Miyakogusa Predicted Gene

Lj0g3v0103039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0103039.1 Non Chatacterized Hit- tr|I1M0W6|I1M0W6_SOYBN
Uncharacterized protein (Fragment) OS=Glycine max
PE=4,44.26,0.000000000000002, ,CUFF.5826.1
         (190 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma12g36460.1                                                       159   2e-39
Glyma13g27170.1                                                        87   9e-18

>Glyma12g36460.1 
          Length = 883

 Score =  159 bits (402), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/188 (50%), Positives = 124/188 (65%), Gaps = 12/188 (6%)

Query: 1   MESEVNMLQSKRSAPNGISP--QGRKRLKLSSESFPYSSHDKAIPEAPNNSPHVE----- 53
           MES  ++  SKR  P G SP   G KRL+LSS+S PY + D+  P+ P N   V+     
Sbjct: 1   MESADDVSASKRPLPTGFSPGPDGPKRLRLSSDSLPYPACDQIEPKTPKNPNVVDYSNPF 60

Query: 54  ---DPLKCLETGRFGSVTKDIEALITRKMQVLGPFFARFPKLVTQELKVAVDRDEEIDKL 110
              D L  LE G+FGSVTKDIEALI  KMQ++GP+FA++P LV Q LKV    DEE  KL
Sbjct: 61  AITDILDRLENGKFGSVTKDIEALIALKMQIMGPYFAKYPILVNQLLKVVTHHDEETPKL 120

Query: 111 ENKKGIVMSQEKVIDLKEEHIKKDATAAQH-VVIIDSDEEDDRNVKSSLPFNEAVLLKSL 169
           EN++   ++ + VIDL+ E+ +KD  A  + VVIIDSDEEDDR+ KS +PF+E VL + +
Sbjct: 121 ENQQVTGLTHQSVIDLEGEYTEKDVPAVPNTVVIIDSDEEDDRDKKSVIPFHEVVLPRKV 180

Query: 170 H-SPALKM 176
             SPALK+
Sbjct: 181 APSPALKV 188


>Glyma13g27170.1 
          Length = 824

 Score = 87.4 bits (215), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 54/122 (44%), Positives = 77/122 (63%), Gaps = 24/122 (19%)

Query: 62  GRFGSVTKDIEALITRKMQVLGPFFARFPKLVTQELKVAVDRDEEIDKLENKK--GIV-- 117
           G++GSVTKDIEAL  R+M+VLGP+ A++PKL  Q +   +DRDEEI K E+++  G+   
Sbjct: 2   GKYGSVTKDIEALFARRMKVLGPYLAKYPKL-NQLIHAVIDRDEEILKSEDQQVTGLTHQ 60

Query: 118 -----------------MSQEKVIDLKEEHIKKDATAAQ-HVVI-IDSDEEDDRNVKSSL 158
                            ++ + VIDL+ E+ +KD  AAQ H +I IDSDEEDD + KS +
Sbjct: 61  NVIDLETPKLEVQQITGLTLQNVIDLEGENTEKDVHAAQIHGLIHIDSDEEDDGDKKSIV 120

Query: 159 PF 160
           P+
Sbjct: 121 PY 122