Miyakogusa Predicted Gene
- Lj0g3v0092709.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0092709.1 tr|I1MYR5|I1MYR5_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.55503 PE=3
SV=1,95.92,0,UCH,Peptidase C19, ubiquitin carboxyl-terminal hydrolase
2; UCH_2_3,Peptidase C19, ubiquitin carboxy,CUFF.5092.1
(368 letters)
Database: TAIR10_pep
35,386 sequences; 14,482,855 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific proteas... 672 0.0
AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific proteas... 667 0.0
AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 | ch... 658 0.0
AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 | ... 135 3e-32
AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 | ... 131 7e-31
AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 | ... 129 3e-30
AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 | ... 123 2e-28
AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 | ... 118 7e-27
AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 116 2e-26
AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 | ... 116 2e-26
AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 116 3e-26
AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 | ... 115 3e-26
AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specifi... 110 1e-24
AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 | ... 110 2e-24
AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 | ... 106 2e-23
AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 98 7e-21
AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 98 7e-21
AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 | ... 98 7e-21
AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 92 8e-19
AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 | ... 91 9e-19
AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 | ... 91 1e-18
AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 89 3e-18
AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 89 4e-18
AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 | ... 89 4e-18
AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific... 76 4e-14
AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 75 5e-14
AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 | ch... 75 5e-14
AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 75 7e-14
AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 | ... 75 7e-14
AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 | ch... 75 1e-13
AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 | ... 72 9e-13
AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific proteas... 61 1e-09
AT4G39370.3 | Symbols: UBP27 | ubiquitin-specific protease 27 | ... 55 8e-08
AT4G39370.2 | Symbols: UBP27 | ubiquitin-specific protease 27 | ... 55 8e-08
AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 | ... 55 9e-08
AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific proteas... 55 9e-08
>AT4G39910.1 | Symbols: ATUBP3, UBP3 | ubiquitin-specific protease 3
| chr4:18511858-18514139 REVERSE LENGTH=371
Length = 371
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 328/368 (89%), Positives = 345/368 (93%), Gaps = 3/368 (0%)
Query: 1 MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFCVPFREQLLEYY +NKS
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKS 60
Query: 61 ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
+ DAEENL+TCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 61 VADAEENLMTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 120
Query: 121 LNELVDILEKEAQFAKNDQETSPPS--EKIANGPKNGLANGGVKKEPLVTWVHKNFQGIL 178
LNE+VDILEKEA+ K + ETS S EKIANG K ANG V KEP+VTWVH FQGIL
Sbjct: 121 LNEVVDILEKEAKATKTEHETSSSSSPEKIANGLKVPQANGVVHKEPIVTWVHNIFQGIL 180
