Miyakogusa Predicted Gene

Lj0g3v0102259.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0102259.1 tr|G7KCX1|G7KCX1_MEDTR GTP-binding protein
OS=Medicago truncatula GN=MTR_5g089970 PE=4 SV=1,72.79,0,MMR_HSR1,GTP
binding domain; coiled-coil,NULL; GTP-BINDING PROTEIN HFLX,NULL;
GTP-BINDING PROTEIN HF,CUFF.5763.1
         (603 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g089970.1 | GTP-binding protein HflX | HC | chr5:39142908-...   636   0.0  
Medtr5g089970.2 | GTP-binding protein HflX | HC | chr5:39142903-...   609   e-174
Medtr1g022980.1 | GTP-binding protein HflX | HC | chr1:7275413-7...    94   4e-19

>Medtr5g089970.1 | GTP-binding protein HflX | HC |
           chr5:39142908-39138302 | 20130731
          Length = 555

 Score =  636 bits (1640), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 342/548 (62%), Positives = 377/548 (68%), Gaps = 40/548 (7%)

Query: 57  VVQPRLRPEKLLQAKLNEALCLANSLEEQRDGYFHTDFFDKPLPPHLLVQNPSVKGHKPR 116
           VVQPRLR EKLLQAKLNEALCLANSLE+QRDGYFHTDFFD PLPPH++VQNPS+KGHK R
Sbjct: 45  VVQPRLRSEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDLPLPPHVIVQNPSLKGHKAR 104

Query: 117 ADTYFGPGTVDNIKCNLRAAEDKDGVDAVFVNTILSGVQQRNLERAWDKPVLDRVGLIIE 176
           ADTYFGPGTVD IKC+L A E K  VDAVFVN ILSG+Q RN+ERAW+KPV+DRVGLIIE
Sbjct: 105 ADTYFGPGTVDTIKCHLNAVESKGEVDAVFVNAILSGIQIRNMERAWNKPVVDRVGLIIE 164

Query: 177 IFNAHAFTXXXXXXXXXXXXSFKKTXXXXXXXXXXXXTFGAHGETEVVXXXXXXXXXXXX 236
           IFNAHAFT            S+KK+            TFG  GE EVV            
Sbjct: 165 IFNAHAFTKEAKLQAELAALSYKKSRLVRVLGPNGRLTFGGSGEAEVVSARGRGSGGQGF 224

Query: 237 XXXXXETEXXXXXXXXXXXXXXXXTQIEEVRRTRALQRAGRKRHGGSLGQGLATVAVVGY 296
                ETE                TQIEEVRRTRA+QRAGRKR GGS  Q LAT+AVVGY
Sbjct: 225 MSGAGETELQLQRRRLLDRRNYLLTQIEEVRRTRAVQRAGRKRQGGSSAQRLATIAVVGY 284

Query: 297 TNAGKSTLVSECIVILGKVSFTVYLYAFTXXXXXXXXXXXXXHCRLFATVDPRVRSAVLP 356
           TNAGKSTLVS              LY+                CRLFATVDPR+RSAVLP
Sbjct: 285 TNAGKSTLVSNLT--------DSDLYS---------------DCRLFATVDPRLRSAVLP 321

Query: 357 SGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVL 416
           SGRKVL SDTVGFISDLPV+LVEAFHATLEEVVEADLLVHVVDS+APNL+EHR+TVFQVL
Sbjct: 322 SGRKVLFSDTVGFISDLPVKLVEAFHATLEEVVEADLLVHVVDSTAPNLEEHRTTVFQVL 381

Query: 417 QQIGVSEEKLQNMIEVWNKIXXXXXXXXXXXXXXXXXXXXXXXXXXXTSMITAENEGTEE 476
           QQIGVS+EKLQNMIEVWNKI                              +  + E  E 
Sbjct: 382 QQIGVSQEKLQNMIEVWNKIDAEEEFTDVDENVD--------------EHLNEDEEADET 427

Query: 477 PEYVCERSLGDLEAVEEKEDYSDGWLY-EDTLVNEDDFCSPSSAADPQNESS-KDNVVEK 534
                E  +      EEKEDYSDGWLY EDT++NE DFC PSSAAD Q ESS KDN VE 
Sbjct: 428 SSIDGEEDVNIETLTEEKEDYSDGWLYEEDTVLNEGDFCLPSSAADQQIESSNKDNSVEN 487

Query: 535 YSSMGPPAPHVKTSAVMGVGLQELLELIDEKLSAQDKKLKGAQVVERNNIFHKKWRPSHT 594
             +M P +PHVKTSA+ GVGLQEL+ELIDEKLS+QD+KLKGAQVVER N+F +KWRPSHT
Sbjct: 488 AGAMLPSSPHVKTSAITGVGLQELMELIDEKLSSQDEKLKGAQVVER-NLFDRKWRPSHT 546

Query: 595 ENSSIAVE 602
           ++SSI VE
Sbjct: 547 QDSSIVVE 554


>Medtr5g089970.2 | GTP-binding protein HflX | HC |
           chr5:39142903-39138331 | 20130731
          Length = 547

 Score =  609 bits (1570), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 334/548 (60%), Positives = 369/548 (67%), Gaps = 48/548 (8%)

