Miyakogusa Predicted Gene

Lj0g3v0096159.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096159.1 tr|Q4S3K6|Q4S3K6_TETNG Chromosome 1 SCAF14749,
whole genome shotgun sequence. (Fragment)
OS=Tetraodo,27.16,1e-18,Thioredoxin-like,Thioredoxin-like fold; no
description,Thioredoxin-like fold; SUBFAMILY NOT NAMED,NU,CUFF.5355.1
         (261 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G11640.1 | Symbols:  | Thioredoxin superfamily protein | chr5...   277   6e-75

>AT5G11640.1 | Symbols:  | Thioredoxin superfamily protein |
           chr5:3742008-3743703 FORWARD LENGTH=253
          Length = 253

 Score =  277 bits (708), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 136/249 (54%), Positives = 178/249 (71%), Gaps = 5/249 (2%)

Query: 11  VLQWLNRVVSEPHYLLHFLTFFSYFVIRCSATXXXXXXXXXXXXQREIQTLLVFAVLALI 70
           V++ ++R+VS+P+Y LHF+ FFSY  IR SA              REIQ  L F + + I
Sbjct: 8   VIEGMSRIVSDPYYFLHFMAFFSYLPIRSSAAPYTSHRLF----DREIQAFLAFLMFSAI 63

Query: 71  KGVREETWEAFIADALFLAKICIFVLAFTMDRRLAIWYVLVFLVMHMLTQQPPFQGLGTS 130
           K VREETWEAF+AD+L  AKI +  ++  MD R+A+W+ ++F V+++L QQP F  LGT+
Sbjct: 64  KMVREETWEAFVADSLLYAKIFLIAVSLIMDYRVAVWFSIIFSVIYLLAQQPAFSKLGTA 123

Query: 131 SKLTPLQLESLLTEGNTTRLWLVEFCASYSSGCIRSSQQFPELSITYSSKILSFGIVDLG 190
            KLTP+QLE LL++GNTT+ WL+EF A  SS C+RSS+ FPELSITYS+ +LSFG VDLG
Sbjct: 124 KKLTPMQLEDLLSDGNTTKYWLIEFFACSSSKCVRSSRCFPELSITYSNNLLSFGTVDLG 183

Query: 191 LFPNAAEKFGISLSGCMGQLPTYILFDNATEVARFPELDFETTFFHPTVTKGLLSRHFDL 250
           LFPN A KFGISL+G M QLPTYILF+   EV+RFP+   +     P +TK LL +HF+L
Sbjct: 184 LFPNTAAKFGISLAGGMSQLPTYILFEKGVEVSRFPDFYVDAAPSLP-ITKKLLCQHFEL 242

Query: 251 DRSLLEYFN 259
           DR LL+Y N
Sbjct: 243 DRLLLDYIN 251