Miyakogusa Predicted Gene
- Lj0g3v0102139.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0102139.1 tr|F2CTA3|F2CTA3_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,39.92,1e-18,seg,NULL,CUFF.5753.1
(1266 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC77029 similar to UniRef100_A7Q5P6 Cluster: Chromosome... 1907 0.0
gnl|LJGI|TC61535 similar to UniRef100_A7Q5P6 Cluster: Chromosome... 819 0.0
gnl|LJGI|FS346510 440 e-123
>gnl|LJGI|TC77029 similar to UniRef100_A7Q5P6 Cluster: Chromosome undetermined
scaffold_53, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_53, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(24%)
Length = 1196
Score = 1907 bits (962), Expect = 0.0
Identities = 977/982 (99%)
Strand = Plus / Plus
Query: 285 atcctctgtgtatagagacgttaacacatatcctgatatgccaatgctatctcatattca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 atcctctgtgtatagagacgttaacacatatcctgatatgccaatgctatctcatattca 64
Query: 345 ctctggagacgttgggtgtcagcctgtgcattctgggtatgaagtatccccctgtatggt 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 ctctggagacgttgggtgtcagcctgtgcattctgggtatgaagtatccccctgtatggt 124
Query: 405 gaatcctttgatgaactctgtggactcagtgaagcctcaaaccatgactcctcaggagaa 464
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 125 gaatcctttgatgaactctgtgggctcagtgaagcctcaaaccatgactcctcaggagaa 184
Query: 465 aattgaaaagttgaggaggcggcagcaaatccaggcaatgcttgctattcagaaacaaca 524
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aattgaaaagttgaggaggcggcagcaaatccaggcaatgcttgctattcagaaacaaca 244
Query: 525 gcaagagttaagccaccaagttcctagcactagtaaatccatcagcaaaaaatgtcctgc 584
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gcaagagttaagccaccaagttcctagcactagtaaatccatcagcaaaaaatgtcctgc 304
Query: 585 agaaattcaaagtcatctttgtgatgggactgatcctgaatttgatgatctaagaactct 644
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agaaattcaaagtcatctttgtgatgggactgatcctgaatttgatgatctaagaactct 364
Query: 645 ttctgctctagatctgccaattgagcaagatgattcaaatacaatatctctggccattga 704
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttctgccctagatctgccaattgagcaagatgattcaaatacaatatctctggccattga 424
Query: 705 taatgattttgttgaagagactgtgctaaacaggcttcaggatattatatcaaagttaga 764
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 taatggttttgttgaagagactgtgctaaacaggcttcaggatattatatcaaagttaga 484
Query: 765 catcagaataagactctgtatcagagatagcttattccggttggcacaaagtgcaatcca 824
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 catcagaataagactctgtatcagagatagcttattccggttggcacaaagtgcaatcca 544
Query: 825 aaggcattatgctagtgacttaagcagtgcaaacaagggtagcaaagaacttgaagtcat 884
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaggcattatgctagtgacttaagcagtgcaaacaagggtagcaaagaacttgaagtcat 604
Query: 885 tacaggagtagaaagaaatagccaaagcagacatgccaggaagcctgatgtcgaaacaga 944
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tacaggagtagaaagaaatagccaaagcagacatgccaggaagcctgatgtcgaaacaga 664
Query: 945 gacgaatcccattgatcgaacggtggctcacttgctttttcataggcctatagatttcac 1004
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gacgaatcccattgatcgaacggtggctcacttgctttttcataggcctatagatttcac 724
Query: 1005 cggaaattattctgacaaactggagtcacctagttctactaaggtgcagtgtgaaagcaa 1064
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 725 cggaaattattctgacaaactggagtcacctagttctactaaggtgcagtgtggaagcaa 784
Query: 1065 agcagctaacctggtgaacttccccgagacatgcttaccagaggaggacatgaaaagtaa 1124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 agcagctaacctggtgaacttccccgagacatgcttaccagaggaggacatgaaaagtaa 844
Query: 1125 tcgacaatttccccaccttgggttaaagaattcatggccatcatttgaggctcagcctat 1184
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 845 tcgacaatttccccaccttgggttaaagaattcatggccatcatttgaggctccgcctat 904
Query: 1185 ggatgaaaccaacaacagtccctgcagagacacttcagtgaatgcatctaatgcacagga 1244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 905 ggatgaaaccaacaacagtccctgcagagacacttcagtgaatgcatctaatgcacagga 964
Query: 1245 gctggaagcctctcaatgaaga 1266
||||||||||||||||||||||
Sbjct: 965 gctggaagcctctcaatgaaga 986
>gnl|LJGI|TC61535 similar to UniRef100_A7Q5P6 Cluster: Chromosome undetermined
scaffold_53, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_53, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(6%)
Length = 762
Score = 819 bits (413), Expect = 0.0
Identities = 413/413 (100%)
Strand = Plus / Plus
Query: 854 caaacaagggtagcaaagaacttgaagtcattacaggagtagaaagaaatagccaaagca 913
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caaacaagggtagcaaagaacttgaagtcattacaggagtagaaagaaatagccaaagca 60
Query: 914 gacatgccaggaagcctgatgtcgaaacagagacgaatcccattgatcgaacggtggctc 973
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gacatgccaggaagcctgatgtcgaaacagagacgaatcccattgatcgaacggtggctc 120
Query: 974 acttgctttttcataggcctatagatttcaccggaaattattctgacaaactggagtcac 1033
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 acttgctttttcataggcctatagatttcaccggaaattattctgacaaactggagtcac 180
Query: 1034 ctagttctactaaggtgcagtgtgaaagcaaagcagctaacctggtgaacttccccgaga 1093
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 ctagttctactaaggtgcagtgtgaaagcaaagcagctaacctggtgaacttccccgaga 240
Query: 1094 catgcttaccagaggaggacatgaaaagtaatcgacaatttccccaccttgggttaaaga 1153
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 catgcttaccagaggaggacatgaaaagtaatcgacaatttccccaccttgggttaaaga 300
Query: 1154 attcatggccatcatttgaggctcagcctatggatgaaaccaacaacagtccctgcagag 1213
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 attcatggccatcatttgaggctcagcctatggatgaaaccaacaacagtccctgcagag 360
Query: 1214 acacttcagtgaatgcatctaatgcacaggagctggaagcctctcaatgaaga 1266
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 acacttcagtgaatgcatctaatgcacaggagctggaagcctctcaatgaaga 413
>gnl|LJGI|FS346510
Length = 652
Score = 440 bits (222), Expect = e-123
Identities = 222/222 (100%)
Strand = Plus / Minus
Query: 1045 aaggtgcagtgtgaaagcaaagcagctaacctggtgaacttccccgagacatgcttacca 1104
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aaggtgcagtgtgaaagcaaagcagctaacctggtgaacttccccgagacatgcttacca 593
Query: 1105 gaggaggacatgaaaagtaatcgacaatttccccaccttgggttaaagaattcatggcca 1164
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 gaggaggacatgaaaagtaatcgacaatttccccaccttgggttaaagaattcatggcca 533
Query: 1165 tcatttgaggctcagcctatggatgaaaccaacaacagtccctgcagagacacttcagtg 1224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 532 tcatttgaggctcagcctatggatgaaaccaacaacagtccctgcagagacacttcagtg 473
Query: 1225 aatgcatctaatgcacaggagctggaagcctctcaatgaaga 1266
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aatgcatctaatgcacaggagctggaagcctctcaatgaaga 431