Miyakogusa Predicted Gene
- Lj0g3v0101059.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0101059.1 tr|D7KS42|D7KS42_ARALL IQ-domain 31
OS=Arabidopsis lyrata subsp. lyrata GN=IQD31 PE=4 SV=1,40,3e-18,IQ,IQ
motif, EF-hand binding site; DUF4005,Domain of unknown function
DUF4005; FAMILY NOT NAMED,NULL,CUFF.5711.1
(2499 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC66290 similar to UniRef100_A7NSY9 Cluster: Chromosome... 1838 0.0
gnl|LJGI|TC58847 weakly similar to UniRef100_Q9FXI5 Cluster: Pro... 1475 0.0
gnl|LJGI|BP066910 174 2e-42
gnl|LJGI|BI417667 similar to UniRef100_A7NSY9 Cluster: Chromosom... 165 2e-39
gnl|LJGI|FS343422 weakly similar to UniRef100_A7PEG2 Cluster: Ch... 72 2e-11
>gnl|LJGI|TC66290 similar to UniRef100_A7NSY9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (47%)
Length = 1438
Score = 1838 bits (927), Expect = 0.0
Identities = 941/948 (99%)
Strand = Plus / Plus
Query: 1552 tcaaaagagttcttctcaactaagaattctgcttctggtgtttccggagttggtggttct 1611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tcaaaagagttcttctcaactaagaattctgcttctggtgtttccggagttggtggttct 61
Query: 1612 gaatgtgggactgaactctctattacttcaaccctggattcacctgacagattagaggtt 1671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gaatgtgggactgaactctctattacttcaaccctggattcacctgacagattagaggtt 121
Query: 1672 gaaactatggaaaatcagcatgatgccaaagatttagtcaaagggataggtagtcctgaa 1731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gaaactatggaaaatcagcatgatgccaaagatttagtcaaagggataggtagtcctgaa 181
Query: 1732 aacaagatggatcatgttgttgaggataatattctgtgtgacactccaacttcaaactta 1791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 aacaagatggatcatgttgttgaggataatattctgtgtgacactccaacttcaaactta 241
Query: 1792 cctatctctgacttgaataaaatagaaccagtttatgctgccggcggtgatatggttgat 1851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cctatctctgacttgaataaaatagaaccagtttatgctgccggcggtgatatggttgat 301
Query: 1852 acagtggtggttggaaactccaaagagactgctgttgagcctgnnnnnnnttcatctgag 1911
||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 302 acagtggtggttggaaactccaaagagactgctgttgagcctgaaaaaaattcatctgag 361
Query: 1912 ctgtcaagagatcaacagacagaaactgttctgcaggatttcaagttgtctccaaaagct 1971
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 ctgtcaagagatcaacagacagaaactgttctgcaggatttcaagttgtctccaaaagct 421
Query: 1972 tcaccaggaagccatgtgaccatctctgaatctcaagaaacaccttcaagtcaggtatca 2031
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcaccaggaagccatgtgaccatctctgaatctcaagaaacaccttcaagtcaggtatca 481
Query: 2032 gtgaagtctaaagggagtaaaaccgacaagtctggatcaagcaatcggcgtagaaaactg 2091
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gtgaagtctaaagggagtaaaaccgacaagtctggatcaagcaatcggcgtagaaaactg 541
Query: 2092 tctgttggtaacaagtctcctgcaaatgcaaatcatgattcaggctcaagaggtagcaga 2151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 tctgttggtaacaagtctcctgcaaatgcaaatcatgattcaggctcaagaggtagcaga 601
Query: 2152 gaaccattgcctaaagatcagcagaacggaaagaggcgcagttccctcggctcagtaaaa 2211
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gaaccattgcctaaagatcagcagaacggaaagaggcgcagttccctcggctcagtaaaa 661
Query: 2212 cctgatcacgtggatcaagaacctagagataatagcagtaacaacaattctgttcctcgt 2271
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 cctgatcacgtggatcaagaacctagagataatagcagtaacaacaattctgttcctcgt 721
Query: 2272 tttatgcttgctacagaatctgctaaggccaagataagtgcgaattattctccaagatca 2331