Query: 179 TNETKCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQ 238
TNET+CL+CETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQ
Sbjct: 181 TNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQ 240
Query: 239 EAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSDTVEE-ADIEYSL 297
EAQKRMKIKKPPHILVIHLKRFKY+EQLGRYKKLSYRVVFPLEL+LS+TVE AD+EYSL
Sbjct: 241 EAQKRMKIKKPPHILVIHLKRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSL 300
Query: 298 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGY 357
FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMI+ESAVQTFFGSSQEYSSNTDHGY
Sbjct: 301 FAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIEESAVQTFFGSSQEYSSNTDHGY 360
Query: 358 ILFYESVG 365
ILFYES+G
Sbjct: 361 ILFYESLG 368
>AT2G22310.1 | Symbols: ATUBP4, UBP4 | ubiquitin-specific protease 4
| chr2:9476733-9478825 REVERSE LENGTH=365
Length = 365
Score = 667 bits (1721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/367 (88%), Positives = 342/367 (93%), Gaps = 4/367 (1%)
Query: 1 MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKS 60
MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQALYFC PFREQLLE+Y NNK+
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQALYFCAPFREQLLEHYANNKA 60
Query: 61 ITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFL 120
DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLN+L
Sbjct: 61 --DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYL 118
Query: 121 LNELVDILEKEAQFAKNDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTN 180
LNELV+ILEKE Q K D ETS EKIAN K LANG V KEP+VTWVHK FQGILTN
Sbjct: 119 LNELVEILEKETQATKADNETSSSPEKIANVLKAPLANG-VHKEPIVTWVHKIFQGILTN 177
Query: 181 ETKCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEA 240
ET+CL+CETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AEDKFFCDKCCSLQEA
Sbjct: 178 ETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEA 237
Query: 241 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSDTVEE-ADIEYSLFA 299
QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLEL+LS+TV+E DIEYSLFA
Sbjct: 238 QKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLFA 297
Query: 300 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYIL 359
VVVHVGSGPNHGHYVSLVKSHNHWLFFDDE+VE+I+ESAVQTFFGSSQEYSSNTDHGYIL
Sbjct: 298 VVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGSSQEYSSNTDHGYIL 357
Query: 360 FYESVGS 366
YES+G+
Sbjct: 358 LYESLGT 364
>AT2G22310.2 | Symbols: UBP4 | ubiquitin-specific protease 4 |
chr2:9476733-9478825 REVERSE LENGTH=379
Length = 379
Score = 658 bits (1697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/381 (85%), Positives = 342/381 (89%), Gaps = 18/381 (4%)
Query: 1 MGATGSKLEKALGDQFPEGERYFGLENFGNTCYCNSVLQ--------------ALYFCVP 46
MGA GSKLEKALGDQFPEGERYFG ENFGNTCYCNSVLQ ALYFC P
Sbjct: 1 MGAAGSKLEKALGDQFPEGERYFGFENFGNTCYCNSVLQDWVVDLRSVLHSMFALYFCAP 60
Query: 47 FREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFR 106
FREQLLE+Y NNK+ DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFR
Sbjct: 61 FREQLLEHYANNKA--DAEENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFR 118
Query: 107 SYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETSPPSEKIANGPKNGLANGGVKKEPL 166
SYMHQDAHEFLN+LLNELV+ILEKE Q K D ETS EKIAN K LANG V KEP+
Sbjct: 119 SYMHQDAHEFLNYLLNELVEILEKETQATKADNETSSSPEKIANVLKAPLANG-VHKEPI 177
Query: 167 VTWVHKNFQGILTNETKCLQCETVTARDETFFDLSLDIEQNSSITSCLKNFSSTETLNAE 226
VTWVHK FQGILTNET+CL+CETVTARDETF DLSLDIEQNSSITSCLKNFSSTETL+AE
Sbjct: 178 VTWVHKIFQGILTNETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAE 237
Query: 227 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSD 286
DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLEL+LS+
Sbjct: 238 DKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSN 297
