Miyakogusa Predicted Gene

Lj0g3v0094069.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0094069.1 Non Chatacterized Hit- tr|E0W264|E0W264_PEDHC
Serine/threonine-protein kinase MRCK beta, putative
OS,32.2,0.59,seg,NULL,CUFF.5187.1
         (328 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC70582 similar to UniRef100_Q4S9L1 Cluster: Chromosome...   311   1e-84
gnl|LJGI|TC75551                                                       76   1e-13

>gnl|LJGI|TC70582 similar to UniRef100_Q4S9L1 Cluster: Chromosome undetermined
           SCAF14696, whole genome shotgun sequence; n=1; Tetraodon
           nigroviridis|Rep: Chromosome undetermined SCAF14696,
           whole genome shotgun sequence - Tetraodon nigroviridis
           (Green puffer), partial (9%)
          Length = 548

 Score =  311 bits (157), Expect = 1e-84
 Identities = 179/185 (96%), Gaps = 1/185 (0%)
 Strand = Plus / Plus

                                                                       
Query: 145 gatacagcaacaagagttatcaccatcaccatgtttcccttctccctctcacaccatcca 204
           |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 87  gatacagcaacaagagttatcaccatcaccatgtttcccttctccctctcacgccagcca 146

                                                                       
Query: 205 ccaccgcaccctcctcacgcgagcccgcagccaaccaccgccaccaccgcgagccaaaac 264
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 ccaccgcgccctcctcacgcgagcccgcagccaaccaccgccaccaccgcgagccaaaac 206

                                                                       
Query: 265 gccaccaccacgcgttttt-ctcctctggttcctcaaccacgaccagcaccagtaccacc 323
           ||||||||||||||||||| ||||||||||||||||||||| ||||||||||||| ||||
Sbjct: 207 gccaccaccacgcgtttttcctcctctggttcctcaaccactaccagcaccagtatcacc 266

                
Query: 324 gtgag 328
           |||||
Sbjct: 267 gtgag 271


>gnl|LJGI|TC75551 
          Length = 992

 Score = 75.8 bits (38), Expect = 1e-13
 Identities = 53/58 (91%)
 Strand = Plus / Plus

                                                                     
Query: 234 gccaaccaccgccaccaccgcgagccaaaacgccaccaccacgcgtttttctcctctg 291
           ||||||||||||||||||||||  |||||||||| ||||||||| |||| ||||||||
Sbjct: 147 gccaaccaccgccaccaccgcgtcccaaaacgccgccaccacgcattttcctcctctg 204