Miyakogusa Predicted Gene

Lj0g3v0096059.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0096059.1 Non Chatacterized Hit- tr|D8SKT2|D8SKT2_SELML
Putative uncharacterized protein OS=Selaginella
moelle,40.94,3e-18,RAB3-GAP REGULATORY DOMAIN,Rab3-GAP regulatory
subunit,CUFF.5363.1
         (128 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g32870.1                                                       206   5e-54
Glyma12g18240.1                                                       204   2e-53

>Glyma06g32870.1 
          Length = 460

 Score =  206 bits (524), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 111/128 (86%), Gaps = 1/128 (0%)

Query: 1   MTGVIARFDSSDIQNMLQKWFEESQSQLWNQKPKREDSEDFEHSHVKLPYQVWNVGKYGT 60
           M+GVIARFD SDIQNMLQKWFEE+ S+  +Q PK +DSEDFE++ VK+PYQ+WN+GKYGT
Sbjct: 151 MSGVIARFDGSDIQNMLQKWFEEANSRFSDQNPKSQDSEDFENTDVKIPYQLWNIGKYGT 210

Query: 61  CADAAITGIMPPPLME-QQSSQRYYCAVAVGEDAVISAYRLSEEKGRSLGGAILSKGVPC 119
           CADAAITGIMPPPLME QQS+QRYYCAVAVGEDAVISAYRLSE KGRSL GAILSK VP 
Sbjct: 211 CADAAITGIMPPPLMEQQQSNQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 270

Query: 120 SIFHSSFF 127
           +    S F
Sbjct: 271 TFSTISSF 278


>Glyma12g18240.1 
          Length = 304

 Score =  204 bits (519), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 99/128 (77%), Positives = 109/128 (85%), Gaps = 1/128 (0%)

Query: 1   MTGVIARFDSSDIQNMLQKWFEESQSQLWNQKPKREDSEDFEHSHVKLPYQVWNVGKYGT 60
           M+GVIA FD SDIQNMLQKWFEES S+ W+Q PK  DSEDF ++ VK+PYQ+WN+GKYGT
Sbjct: 150 MSGVIAHFDGSDIQNMLQKWFEESHSRFWDQNPKSHDSEDFGNTDVKIPYQLWNIGKYGT 209

Query: 61  CADAAITGIMPPPLME-QQSSQRYYCAVAVGEDAVISAYRLSEEKGRSLGGAILSKGVPC 119
           CA+AAITGIMPPPLME QQSSQRYYCAVAVGEDAVISAYRLSE KGRSL GAILSK VP 
Sbjct: 210 CAEAAITGIMPPPLMEQQQSSQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPA 269

Query: 120 SIFHSSFF 127
           +    S F
Sbjct: 270 TFSTISSF 277