Query: 287 TVEE-ADIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGS 345
TV+E DIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDE+VE+I+ESAVQTFFGS
Sbjct: 298 TVDEYVDIEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDESVEIIEESAVQTFFGS 357
Query: 346 SQEYSSNTDHGYILFYESVGS 366
SQEYSSNTDHGYIL YES+G+
Sbjct: 358 SQEYSSNTDHGYILLYESLGT 378
>AT4G24560.1 | Symbols: UBP16 | ubiquitin-specific protease 16 |
chr4:12679493-12684528 REVERSE LENGTH=1008
Length = 1008
Score = 135 bits (341), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 166/345 (48%), Gaps = 50/345 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQ-ISSQ 82
GL N GN+C+ N V Q L F P L+ + ++++ T E+ C F + +
Sbjct: 543 GLINVGNSCFANVVFQCLMFTPPLTTYFLQQF-HSRACTKKEQ----CFTCGFEKLVVKA 597
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETS 142
K++ ++P + +L+ + +DAHEFL F+++ + + K +++
Sbjct: 598 KEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVDTMQSVCIKASEYDMTK---- 653
Query: 143 PPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSL 202
S K+ + T + F G L ++ KC++C+ + E DL++
Sbjct: 654 --SSKLED----------------TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTV 695
Query: 203 DIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
+I+ + S++ L+ F+ TE L+ E+K+ C C S + A+K++KI +PP++L I LKRF
Sbjct: 696 EIDGDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRF- 754
Query: 262 YMEQLGRYKKLSYRVVFPLELRLSDTV---EEADIEYSLFAVVVH--VGSGPNHGHYVSL 316
Q G++ KL+ + FP L L+ V E +Y L+ V+VH V + GHYV
Sbjct: 755 ---QAGKFGKLNKLIRFPETLDLAPYVSGGSEKSHDYKLYGVIVHLDVMNAAFSGHYVCY 811
Query: 317 VKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 361
+++ N W DD V D V+ T Y+LFY
Sbjct: 812 IRNQNKWYKADDSTVVTSD---VERIL---------TKGAYMLFY 844
>AT5G57990.1 | Symbols: UBP23 | ubiquitin-specific protease 23 |
chr5:23470218-23473997 REVERSE LENGTH=859
Length = 859
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 99/344 (28%), Positives = 164/344 (47%), Gaps = 50/344 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL+N GNTC+ NSVLQ L + P L+ + K A L + + + +
Sbjct: 108 GLQNLGNTCFLNSVLQCLTYTEPL-AATLQTAAHQKYCHVAG---FCALCAIQKHVRTAR 163
Query: 84 KKTG-VIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETS 142
+ G ++APK V L+ + FR+ +DAHE++ +++LE K +
Sbjct: 164 QANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYM-------INLLE---CMHKCSLPSG 213
Query: 143 PPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSL 202
PSE ++ ++ + VHK F G L ++ KC QC + + + F DLSL
Sbjct: 214 VPSE----------SSDAYRR----SLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSL 259
Query: 203 DIEQNSSITSCLKNFSSTETLNAEDKFF-CDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
DI + S+ L F++ E L+ K + C++C +A+K++ + K P++L +HLKRF
Sbjct: 260 DISKADSLQRALSRFTAVELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRF- 318
Query: 262 YMEQLGRYKKLSYRVVFPLELRLSDTVE---EADIEYSLFAVVVHVGSGPNHGHYVSLVK 318
+ R +K+ +V F + + V E +++Y+L+ V+VH G + GHY V+
Sbjct: 319 ---EAHRSEKIDRKVDFTSAIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVR 375
Query: 319 -SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 361
S W DD V + E +T F Y+LFY
Sbjct: 376 TSSGMWYSLDDNRVVQVSE---KTVFN---------QKAYMLFY 407
>AT3G14400.1 | Symbols: UBP25 | ubiquitin-specific protease 25 |
chr3:4811953-4815210 REVERSE LENGTH=661
Length = 661
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/336 (30%), Positives = 153/336 (45%), Gaps = 32/336 (9%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSIT--DAEENLLTCLADLFSQIS 80
GL N GNTCY NSVLQ L F P L + ++ T D E + +I+
Sbjct: 24 LGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRDCPFCIVEKRIA 83
Query: 81 -SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQ 139
S AP + LK E F+ +DAHEFL ++++ + + + N