Query: 57  VVQPRLRPEKLLQAKLNEALCLANSLEEQRDGYFHTDFFDKPLPPHLLVQNPSVKGHKPR 116
           VVQPRLR EKLLQAKLNEALCLANSLE+QRDGYFHTDFFD PLPPH++VQNPS+KGHK R
Sbjct: 45  VVQPRLRSEKLLQAKLNEALCLANSLEDQRDGYFHTDFFDLPLPPHVIVQNPSLKGHKAR 104

Query: 117 ADTYFGPGTVDNIKCNLRAAEDKDGVDAVFVNTILSGVQQRNLERAWDKPVLDRVGLIIE 176
           A        VD IKC+L A E K  VDAVFVN ILSG+Q RN+ERAW+KPV+DRVGLIIE
Sbjct: 105 A--------VDTIKCHLNAVESKGEVDAVFVNAILSGIQIRNMERAWNKPVVDRVGLIIE 156

Query: 177 IFNAHAFTXXXXXXXXXXXXSFKKTXXXXXXXXXXXXTFGAHGETEVVXXXXXXXXXXXX 236
           IFNAHAFT            S+KK+            TFG  GE EVV            
Sbjct: 157 IFNAHAFTKEAKLQAELAALSYKKSRLVRVLGPNGRLTFGGSGEAEVVSARGRGSGGQGF 216

Query: 237 XXXXXETEXXXXXXXXXXXXXXXXTQIEEVRRTRALQRAGRKRHGGSLGQGLATVAVVGY 296
                ETE                TQIEEVRRTRA+QRAGRKR GGS  Q LAT+AVVGY
Sbjct: 217 MSGAGETELQLQRRRLLDRRNYLLTQIEEVRRTRAVQRAGRKRQGGSSAQRLATIAVVGY 276

Query: 297 TNAGKSTLVSECIVILGKVSFTVYLYAFTXXXXXXXXXXXXXHCRLFATVDPRVRSAVLP 356
           TNAGKSTLVS              LY+                CRLFATVDPR+RSAVLP
Sbjct: 277 TNAGKSTLVSNLT--------DSDLYS---------------DCRLFATVDPRLRSAVLP 313

Query: 357 SGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQVL 416
           SGRKVL SDTVGFISDLPV+LVEAFHATLEEVVEADLLVHVVDS+APNL+EHR+TVFQVL
Sbjct: 314 SGRKVLFSDTVGFISDLPVKLVEAFHATLEEVVEADLLVHVVDSTAPNLEEHRTTVFQVL 373

Query: 417 QQIGVSEEKLQNMIEVWNKIXXXXXXXXXXXXXXXXXXXXXXXXXXXTSMITAENEGTEE 476
           QQIGVS+EKLQNMIEVWNKI                              +  + E  E 
Sbjct: 374 QQIGVSQEKLQNMIEVWNKIDAEEEFTDVDENVD--------------EHLNEDEEADET 419

Query: 477 PEYVCERSLGDLEAVEEKEDYSDGWLY-EDTLVNEDDFCSPSSAADPQNESS-KDNVVEK 534
                E  +      EEKEDYSDGWLY EDT++NE DFC PSSAAD Q ESS KDN VE 
Sbjct: 420 SSIDGEEDVNIETLTEEKEDYSDGWLYEEDTVLNEGDFCLPSSAADQQIESSNKDNSVEN 479

Query: 535 YSSMGPPAPHVKTSAVMGVGLQELLELIDEKLSAQDKKLKGAQVVERNNIFHKKWRPSHT 594
             +M P +PHVKTSA+ GVGLQEL+ELIDEKLS+QD+KLKGAQVVER N+F +KWRPSHT
Sbjct: 480 AGAMLPSSPHVKTSAITGVGLQELMELIDEKLSSQDEKLKGAQVVER-NLFDRKWRPSHT 538

Query: 595 ENSSIAVE 602
           ++SSI VE
Sbjct: 539 QDSSIVVE 546


>Medtr1g022980.1 | GTP-binding protein HflX | HC |
           chr1:7275413-7268870 | 20130731
          Length = 545

 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 76/142 (53%), Gaps = 26/142 (18%)

Query: 295 GYTNAGKSTLVSECIVILGKVSFTVYLYAFTXXXXXXXXXXXXXHCRLFATVDPRVRSAV 354
           GYTNAGKSTL+++                                 +LFAT+DP  R   
Sbjct: 326 GYTNAGKSTLLNQL-----------------------TGADVLAEDKLFATLDPTTRRVQ 362

Query: 355 LPSGRKVLLSDTVGFISDLPVQLVEAFHATLEEVVEADLLVHVVDSSAPNLDEHRSTVFQ 414
           + +G++ LL+DTVGFI  LP  LV AF ATLEE+ E+ LLVHV+D S P  D+  + V +
Sbjct: 363 MKNGKEFLLTDTVGFIQKLPTTLVAAFRATLEEISESSLLVHVIDISHPLADQQINAVDK 422

Query: 415 VLQQIGVSEEKLQNMIEVWNKI 436
           VL ++ VS       + VWNKI
Sbjct: 423 VLSELDVSSIP---TLMVWNKI 441