Miyakogusa Predicted Gene

Lj0g3v0105849.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0105849.1 Non Chatacterized Hit- tr|I1K677|I1K677_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.27558
PE,38.18,3e-18,Ring finger,Zinc finger, RING-type; RING/U-box,NULL;
ZF_RING_2,Zinc finger, RING-type; no
descriptio,NODE_73965_length_1135_cov_18.489868.path1.1
         (735 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome...   478   e-134
gnl|LJGI|AV767167                                                     145   4e-34

>gnl|LJGI|TC75381 similar to UniRef100_A7Q7T5 Cluster: Chromosome chr18 scaffold_61,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_61, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (42%)
          Length = 504

 Score =  478 bits (241), Expect = e-134
 Identities = 241/241 (100%)
 Strand = Plus / Plus

                                                                       
Query: 158 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcctcgaagggtggattgggcttctctcagaatgagatcatcactctccgtttcacagg 323

                                                                       
Query: 218 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 atgacaatgacaatggcaatgacatctccacttctggtgcttgtttggggttgaagaaag 383

                                                                       
Query: 278 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatttagagaaatgctgcctattattgtgtacagggaaagcttctccgtcaatgacacac 443

                                                                       
Query: 338 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 397
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 aatgctcagtgtgccttttggactaccaagcagaagatagacttcaacagataccggcat 503

            
Query: 398 g 398
           |
Sbjct: 504 g 504



 Score =  176 bits (89), Expect = 1e-43
 Identities = 89/89 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtctgaatcatactcagactcagattccagttgttgctcaactagatctgatgctgct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 atgtctgaatcatactcagactcagattccagttgttgctcaactagatctgatgctgct 166

                                        
Query: 61  gcttcagctgaactgaagctgtaccgagc 89
           |||||||||||||||||||||||||||||
Sbjct: 167 gcttcagctgaactgaagctgtaccgagc 195


>gnl|LJGI|AV767167 
          Length = 313

 Score =  145 bits (73), Expect = 4e-34
 Identities = 73/73 (100%)
 Strand = Plus / Minus

                                                                       
Query: 663 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 722
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 aattggcgctcactgcattgatgttgaagggcaaaatgcacaacacaatcaattggagca 254

                        
Query: 723 tgaatatatatga 735
           |||||||||||||
Sbjct: 253 tgaatatatatga 241