Sbjct: 84 RSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGN 143
Query: 140 ETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFD 199
E P NG + V + F G L ++ KCL C + + + D
Sbjct: 144 E-----------PFNG-----------NSVVKEIFGGALQSQVKCLSCGAESNKADEIMD 181
Query: 200 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 259
+SL+I Q+SS+ L+ F +E L+ +K+ C+ C L A+K+M I + P+ILVI LKR
Sbjct: 182 ISLEILQSSSVKESLQKFFQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKR 241
Query: 260 FKYMEQLGRYKKLSYRVVFPLELRLSDTVEEADIEYSLFAVVVHVGSGPNHGHYVSLVK- 318
F + K +S+ + L +S ++ EY LF ++VH G P GHY + VK
Sbjct: 242 FGGIFGGKIDKAISFGEILVLSNFMSKASKDPQPEYKLFGIIVHSGFSPESGHYYAYVKD 301
Query: 319 SHNHWLFFDDENV------EMIDESAVQTFFGSSQE 348
S W +D V E++ E A FF S +
Sbjct: 302 SLGRWYCCNDSFVSLSTLQEVLSEKAYILFFSRSNQ 337
>AT5G65450.1 | Symbols: UBP17 | ubiquitin-specific protease 17 |
chr5:26157863-26161096 FORWARD LENGTH=731
Length = 731
Score = 123 bits (309), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/317 (29%), Positives = 150/317 (47%), Gaps = 41/317 (12%)
Query: 23 FGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQ 82
FGL N GN+CY N+VLQ L F P L+ G + + C + I
Sbjct: 329 FGLVNLGNSCYANAVLQCLAFTRPLISYLIR--GLHSKTCRKKSWCFVC--EFEHLILKA 384
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETS 142
+ ++P + + +L+K + +DAHEFL ++ + + KEA A
Sbjct: 385 RGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAA------G 438
Query: 143 PPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSL 202
P +E+ T V F G L ++ KC+ C + R E DL++
Sbjct: 439 PFAEE-------------------TTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTV 479
Query: 203 DIEQN-SSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
+I+ + S+ L F++ E L+ E+++FC +C S Q+A+K++ I + P+IL + LKRF
Sbjct: 480 EIDGDIGSLEEALAQFTAYEVLDGENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRF- 538
Query: 262 YMEQLGRYKKLSYRVVFPLELRLSDTVEEAD----IEYSLFAVVVHVGSGPN--HGHYVS 315
Q + KLS + FP L +S + + + YSL+AVVVH+ + GHYV
Sbjct: 539 ---QSDNFGKLSKPIHFPELLDISPYMSDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVC 595
Query: 316 LVKS-HNHWLFFDDENV 331
+K+ W DD NV
Sbjct: 596 YIKTLDGDWFKIDDSNV 612
>AT4G31670.1 | Symbols: UBP18 | ubiquitin-specific protease 18 |
chr4:15336007-15339506 REVERSE LENGTH=631
Length = 631
Score = 118 bits (295), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 150/320 (46%), Gaps = 39/320 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL N GN+C+ N +LQ L + P LLE G+ + + N L + + +
Sbjct: 169 GLMNCGNSCFANVILQCLSWTRPLVAYLLEK-GHKR---ECMRNDWCFLCEFQTHVERAS 224
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETSP 143
+ +P + RL +DAHEF+ + ++ + + E ++ P
Sbjct: 225 QSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEF----GGEKIVP 280
Query: 144 PSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSLD 203
P + T + F G+L ++ +C C V+ + E DL ++
Sbjct: 281 P------------------RSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVE 322
Query: 204 IEQNS-SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 262
+ ++ S+ CL F++ E L+ ++ + CD+C +A KR+ I++ P+IL I LKR+
Sbjct: 323 MHGDAGSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRY-- 380
Query: 263 MEQLGRYKKLSYRVVFPLELRLSDTVEE----ADIEYSLFAVVVHVG--SGPNHGHYVSL 316
Q GRY KL+ R+ FP L L+ + E +D+ Y L+AV+VH+ + GHY+
Sbjct: 381 --QGGRYGKLNKRISFPETLDLNPYMSEGGDGSDV-YKLYAVIVHLDMLNASFFGHYICY 437
Query: 317 VKSH-NHWLFFDDENVEMID 335
+K +W DD +E ++
Sbjct: 438 IKDFCGNWYRIDDSEIESVE 457
>AT1G17110.2 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=928
Length = 928
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 57/349 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL N GN+CY N+VLQ+L P LL +++S + + L+ +L + +
Sbjct: 443 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRR-SHSRSCSGKDWCLM---CELEQHVMMLR 498