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 722 tttatgcttgctacagaatctgctaaggccaagataagtgcgaattattctccaagatca 781
Query: 2332 agtccagatgtacatgagcaagacattcatgttaagaagagacattccttacctggtgcc 2391
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 782 agtccagatgtacatgagcaagacattcatgttaagaagagacattccttacctggtgcc 841
Query: 2392 actggtaagcagggttctccccgcgtccaacattcaccagctgaagctcagcagggtaca 2451
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 actggtaagcagggttctccccgcgtccaacattcaccagctgaagctcagcagggtaca 901
Query: 2452 aagggaaacggcatacataatcttcatgagagaaaatggctgaggtga 2499
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 902 aagggaaacggcatacataatcttcatgagagaaaatggctgaggtga 949
>gnl|LJGI|TC58847 weakly similar to UniRef100_Q9FXI5 Cluster: Protein IQ-DOMAIN 32;
n=1; Arabidopsis thaliana|Rep: Protein IQ-DOMAIN 32 -
Arabidopsis thaliana (Mouse-ear cress), partial (11%)
Length = 814
Score = 1475 bits (744), Expect = 0.0
Identities = 744/744 (100%)
Strand = Plus / Plus
Query: 1 atggtgaaatctagctcctgcttgagattaatcacatgcggcggtggtgcggcggagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71 atggtgaaatctagctcctgcttgagattaatcacatgcggcggtggtgcggcggagaaa 130
Query: 61 aatgattaccaaccagtatcggagatcaaagattctaatgataaaagtggttggagtttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 aatgattaccaaccagtatcggagatcaaagattctaatgataaaagtggttggagtttt 190
Query: 121 cgcaagagatctgcaaggcatcgcgtgcttagcaatactgtgataacagagaccccatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 cgcaagagatctgcaaggcatcgcgtgcttagcaatactgtgataacagagaccccatct 250
Query: 181 tccgcaaataaagagacttcagaatgtaaaagtattaattttcaaccactggaacctaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 tccgcaaataaagagacttcagaatgtaaaagtattaattttcaaccactggaacctaag 310
Query: 241 gagacttcagaatgtaccagtattaatgttcaaccacaggaacctaatgttgctgagaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 gagacttcagaatgtaccagtattaatgttcaaccacaggaacctaatgttgctgagaag 370
Query: 301 aataacacaacaaatttctccgatgaaaagccccaattaacctctaatgttgctgagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 aataacacaacaaatttctccgatgaaaagccccaattaacctctaatgttgctgagaag 430
Query: 361 aataacacaacagatttctccgatgaaaagccccaattaacctctattgaaaggtccgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 431 aataacacaacagatttctccgatgaaaagccccaattaacctctattgaaaggtccgag 490
Query: 421 ttgtctgaaacaattgtcactgaaactgagtgtaaggtggatgtcagtgtgccagaatct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ttgtctgaaacaattgtcactgaaactgagtgtaaggtggatgtcagtgtgccagaatct 550
Query: 481 gttgtaatcattctccaagctgccattagaggattcttggctcagagagcactgctgaag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gttgtaatcattctccaagctgccattagaggattcttggctcagagagcactgctgaag 610
Query: 541 agtaagaatgtagtgaagttgcaagctgcttttcgcgggcacttggaaaggaggcacgct 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 agtaagaatgtagtgaagttgcaagctgcttttcgcgggcacttggaaaggaggcacgct 670
Query: 601 gtaggaacactgcgatgtgttcaagctattgttaaaatgcaacttctcgtgcgagctcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gtaggaacactgcgatgtgttcaagctattgttaaaatgcaacttctcgtgcgagctcga 730
Query: 661 catgctcaacagtcacattcagatgttcatttaaatcacaaggatggcaaaaacgattca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 catgctcaacagtcacattcagatgttcatttaaatcacaaggatggcaaaaacgattca 790
Query: 721 aaatcggctcgtgaccagcatgtg 744
||||||||||||||||||||||||
Sbjct: 791 aaatcggctcgtgaccagcatgtg 814
