Miyakogusa Predicted Gene
- Lj0g3v0104479.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0104479.1 Non Chatacterized Hit- tr|I1KD24|I1KD24_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.5,0,seg,NULL;
DUF4378,Domain of unknown function DUF4378; VARLMGL,NULL; SUBFAMILY
NOT NAMED,NULL; FAMILY,CUFF.5934.1
(3294 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC70793 similar to UniRef100_A7QHZ9 Cluster: Chromosome... 1610 0.0
gnl|LJGI|AV410481 similar to UniRef100_A7QHZ9 Cluster: Chromosom... 815 0.0
gnl|LJGI|BP084445 similar to UniRef100_A7QHZ9 Cluster: Chromosom... 462 e-129
gnl|LJGI|TC64631 homologue to UniRef100_Q2HTC4 Cluster: Conserve... 80 1e-13
>gnl|LJGI|TC70793 similar to UniRef100_A7QHZ9 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (57%)
Length = 1035
Score = 1610 bits (812), Expect = 0.0
Identities = 815/816 (99%)
Strand = Plus / Plus
Query: 2479 gaggctaaagatgagtggaaccctgtagtagatagcctttcatttaacagcacaggatcc 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaggctaaagatgagtggaaccctgtagtagatagcctttcatttaacagcacaggatcc 61
Query: 2539 gcagagatcaatcgcaagaaattacagaacatagatcaccttgtgcagaagcttcgacgg 2598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gcagagatcaatcgcaagaaattacagaacatagatcaccttgtgcagaagcttcgacgg 121
Query: 2599 ctgaactctagtcacgacgaagcaagaatcgactacattgcttccttatgtgaaaacaca 2658
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 122 ctgaactctagtcacgacgaagcaagaatcgactacattacttccttatgtgaaaacaca 181
Query: 2659 aatccagaccacagatacatctctgaaatattactagcttcaggtctcctactaagagac 2718
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aatccagaccacagatacatctctgaaatattactagcttcaggtctcctactaagagac 241
Query: 2719 ctaagttctgagctgctaacatttcaacttcactcgtcgggtcaccccatcaaccccgag 2778
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 ctaagttctgagctgctaacatttcaacttcactcgtcgggtcaccccatcaaccccgag 301
Query: 2779 ttattcctcgtcttggagcagaccaaggctagtaatttgctttcgaaagaagagagcaac 2838
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 ttattcctcgtcttggagcagaccaaggctagtaatttgctttcgaaagaagagagcaac 361
Query: 2839 aatggaaaaatcacttgcttgaagctgaatgctgagagatttcacaggaaactcatcttt 2898
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 aatggaaaaatcacttgcttgaagctgaatgctgagagatttcacaggaaactcatcttt 421
Query: 2899 gacgctgtgaatgaaattcttggtgcgaaattagcctcctcccctgagccgtggtttcag 2958
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gacgctgtgaatgaaattcttggtgcgaaattagcctcctcccctgagccgtggtttcag 481
Query: 2959 ccgaactgtgacagactcacgaagaaatcgctcagtgctcaaaagcttcttaaagaacta 3018
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ccgaactgtgacagactcacgaagaaatcgctcagtgctcaaaagcttcttaaagaacta 541
Query: 3019 tgctttgagatagaaaaagttcaagccaagaagccagggtggtgcttagaattggaaggt 3078
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tgctttgagatagaaaaagttcaagccaagaagccagggtggtgcttagaattggaaggt 601
Query: 3079 gaagaggatgatggtctgaaaagtattctgtgggaagatgtgatgcatgaaggttcagaa 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaagaggatgatggtctgaaaagtattctgtgggaagatgtgatgcatgaaggttcagaa 661
Query: 3139 agttggaaaaacttcaatggtgaaatacctgggtttgttttggatgttgagagactcata 3198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 agttggaaaaacttcaatggtgaaatacctgggtttgttttggatgttgagagactcata 721
Query: 3199 tttaaggacttagtaggtgagattgtgattggagaagccgctagtatgcggctcaagcca 3258
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttaaggacttagtaggtgagattgtgattggagaagccgctagtatgcggctcaagcca 781