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI-LEKEAQFAKND---Q 139
+ G ++ R + ++ N +DAHEFL L+ + I LE+ K D Q
Sbjct: 499 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 558
Query: 140 ETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFD 199
ET T V F G L ++ KCL+C+ + R E D
Sbjct: 559 ET--------------------------TLVQHMFGGRLRSKVKCLRCDHESERYENIMD 592
Query: 200 LSLDI-EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLK 258
L+L+I S+ L F+ E L+ E+ + C +C A+K + I + P+IL I LK
Sbjct: 593 LTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLK 652
Query: 259 RFKYMEQLGRYKKLSYRVVFPLELRLSD-TVEEADIE--YSLFAVVVHVGS--GPNHGHY 313
RF Q GRY K++ + FP L + D+ Y L+AV+VH+ + GHY
Sbjct: 653 RF----QEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHY 708
Query: 314 VSLVKS-HNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 361
+S VK +W DD + + + V ++ Y+LFY
Sbjct: 709 ISYVKDLRGNWYRIDDSEIHPVPMTQVM------------SEGAYMLFY 745
>AT1G17110.1 | Symbols: UBP15 | ubiquitin-specific protease 15 |
chr1:5845816-5849889 REVERSE LENGTH=924
Length = 924
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 155/349 (44%), Gaps = 57/349 (16%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL N GN+CY N+VLQ+L P LL +++S + + L+ +L + +
Sbjct: 439 GLVNCGNSCYANAVLQSLTCTKPLVAYLLRR-SHSRSCSGKDWCLM---CELEQHVMMLR 494
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDI-LEKEAQFAKND---Q 139
+ G ++ R + ++ N +DAHEFL L+ + I LE+ K D Q
Sbjct: 495 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 554
Query: 140 ETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFD 199
ET T V F G L ++ KCL+C+ + R E D
Sbjct: 555 ET--------------------------TLVQHMFGGRLRSKVKCLRCDHESERYENIMD 588
Query: 200 LSLDI-EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLK 258
L+L+I S+ L F+ E L+ E+ + C +C A+K + I + P+IL I LK
Sbjct: 589 LTLEIYGWVESLQDALTQFTRPEDLDGENMYRCSRCAGYVRARKELSIHEAPNILTIVLK 648
Query: 259 RFKYMEQLGRYKKLSYRVVFPLELRLSD-TVEEADIE--YSLFAVVVHVGS--GPNHGHY 313
RF Q GRY K++ + FP L + D+ Y L+AV+VH+ + GHY
Sbjct: 649 RF----QEGRYGKINKCISFPEMLDMIPFMTRTGDVPPLYMLYAVIVHLDTLNASFSGHY 704
Query: 314 VSLVKS-HNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 361
+S VK +W DD + + + V ++ Y+LFY
Sbjct: 705 ISYVKDLRGNWYRIDDSEIHPVPMTQVM------------SEGAYMLFY 741
>AT2G24640.1 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10479341 REVERSE LENGTH=672
Length = 672
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 149/320 (46%), Gaps = 39/320 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL N GN+C+ N VLQ L + P LLE G+ + + N L + + +
Sbjct: 175 GLTNCGNSCFANVVLQCLSWTRPLVAYLLER-GHKR---ECRRNDWCFLCEFENHLDRAN 230
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETSP 143
+P + RL +DAHE + F ++ + + E ++ P
Sbjct: 231 YSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEF----GGEKVVP 286
Query: 144 PSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSLD 203
P ++ L+ ++ F G+L ++ +C C V+ + E DL+++
Sbjct: 287 PR---------------AQETTLIQYI---FGGLLQSQVQCTACSNVSDQYENMMDLTVE 328
Query: 204 IEQNS-SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 262
I ++ S+ CL F++ E L ++ + CD+C +A KR+ I+ P+IL I LKRF
Sbjct: 329 IHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRF-- 386
Query: 263 MEQLGRYKKLSYRVVFP----LELRLSDTVEEADIEYSLFAVVVHVG--SGPNHGHYVSL 316
Q GR+ KL+ R+ FP L +S E +D+ Y L+AV+VH+ + GHY+
Sbjct: 387 --QGGRFGKLNKRISFPETFDLGPYMSGGGEGSDV-YKLYAVIVHLDMLNASFFGHYICY 443
Query: 317 VKS-HNHWLFFDDENVEMID 335
VK +W DD VE ++
Sbjct: 444 VKDFRGNWYRIDDSEVEKVE 463
>AT2G24640.2 | Symbols: UBP19 | ubiquitin-specific protease 19 |
chr2:10475613-10478388 REVERSE LENGTH=502
Length = 502
