Miyakogusa Predicted Gene

Lj0g3v0096159.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096159.1 tr|Q4S3K6|Q4S3K6_TETNG Chromosome 1 SCAF14749,
whole genome shotgun sequence. (Fragment)
OS=Tetraodo,27.16,1e-18,Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold; SUBFAMILY NOT NAMED,NU,CUFF.5355.1
         (261 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g007120.1 | thioredoxin-related transmembrane protein, put...   354   4e-98

>Medtr1g007120.1 | thioredoxin-related transmembrane protein,
           putative | HC | chr1:184125-190492 | 20130731
          Length = 265

 Score =  354 bits (909), Expect = 4e-98,   Method: Compositional matrix adjust.
 Identities = 198/262 (75%), Positives = 218/262 (83%), Gaps = 1/262 (0%)

Query: 1   MGKENSSV-LPVLQWLNRVVSEPHYLLHFLTFFSYFVIRCSATXXXXXXXXXXXXQREIQ 59
           M KENSS  + VL+ LN+ VSEPH+L HFLTFFSY V+RCSA+            +REIQ
Sbjct: 1   MSKENSSNNIQVLKLLNQTVSEPHFLFHFLTFFSYLVLRCSASQVLAPNLTQNLLRREIQ 60

Query: 60  TLLVFAVLALIKGVREETWEAFIADALFLAKICIFVLAFTMDRRLAIWYVLVFLVMHMLT 119
           TLL FAVLA IKGVREETWEAFI DALFLAKIC+F L FTMDRR+A+ Y+LVF V+H+LT
Sbjct: 61  TLLAFAVLAFIKGVREETWEAFIGDALFLAKICLFALTFTMDRRIAVSYILVFAVIHVLT 120

Query: 120 QQPPFQGLGTSSKLTPLQLESLLTEGNTTRLWLVEFCASYSSGCIRSSQQFPELSITYSS 179
           QQPP + LG  SKLTPL LESLLTEG TTR WLVEF ASYSS CIRSSQQFPELSITYSS
Sbjct: 121 QQPPSEALGACSKLTPLLLESLLTEGTTTRYWLVEFSASYSSACIRSSQQFPELSITYSS 180

Query: 180 KILSFGIVDLGLFPNAAEKFGISLSGCMGQLPTYILFDNATEVARFPELDFETTFFHPTV 239
           KILSFGIVDLGLFPNAAEKFG+SLSG MGQLPT+ILFDNA EVARFP L  ETTFF+PT+
Sbjct: 181 KILSFGIVDLGLFPNAAEKFGVSLSGSMGQLPTFILFDNAAEVARFPVLGSETTFFNPTI 240

Query: 240 TKGLLSRHFDLDRSLLEYFNVK 261
           TKGLLSRHF+LDR LLEY + K
Sbjct: 241 TKGLLSRHFELDRHLLEYISGK 262