Miyakogusa Predicted Gene
- Lj0g3v0104059.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0104059.1 Non Chatacterized Hit- tr|E1ZBP1|E1ZBP1_CHLVA
Putative uncharacterized protein OS=Chlorella variabil,66.67,0.094,no
description,NULL; seg,NULL; DNA_MISMATCH_REPAIR_2,DNA mismatch repair
protein MutS, C-terminal; A,CUFF.5903.1
(272 letters)
Database: Glyma1.pep
75,778 sequences; 25,431,882 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Glyma02g46180.1 400 e-112
Glyma17g13050.1 110 2e-24
Glyma09g32150.1 108 8e-24
Glyma19g40350.1 105 4e-23
Glyma07g09660.1 105 5e-23
Glyma11g03750.1 95 8e-20
Glyma10g38130.1 77 1e-14
Glyma07g31550.1 59 5e-09
Glyma10g26450.1 58 9e-09
Glyma20g29680.1 57 3e-08
Glyma20g17660.1 55 9e-08
Glyma14g36780.1 53 4e-07
Glyma08g26960.1 52 6e-07
Glyma02g38590.1 50 3e-06
>Glyma02g46180.1
Length = 823
Score = 400 bits (1029), Expect = e-112, Method: Compositional matrix adjust.
Identities = 200/246 (81%), Positives = 208/246 (84%), Gaps = 30/246 (12%)
Query: 1 MERAITRDLFSRVLLFSTHLIKVATFAAELDW---------------------------- 32
MERAI RDLFSR+LLF THLIKVATFAAELD
Sbjct: 492 MERAIARDLFSRILLFRTHLIKVATFAAELDCFLSMALVARQHNYVRPSLTEENLLDIKN 551
Query: 33 --HVLQEMTVDTFIPNDTKMLHDGRINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPAD 90
HVLQEMTVDTFIPNDT++LHDGRINIITGPNFSGKSIYIKQVA+IVFLSHIG FVPAD
Sbjct: 552 GRHVLQEMTVDTFIPNDTRILHDGRINIITGPNFSGKSIYIKQVAIIVFLSHIGSFVPAD 611
Query: 91 AATVGLTDRIFCATGSRLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDG 150
+ATVGLTDRIFCATGSRLMTAEQSTFMIDLHQ+GMMLRHATSRSLCLVDEFGKGTLTEDG
Sbjct: 612 SATVGLTDRIFCATGSRLMTAEQSTFMIDLHQIGMMLRHATSRSLCLVDEFGKGTLTEDG 671
Query: 151 TGLLAGTINHFVTYDEPPKVFVCTHLMDLLHGHSLTKSEQIMFYTMSILRPDESSTQIED 210
GLLAGTINHFVT DEPPKVFVCTHLMDLLHGHSLTKSEQI FYTMS+LRPDE+ST IED
Sbjct: 672 IGLLAGTINHFVTTDEPPKVFVCTHLMDLLHGHSLTKSEQIKFYTMSMLRPDENSTHIED 731
Query: 211 IVFLYR 216
IVFLYR
Sbjct: 732 IVFLYR 737
>Glyma17g13050.1
Length = 942
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 107/202 (52%), Gaps = 12/202 (5%)
Query: 42 TFIPNDTKMLHDGR--INIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTDR 99
FIPND K++ G+ IITGPN GKS +I+QV + + ++ +G FVP D A++ + D
Sbjct: 647 NFIPNDCKLVR-GKTWFQIITGPNMGGKSTFIRQVGVNILMAQVGSFVPCDNASISVRDC 705
Query: 100 IFCATGS-RLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTI 158
IF G+ STFM ++ + +L+ AT +SL ++DE G+GT T DG GL
Sbjct: 706 IFARVGAGDCQLRGVSTFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAIC 765
Query: 159 NHFVTYDEPPKVFVCTHLMDL----LHGHSLTKSEQIM-FYTMSILRPDESSTQIEDIVF 213
H V + P +F TH +L L S +QI+ + +SST+ +
Sbjct: 766 EHIVEVIKAPTLF-ATHFHELTALALENVSNDSQKQIVGVANYHVSAHIDSSTR--KLTM 822
Query: 214 LYRLVPGHAHHSYGLHCALLAG 235
LY++ PG S+G+H A A
Sbjct: 823 LYKVEPGACDQSFGIHVAEFAN 844
>Glyma09g32150.1
Length = 1093
Score = 108 bits (269), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 108/206 (52%), Gaps = 22/206 (10%)
Query: 44 IPNDTKM--LHDG---RINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTD 98
+PND + DG R ++TGPN GKS ++ L V ++ +GC+VP ++ + D
Sbjct: 780 VPNDVILGENEDGSHPRTLLLTGPNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVD 839
Query: 99 RIFCATGS--RLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAG 156