Score = 115 bits (289), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 149/320 (46%), Gaps = 39/320 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISSQK 83
GL N GN+C+ N VLQ L + P LLE G+ + + N L + + +
Sbjct: 5 GLTNCGNSCFANVVLQCLSWTRPLVAYLLER-GHKR---ECRRNDWCFLCEFENHLDRAN 60
Query: 84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETSP 143
+P + RL +DAHE + F +D+++ ++ P
Sbjct: 61 YSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFA----IDMMQSVCLDEFGGEKVVP 116
Query: 144 PSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLSLD 203
P ++ L+ ++ F G+L ++ +C C V+ + E DL+++
Sbjct: 117 PR---------------AQETTLIQYI---FGGLLQSQVQCTACSNVSDQYENMMDLTVE 158
Query: 204 IEQNS-SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKY 262
I ++ S+ CL F++ E L ++ + CD+C +A KR+ I+ P+IL I LKRF
Sbjct: 159 IHGDAVSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRF-- 216
Query: 263 MEQLGRYKKLSYRVVFP----LELRLSDTVEEADIEYSLFAVVVHVG--SGPNHGHYVSL 316
Q GR+ KL+ R+ FP L +S E +D+ Y L+AV+VH+ + GHY+
Sbjct: 217 --QGGRFGKLNKRISFPETFDLGPYMSGGGEGSDV-YKLYAVIVHLDMLNASFFGHYICY 273
Query: 317 VKS-HNHWLFFDDENVEMID 335
VK +W DD VE ++
Sbjct: 274 VKDFRGNWYRIDDSEVEKVE 293
>AT3G49600.1 | Symbols: UBP26, SUP32, ATUBP26 | ubiquitin-specific
protease 26 | chr3:18380942-18386662 REVERSE LENGTH=1067
Length = 1067
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/354 (25%), Positives = 160/354 (45%), Gaps = 52/354 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEEN-LLTCLADLFSQISSQ 82
GL N G TCY NS+LQ LY FRE + + ++N +L +A LF+Q+ +
Sbjct: 107 GLTNLGATCYANSILQCLYMNTAFREGVFSV-----EVHVLKQNPVLDQIARLFAQLHAS 161
Query: 83 KKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQETS 142
+K + FV+ L+ N + QD HEF
Sbjct: 162 QK--SFVDSDAFVKTLELDNGV-----QQDTHEF-------------------------- 188
Query: 143 PPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQC---ETVTARDETFFD 199
+ + + L + GVK + T V F G +++ T C +C +++ E F+
Sbjct: 189 --LTLLLSLLERCLLHSGVKAK---TIVQDLFSGSVSHVTTCSKCGRDSEASSKMEDFYA 243
Query: 200 LSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKR 259
L L+++ S+ + L ++ S E LN ++++FC C + +A + +K++ P ++ LKR
Sbjct: 244 LELNVKGLKSLDASLNDYLSLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKR 303
Query: 260 FKYMEQLGRYKKLSYRVVFPLELRLSDTVEEAD---IEYSLFAVVVHVGSGPNHGHYVSL 316
++ + KK++ FP L + + E+ + Y L AV++H GS N GHYV+
Sbjct: 304 CIFLPKTTAKKKITSSFSFPQVLDMGSRLAESSQNKLTYDLSAVLIHKGSAVNSGHYVAH 363
Query: 317 VKSHNH--WLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGSGN 368
+K W FDDE+V + + S+ + SN + + SG+
Sbjct: 364 IKDEKTGLWWEFDDEHVSELGKRPCNEASSSTPQSESNGTASSGNITDGIQSGS 417
>AT4G17895.1 | Symbols: UBP20 | ubiquitin-specific protease 20 |
chr4:9939914-9942698 FORWARD LENGTH=695
Length = 695
Score = 110 bits (275), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 152/361 (42%), Gaps = 77/361 (21%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQI---- 79
GL N GN+C+ NSV Q VP E LL + E C + F I
Sbjct: 177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSF---------RYEVPCHCGNEFFCVIRAIR 227
Query: 80 ----SSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFA 135
++ + + IAP F L + F+ Y +DAHEFL L +L +
Sbjct: 228 YHIEAALRPERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKL--------EIC 279
Query: 136 KNDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDE 195
+D+ + G + + + F G L + +C C+ V+ E
Sbjct: 280 GSDRTS---------------FRGDITSQDV-------FSGRLISGLRCCNCDYVSETYE 317
Query: 196 TFFDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVI 255
LSL+IE ++ S L++F+ E L+ ++ CD C +K++ + K P +
Sbjct: 318 KSVGLSLEIEDVDTLGSALESFTRVEKLD--EQLTCDNCNEKVSKEKQLLLDKLPLVATF 375
Query: 256 HLKRFK----YMEQLGRYKKLSYRVVFPLELRLSDTVE-----EADIEYSLFAVVVHVGS 306
HLKRFK YME++ ++ K+ PLE+ L + E +Y L+A+V H G
Sbjct: 376 HLKRFKNNGLYMEKIYKHVKI------PLEIDLQPYMRNIQENEVSTKYHLYALVEHFGY 429
