLRIWD---TLVSDP 375
Query: 333 D 333
D
Sbjct: 376 D 376
>Medtr8g085300.1 | RabGAP/TBC domain protein | HC |
chr8:35334451-35330009 | 20130731
Length = 443
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/326 (25%), Positives = 142/326 (43%), Gaps = 45/326 (13%)
Query: 21 DVPISRFKIKAGKTLSARKWHAAFTTEGYLDIGKTLRRIYRGGVHPS--IRGEVWEFLLG 78
DVP S + + L A ++ +D+ + LRRI GV S IR +W+ LLG
Sbjct: 81 DVPPSAYDVSHHAQLLAE------LSKKVMDL-RELRRISCQGVPDSAGIRSTLWKLLLG 133
Query: 79 CYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPLVGSGRFITAPVISEDGQPIQEPLVL 138
P + ++R QY +KEE + P + R + + D ++ +L
Sbjct: 134 YLPPDRALWSSE--LAKKRSQYKQFKEEIL-MNPSEITRRMYNSTIGDADDAAKRDRALL 190
Query: 139 SETNSAEGLAVLPQDNNWPSSLNAASN-VETVADKRVVQWLLTLHQIGLDVVRTDRTLVF 197
S + +P D + P SL S + D ++ QI DV RT + F
Sbjct: 191 SRSE-------IPHDEH-PLSLGKTSVWNQFFQDTEIID------QIDRDVKRTHPDMHF 236
Query: 198 YEKQENLAK-----LWDVLALYAWIDKDVGYGQGMSDLCSPMIILLDDEADAFW------ 246
+ AK L ++L ++A ++ V Y QGM++L +P+ + ++ D
Sbjct: 237 FSGDSKFAKSNQEALKNILIIFAKLNPGVKYVQGMNELLAPLFYVFKNDPDEENAAFAEA 296
Query: 247 ----CFERLMRRLRGNF--RCTNNSVGVEAQLSNLASITQVIDPKXXXXXXXXXXXXXXF 300
CF L+ LR NF + N+ VG+ + ++ L+ + + D + F
Sbjct: 297 DAFFCFVELLSGLRDNFVQQLDNSVVGIRSTITKLSQLLRKHDEELWRHLEITSKINPQF 356
Query: 301 -AFRMLMVLFRREFSFCDSLFLWEMM 325
AFR + +L +EF+F DSL +W+ +
Sbjct: 357 YAFRWITLLLTQEFNFADSLHIWDTL 382
>Medtr5g065510.1 | GTPase-activating gyp7-like protein, putative |
HC | chr5:27555955-27555475 | 20130731
Length = 101
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 30 KAGKTLSARKWHAAFTTEGYL-DIGKTLRRIYRGGVHPSIRGEVWEFLLGCYDPKSTFEE 88
K + LS ++W ++F +G + + GK L+R+ RGGV PSIR EVW FLLG Y +T +E
Sbjct: 21 KRKRVLSPQQWESSFAPDGRIRNRGKLLKRVRRGGVDPSIRAEVWPFLLGVYGLDTTKDE 80
Query: 89 RDQIRQRRRMQY 100
RD IR + R +Y
Sbjct: 81 RDVIRTQNRKKY 92
>Medtr4g114580.1 | RabGAP/TBC domain protein | HC |
chr4:47118501-47122390 | 20130731
Length = 467
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 132/301 (43%), Gaps = 54/301 (17%)
Query: 56 LRRIYRGGVHPS--IRGEVWEFLLGCYDPKSTFEERDQIRQRRRMQYATWKEECRQLFPL 113
LRRI G+ +R W+ LLG Y P Q++ R ++Y K+E
Sbjct: 126 LRRIASTGIPDGGGLRATAWKLLLG-YLPLCHELWETQLKDNR-LKYVNMKKE------- 176
Query: 114 VGSGRFITAPVISEDGQPI-QEPLVLSETNSAEGLAV--------LPQDNNWPSSLNAAS 164
++S + I +EP LS T + A+ +P +++ P SL+ S
Sbjct: 177 ----------LLSNPSEHIWKEPKHLSSTKRHDNNAIDGPLRRHEIPVEDH-PLSLDKES 225
Query: 165 NVETVADKRVVQWLLTLHQIGLDVVRTDRTLVFYEKQENLAK-----LWDVLALYAWIDK 219
++ Q QI D+ RT + F+ + + ++ + ++L L+A ++
Sbjct: 226 -----LWRQYFQHTEIAEQIDRDLQRTHPDMPFFSAETSFSRKNREAMKNILLLFAKLNP 280
Query: 220 DVGYGQGMSDLCSPMIILL----------DDEADAFWCFERLMRRLRGNF--RCTNNSVG 267
+ Y QGM+++ +P+ + + EAD+F CF R++ +F + N+S G
Sbjct: 281 AICYVQGMNEVLAPIYYVFSADNDNQNAANAEADSFSCFVRILGDSVDHFCQQLDNSSSG 340
Query: 268 VEAQLSNLASITQVIDPKXXXXXXXXXXXXXXF-AFRMLMVLFRREFSFCDSLFLWEMMW 326
+ A LS L+ + +V D + F AFR + +L +EF F L +W+ +
Sbjct: 341 ILATLSRLSDLLKVNDEQLWHHLEFTTKVKPQFYAFRWITLLLTQEFKFESILRIWDTLL 400
Query: 327 A 327
+
Sbjct: 401 S 401
>Medtr4g079330.1 | Rab-GTPase-TBC domain protein | LC |
chr4:30642080-30641846 | 20130731
Length = 63
Score = 54.3 bits (129), Expect = 2e-07, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 29/33 (87%)
Query: 226 GMSDLCSPMIILLDDEADAFWCFERLMRRLRGN 258
GM+D+C P++IL+++EA+ FWCF+R MRR+ G+
Sbjct: 28 GMNDICPPLVILIENEANCFWCFDRAMRRMVGS 60