IF G+ R+MT E STF ++ + ++L++AT SL ++DE G+GT T DG +
Sbjct: 840 IIFTRLGAKDRIMTGE-STFFVECTETALVLQNATQDSLVILDELGRGTSTFDGYAIAYA 898
Query: 157 TINHFVTYDEPPKVFVCTHLMDLLHGHSLTKS----EQIMFYTMSIL---RPDESSTQIE 209
H + V ++ H HSLTK +++ M+ + D S + +
Sbjct: 899 VFRHLIEK-------VNCRMLFATHYHSLTKEFASHPRVIMQHMACAFKSKSDTHSMRDQ 951
Query: 210 DIVFLYRLVPGHAHHSYGLHCALLAG 235
++VFLYRL G SYGL AL+AG
Sbjct: 952 ELVFLYRLASGPCPESYGLQVALMAG 977
>Glyma19g40350.1
Length = 1273
Score = 105 bits (263), Expect = 4e-23, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 100/200 (50%), Gaps = 15/200 (7%)
Query: 43 FIPNDTKMLHDGRINII--TGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTDRI 100
F+PND + + I TGPN GKS ++QV L V L+ +G VPA++ + DRI
Sbjct: 1006 FVPNDITIGGSDHASFILLTGPNMGGKSTLLRQVCLTVILAQVGADVPAESFDLSPVDRI 1065
Query: 101 FCATGSR-LMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTIN 159
F G++ + A QSTF+ +L + ML AT SL +DE G+GT T DG + +
Sbjct: 1066 FVRMGAKDNIMAGQSTFLTELSETASMLSSATCNSLVALDELGRGTATSDGQAIAESVLE 1125
Query: 160 HFVTYDEPPKVFVCTHLMDLLHGHSLT----KSEQIMFYTMSILRPDESSTQIEDIVFLY 215
H V + C L H H L K ++ M+ + ++++ FLY
Sbjct: 1126 HLV------RKVQCRGLFS-THYHRLAVDYLKDPKVCLCHMAC-QVGSGIAGLDEVTFLY 1177
Query: 216 RLVPGHAHHSYGLHCALLAG 235
RL PG SYG++ A +AG
Sbjct: 1178 RLTPGACPKSYGVNVARIAG 1197
>Glyma07g09660.1
Length = 1053
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 106/206 (51%), Gaps = 22/206 (10%)
Query: 44 IPNDTKM--LHDG---RINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTD 98
+PND + DG R ++TGPN GKS ++ L V ++ +GC+VP ++ + D
Sbjct: 777 VPNDVILGENEDGLYPRTLLLTGPNMGGKSTLLRSTCLAVIMAQLGCYVPCESCVLSAVD 836
Query: 99 RIFCATGS--RLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAG 156
IF G+ R+MT E STF I+ + +L++AT SL ++DE G+GT T DG +
Sbjct: 837 IIFTRLGAKDRIMTGE-STFFIECTETASVLQNATQDSLVILDELGRGTSTFDGYAIAYA 895
Query: 157 TINHFVTYDEPPKVFVCTHLMDLLHGHSLTKS----EQIMFYTMSIL---RPDESSTQIE 209
H + V ++ H H LTK +++ M+ + D S + +
Sbjct: 896 VFRHLIEK-------VNCRMLFATHYHPLTKEFASHPRVIMQHMACAFNSKSDTHSMRDQ 948
Query: 210 DIVFLYRLVPGHAHHSYGLHCALLAG 235
++VFLYRL G SYGL AL+AG
Sbjct: 949 ELVFLYRLASGPCPESYGLQVALMAG 974
>Glyma11g03750.1
Length = 759
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 77/132 (58%), Gaps = 1/132 (0%)
Query: 33 HVLQEMTVDTFIPNDTKMLHDGRINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAA 92
H + E + F+ N+ + + I+ GPN SGKS Y++QV LIV L+ +GC+VPA +
Sbjct: 489 HPILESIHNDFVANNIFLTEASNMAIVMGPNMSGKSTYLQQVCLIVILAQVGCYVPARFS 548
Query: 93 TVGLTDRIFCATGS-RLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGT 151
TV + DR+F G+ + + STFM ++ + ++++ + RSL ++DE G+ T + DG
Sbjct: 549 TVRVVDRMFTRMGAVDNLESNSSTFMTEMKETAFIMQNVSQRSLIVMDELGRATSSSDGF 608
Query: 152 GLLAGTINHFVT 163
+ H ++
Sbjct: 609 AIAWSCCEHLLS 620
>Glyma10g38130.1
Length = 320
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 34 VLQEMTVDTFIPNDTKMLHDGR-INIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAA 92
VL+ D F+PNDT M DG I+TGPN GKS YI+QVALI ++ +G FVPA +A
Sbjct: 112 VLKTTLQDNFVPNDTNMHADGENCQIVTGPNMGGKSCYIRQVALIAIMAQVGSFVPASSA 171
Query: 93 TVGLTDRIFCATGS 106
+ + DRI+ G+
Sbjct: 172 KLHVLDRIYTRMGA 185
>Glyma07g31550.1
Length = 914