Query: 307 GPNHGHYVSLVKSHNH-WLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVG 365
+GHY S V+S W FDD V IDE V + YILFY G
Sbjct: 430 SVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVL------------SQDSYILFYAREG 477
Query: 366 S 366
+
Sbjct: 478 T 478
>AT5G46740.1 | Symbols: UBP21 | ubiquitin-specific protease 21 |
chr5:18965410-18968492 REVERSE LENGTH=732
Length = 732
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 147/351 (41%), Gaps = 51/351 (14%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEY-YGNNKSITDAEENLLTCLADLFSQISSQ 82
GL N GNTC+ SVLQ VP + L + YGN + + + ++ L D I
Sbjct: 164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYGNPCNCGNEKFCVMQALRD---HIELA 220
Query: 83 KKKTGV-IAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
+ +G I RF L + F +DAHEFL L++L
Sbjct: 221 LRSSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKL----------------- 263
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
E+ PKN L G V + L V F G L + C C +V+ E S
Sbjct: 264 ----ERCCLDPKNQL--GSVSSQDL-NIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWS 316
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
L+IE +++ L++F+ E L ED+ CD C +K+++ K P + HLKRF
Sbjct: 317 LEIEDVNTLWKALESFTCVEKL--EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRF- 373
Query: 262 YMEQLGRYKKLSYRVVFPLELRLSDTVE-----EADIEYSLFAVVVHVGSGPNHGHYVSL 316
+K+ + FPLEL LS + E Y L+A V H+G GHY S
Sbjct: 374 -TNDGVTMEKIFDHIEFPLELDLSPFMSSNHDPEVSTRYHLYAFVEHIGIRATFGHYSSY 432
Query: 317 VKSHNH-WLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGS 366
V+S W FDD V I E V + YILFY G+
Sbjct: 433 VRSAPETWHNFDDSKVTRISEERVL------------SRPAYILFYAREGT 471
>AT4G30890.3 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 160/373 (42%), Gaps = 51/373 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQI---- 79
GL N GN C+ N+ LQAL C PF QLL+ + I A+ L ++ S++
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFV-QLLQKI-QLQDIPKADSPTLAAFSEFISELDVPS 255
Query: 80 -SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAHEFLNFLLNELVDI 127
SS + V+ P F L+ N + +DA EFL+F+++++ D
Sbjct: 256 SSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 128 LEKEAQFAKNDQETSPPSEKIANGPKNG--LANGGVKKEPLVT----WVHKNFQGILTNE 181
L K + ++ + T+ S I++ +G G K + VT +V I +
Sbjct: 316 LLKLKE--QSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQ 373
Query: 182 TKCL---QCETVTARDETFFDLSLDIEQNS--SITSCLKNFSSTETLNAEDKFFCDKCCS 236
K + + +A + + L LDI + I L FS+ E L K
Sbjct: 374 LKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGK-TG 432
Query: 237 LQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSD----TVEEAD 292
+ A K +KI+K I+++HL RF Y Q KL V FPLEL L+ ++
Sbjct: 433 VVSASKSIKIQKLSKIMILHLMRFSYGSQ--GSTKLRKGVKFPLELNLNRSHLVSLSNES 490
Query: 293 IEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSSQEYSS 351
+ Y L A + H G P+ GHY + + N WL FDD +V I V
Sbjct: 491 LRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL----------- 539
Query: 352 NTDHGYILFYESV 364
D Y+LFY+ V
Sbjct: 540 -HDQAYVLFYKQV 551
>AT4G30890.2 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 160/373 (42%), Gaps = 51/373 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQI---- 79
GL N GN C+ N+ LQAL C PF QLL+ + I A+ L ++ S++
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFV-QLLQKI-QLQDIPKADSPTLAAFSEFISELDVPS 255
Query: 80 -SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAHEFLNFLLNELVDI 127
SS + V+ P F L+ N + +DA EFL+F+++++ D
Sbjct: 256 SSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 128 LEKEAQFAKNDQETSPPSEKIANGPKNG--LANGGVKKEPLVT----WVHKNFQGILTNE 181
L K + ++ + T+ S I++ +G G K + VT +V I +
Sbjct: 316 LLKLKE--QSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQ 373
Query: 182 TKCL---QCETVTARDETFFDLSLDIEQNS--SITSCLKNFSSTETLNAEDKFFCDKCCS 236