>gnl|LJGI|BP066910
Length = 437
Score = 174 bits (88), Expect = 2e-42
Identities = 109/112 (97%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 6 gaaatctagctcctgcttgagattaatcacatgcggcggtg-gtgcggcggagaaaaatg 64
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 1 gaaatctagctcctgcttgagattaatcacatgcggcggtgtgtgcggcggagaaaaatg 60
Query: 65 attaccaaccagtatcggagatcaaagattctaa-tgataaaa-gtggttgg 114
|||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 61 attaccaaccagtatcggagatcaaagattctaantgataaaacgtggttgg 112
Score = 87.7 bits (44), Expect = 3e-16
Identities = 51/52 (98%), Gaps = 1/52 (1%)
Strand = Plus / Plus
Query: 341 cctctaatgtt-gctgagaagaataacacaacagatttctccgatgaaaagc 391
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 cctctaatgtttgctgagaagaataacacaacagatttctccgatgaaaagc 437
Score = 75.8 bits (38), Expect = 1e-12
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 290 ttgctgagaagaataacacaacaaatttctccgatgaaaagc 331
||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 396 ttgctgagaagaataacacaacagatttctccgatgaaaagc 437
>gnl|LJGI|BI417667 similar to UniRef100_A7NSY9 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (28%)
Length = 531
Score = 165 bits (83), Expect = 2e-39
Identities = 259/317 (81%), Gaps = 3/317 (0%)
Strand = Plus / Plus
Query: 2098 ggtaacaagtctcctgcaaatgcaaatcatgattcaggctcaagaggtagcagagaacca 2157
|||||||| || ||||| ||||||||||||||||||||||||||||| || | || | |
Sbjct: 105 ggtaacaactcacctgccaatgcaaatcatgattcaggctcaagaggcagtggggagcaa 164
Query: 2158 ttgcctaaagatcagcagaacg---gaaagaggcgcagttccctcggctcagtaaaacct 2214
||||||||||||||| || | | ||||| || | |||| | |||||||||||||||
Sbjct: 165 ctgcctaaagatcagcgcaatgatgggaagagacggaattcctttggctcagtaaaacct 224
Query: 2215 gatcacgtggatcaagaacctagagataatagcagtaacaacaattctgttcctcgtttt 2274
|||||| | ||||||||||||| |||||||| |||| ||| |||||| ||||||||||
Sbjct: 225 gatcacattgatcaagaacctaaagataatactagtagcaataattctcttcctcgtttc 284
Query: 2275 atgcttgctacagaatctgctaaggccaagataagtgcgaattattctccaagatcaagt 2334
|||| |||||| | ||||||| |||||| | | ||| ||| | |||||||||||||||
Sbjct: 285 atgcaagctacacagtctgctagggccaaactcaatgcaaataactctccaagatcaagt 344
Query: 2335 ccagatgtacatgagcaagacattcatgttaagaagagacattccttacctggtgccact 2394
|||||||| ||||| ||| | || |||| ||||||||||||||||||||| ||||
Sbjct: 345 ccagatgtgcatgaaggagatgtccaagttataaagagacattccttacctggttccaca 404
Query: 2395 ggtaagcagggttctcc 2411
|| | ||||| ||||||
Sbjct: 405 ggcaggcaggtttctcc 421
>gnl|LJGI|FS343422 weakly similar to UniRef100_A7PEG2 Cluster: Chromosome chr11
scaffold_13, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr11 scaffold_13, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (6%)
Length = 757
Score = 71.9 bits (36), Expect = 2e-11
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 91 gattctaatgataaaagtggttggagttttcgcaagagatctgcaaggcatcgcgtgctt 150
||||||| |||||| ||||||||||||| ||||||| |||| ||| |||||| ||||||
Sbjct: 219 gattctactgataagcgtggttggagtttccgcaagaaatcttcaacgcatcgtgtgctt 278
Query: 151 agcaatac 158
||||||||
Sbjct: 279 agcaatac 286
Score = 54.0 bits (27), Expect = 4e-06
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 520 gctcagagagcactgctgaagagtaagaatgtagtgaagttgcaagctgcttttcgcggg 579
|||||||||| ||||||| || | ||| | ||||||||||||||| |||| ||||||||
Sbjct: 486 gctcagagagaactgctgcaggttgagagtatagtgaagttgcaaggtgctgttcgcggg 545
Query: 580 cacttgg 586
||||||
Sbjct: 546 tacttgg 552