Query: 3259 tcggttaggcgcaggaaactatttggaaagtagttg 3294
||||||||||||||||||||||||||||||||||||
Sbjct: 782 tcggttaggcgcaggaaactatttggaaagtagttg 817
>gnl|LJGI|AV410481 similar to UniRef100_A7QHZ9 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 411
Score = 815 bits (411), Expect = 0.0
Identities = 411/411 (100%)
Strand = Plus / Plus
Query: 2144 attcattaagtgtaagttgccatggggatgaactttctctgcaatcagacagcaccgccg 2203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 attcattaagtgtaagttgccatggggatgaactttctctgcaatcagacagcaccgccg 60
Query: 2204 aagtcaccagcaggttccaatctgctgatattgatgacagccgaagccagtccttgaagg 2263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 aagtcaccagcaggttccaatctgctgatattgatgacagccgaagccagtccttgaagg 120
Query: 2264 ctataaagcagttggtttcggaagcagttcatgaaaaatcaactcccaggttggatgagg 2323
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ctataaagcagttggtttcggaagcagttcatgaaaaatcaactcccaggttggatgagg 180
Query: 2324 atgagacaattgcagaacttgcaacggatgcgccagaacacccaagtcctgtctcagttc 2383
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 atgagacaattgcagaacttgcaacggatgcgccagaacacccaagtcctgtctcagttc 240
Query: 2384 ttgatgactcagtatatagagatgatctgctatcccctgtaaagcagatatctgaagttc 2443
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 ttgatgactcagtatatagagatgatctgctatcccctgtaaagcagatatctgaagttc 300
Query: 2444 caaacgctgatgatgctcaagaaactgaagaaaatgaggctaaagatgagtggaaccctg 2503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 caaacgctgatgatgctcaagaaactgaagaaaatgaggctaaagatgagtggaaccctg 360
Query: 2504 tagtagatagcctttcatttaacagcacaggatccgcagagatcaatcgca 2554
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 tagtagatagcctttcatttaacagcacaggatccgcagagatcaatcgca 411
>gnl|LJGI|BP084445 similar to UniRef100_A7QHZ9 Cluster: Chromosome chr17 scaffold_101,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_101, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 411
Score = 462 bits (233), Expect = e-129
Identities = 233/233 (100%)
Strand = Plus / Minus
Query: 2217 gttccaatctgctgatattgatgacagccgaagccagtccttgaaggctataaagcagtt 2276
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 gttccaatctgctgatattgatgacagccgaagccagtccttgaaggctataaagcagtt 352
Query: 2277 ggtttcggaagcagttcatgaaaaatcaactcccaggttggatgaggatgagacaattgc 2336
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ggtttcggaagcagttcatgaaaaatcaactcccaggttggatgaggatgagacaattgc 292
Query: 2337 agaacttgcaacggatgcgccagaacacccaagtcctgtctcagttcttgatgactcagt 2396
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 agaacttgcaacggatgcgccagaacacccaagtcctgtctcagttcttgatgactcagt 232
Query: 2397 atatagagatgatctgctatcccctgtaaagcagatatctgaagttccaaacg 2449
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atatagagatgatctgctatcccctgtaaagcagatatctgaagttccaaacg 179
>gnl|LJGI|TC64631 homologue to UniRef100_Q2HTC4 Cluster: Conserved oligomeric Golgi
complex component 4, related; n=1; Medicago
truncatula|Rep: Conserved oligomeric Golgi complex
component 4, related - Medicago truncatula (Barrel
medic), partial (18%)
Length = 942
Score = 79.8 bits (40), Expect = 1e-13
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 atggcagcaaagctcctgcattctttagcagatgacaacccagatctgcagaagcagata 60
||||||| ||||||||||||||||||||| |||||| || | ||||||| |||||||||
Sbjct: 793 atggcagaaaagctcctgcattctttagcggatgacgacaccgatctgcgaaagcagata 852
Query: 61 ggatgcat 68
||||||||
Sbjct: 853 ggatgcat 860