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 67/141 (47%), Gaps = 4/141 (2%)
Query: 41 DTFIPNDTKMLHDGRINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPADA-ATVGLTDR 99
D +P D K+ H R+ +I+GPN GK+ +K + L +S G +PA + D
Sbjct: 413 DFPVPVDFKIGHGTRVVVISGPNTGGKTASMKTLGLASLMSKAGMHLPAKKNPKLPWFDL 472
Query: 100 IFCATGS-RLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTI 158
I G + + STF + ++ +L A+++SL L+DE G GT +G L A +
Sbjct: 473 ILADIGDHQSLEQNLSTFSGHISRICKILEVASTQSLVLIDEIGGGTDPSEGVALSASIL 532
Query: 159 NHFVTYDEPPKVFVCTHLMDL 179
+ D V TH DL
Sbjct: 533 QYL--KDRVNLAVVTTHYADL 551
>Glyma10g26450.1
Length = 975
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 58/102 (56%), Gaps = 2/102 (1%)
Query: 58 IITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTDRIFCATGSRLMTAE-QSTF 116
++TGPN GKS +++ + L G VPA++A + D I S A+ +S+F
Sbjct: 613 LLTGPNGGGKSSFLRSICAAALLGICGLMVPAESALIPYFDSITLHMKSYDSPADKKSSF 672
Query: 117 MIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTI 158
+++ ++ ++ T+RSL LVDE +GT T GT +AG+I
Sbjct: 673 QVEMSELRSIIGGTTNRSLVLVDEICRGTETAKGT-CIAGSI 713
>Glyma20g29680.1
Length = 835
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 34 VLQEMTVDTFIPNDTKMLHDGR-INIITGPNFSGKSIYIKQVALIVFLSH 82
VL+ D F+PNDT M DG I+TGPN GKS YI+QVALIV ++
Sbjct: 763 VLETTLQDNFVPNDTNMHADGEYCQIVTGPNMGGKSCYIRQVALIVIMAQ 812
>Glyma20g17660.1
Length = 665
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 56/102 (54%), Gaps = 2/102 (1%)
Query: 58 IITGPNFSGKSIYIKQVALIVFLSHIGCFVPADAATVGLTDRIFCATGSRLMTAE-QSTF 116
++TGPN GKS ++ + L G VPA++A + D I S A+ +S+F
Sbjct: 320 LLTGPNGGGKSSLLRSICAAALLGICGLMVPAESAHIPYFDSIMLHMNSYDSPADKKSSF 379
Query: 117 MIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTI 158
+++ ++ ++ T +SL L+DE +GT T GT +AG+I
Sbjct: 380 QVEMSELRSIIGGTTKKSLVLIDEICRGTETAKGT-CIAGSI 420
>Glyma14g36780.1
Length = 711
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 61/128 (47%), Gaps = 9/128 (7%)
Query: 44 IPNDTKMLHDGRINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPA-DAATVGLTDRIFC 102
+P D + R+ +ITGPN K+I +K V L ++ G +V A ++A + D +F
Sbjct: 348 VPVDFSVSQKTRVIVITGPNTGSKTICLKTVGLAAMMAKSGLYVLASESAQIPWFDFVFA 407
Query: 103 ATG-SRLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDE-------FGKGTLTEDGTGLL 154
G + ++ STF L Q+ + +TS+SL L+DE G GT +G L
Sbjct: 408 DIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLVLLDEALCNVIYVGGGTNPLEGAALG 467
Query: 155 AGTINHFV 162
+ F
Sbjct: 468 MALLKSFA 475
>Glyma08g26960.1
Length = 298
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 31/42 (73%)
Query: 65 SGKSIYIKQVALIVFLSHIGCFVPADAATVGLTDRIFCATGS 106
SGKS Y++QV LIV L+ +GC+VPA +TV + DR+F G+
Sbjct: 180 SGKSTYLQQVCLIVILAQVGCYVPARFSTVRVVDRMFTRMGA 221
>Glyma02g38590.1
Length = 756
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 44 IPNDTKMLHDGRINIITGPNFSGKSIYIKQVALIVFLSHIGCFVPA-DAATVGLTDRIFC 102
+P D + R+ +ITGPN GK+I +K V L ++ G +V A ++A + D +F
Sbjct: 370 VPVDFLVSQKTRVIVITGPNTGGKTICLKTVGLAAMMAKSGLYVLASESAQIPWFDSVFA 429
Query: 103 ATG-SRLMTAEQSTFMIDLHQVGMMLRHATSRSLCLVDEFGKGTLTEDGTGLLAGTINHF 161
G + ++ STF L Q+ + +TS+SL G GT +G L + F
Sbjct: 430 DIGDEQSLSQSLSTFSGHLKQISNIKSQSTSQSLV-----GAGTNPLEGAALGMALLESF 484
Query: 162 V 162
Sbjct: 485 A 485