K + + +A + + L LDI + I L FS+ E L K
Sbjct: 374 LKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGK-TG 432
Query: 237 LQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSD----TVEEAD 292
+ A K +KI+K I+++HL RF Y Q KL V FPLEL L+ ++
Sbjct: 433 VVSASKSIKIQKLSKIMILHLMRFSYGSQ--GSTKLRKGVKFPLELNLNRSHLVSLSNES 490
Query: 293 IEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSSQEYSS 351
+ Y L A + H G P+ GHY + + N WL FDD +V I V
Sbjct: 491 LRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL----------- 539
Query: 352 NTDHGYILFYESV 364
D Y+LFY+ V
Sbjct: 540 -HDQAYVLFYKQV 551
>AT4G30890.1 | Symbols: UBP24 | ubiquitin-specific protease 24 |
chr4:15036383-15038825 REVERSE LENGTH=551
Length = 551
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 105/373 (28%), Positives = 160/373 (42%), Gaps = 51/373 (13%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQI---- 79
GL N GN C+ N+ LQAL C PF QLL+ + I A+ L ++ S++
Sbjct: 198 GLINAGNLCFLNATLQALLSCSPFV-QLLQKI-QLQDIPKADSPTLAAFSEFISELDVPS 255
Query: 80 -SSQKKKTGVI------APKRFVQRLKK-----QNELFRSYMHQDAHEFLNFLLNELVDI 127
SS + V+ P F L+ N + +DA EFL+F+++++ D
Sbjct: 256 SSSIRNNVTVVEAGRPFRPAMFEGVLRNFTPDVLNNMSGRPRQEDAQEFLSFIMDQMHDE 315
Query: 128 LEKEAQFAKNDQETSPPSEKIANGPKNG--LANGGVKKEPLVT----WVHKNFQGILTNE 181
L K + ++ + T+ S I++ +G G K + VT +V I +
Sbjct: 316 LLKLKE--QSPKVTASKSSVISSANDDGDEWETVGPKNKSAVTRTQSFVPSELSEIFGGQ 373
Query: 182 TKCL---QCETVTARDETFFDLSLDIEQNS--SITSCLKNFSSTETLNAEDKFFCDKCCS 236
K + + +A + + L LDI + I L FS+ E L K
Sbjct: 374 LKSVVKAKGTKASATVQPYLLLHLDIHPDGVQGIEDALHLFSAQEDLEGYRASVTGK-TG 432
Query: 237 LQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSD----TVEEAD 292
+ A K +KI+K I+++HL RF Y Q KL V FPLEL L+ ++
Sbjct: 433 VVSASKSIKIQKLSKIMILHLMRFSYGSQ--GSTKLRKGVKFPLELNLNRSHLVSLSNES 490
Query: 293 IEYSLFAVVVHVGSGPNHGHYVSLVKSHN-HWLFFDDENVEMIDESAVQTFFGSSQEYSS 351
+ Y L A + H G P+ GHY + + N WL FDD +V I V
Sbjct: 491 LRYELVATITHHGWDPSKGHYTTDARRKNGQWLRFDDASVTPIGTKLVL----------- 539
Query: 352 NTDHGYILFYESV 364
D Y+LFY+ V
Sbjct: 540 -HDQAYVLFYKQV 551
>AT3G11910.1 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1115
Length = 1115
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 147/343 (42%), Gaps = 54/343 (15%)
Query: 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISS 81
+ GL+N G TCY NS+LQ LY FR+ + Y+ ++ L LF ++
Sbjct: 197 FVGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTASIPLALQSLFYKL-- 252
Query: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
Q T V EL +S+ F+ + EL +L
Sbjct: 253 QYNDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL------------- 288
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
EK+ + K + G ++K F+G N +C+ + + R E+F+DL
Sbjct: 289 ---CEKLEDKMKGTVVEGTIQKL---------FEGHHMNYIECINVDYKSTRKESFYDLQ 336
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
LD++ + + + E L ++K+ + LQ+A+K + P +L + LKRF+
Sbjct: 337 LDVKGCKDVYASFDKYVEVERLEGDNKYHAE-GHDLQDAKKGVLFIDFPPVLQLQLKRFE 395
Query: 262 YMEQLGRYKKLSYRVVFPLELRLS---------DTVEEADIEYSLFAVVVHVGSGPNHGH 312
Y K++ R FPL+L L D + Y+L +V+VH G G + GH
Sbjct: 396 YDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSG-GVHGGH 454
Query: 313 YVSLVKS--HNHWLFFDDENVEMID-ESAVQTFFGSSQEYSSN 352
Y + ++ + W FDDE V D + A++ +G +E N
Sbjct: 455 YYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQN 497
>AT3G11910.2 | Symbols: UBP13 | ubiquitin-specific protease 13 |
chr3:3761758-3770290 REVERSE LENGTH=1114
Length = 1114
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/343 (25%), Positives = 147/343 (42%), Gaps = 54/343 (15%)
Query: 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISS 81
+ GL+N G TCY NS+LQ LY FR+ + Y+ ++ L LF ++
Sbjct: 196 FVGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTASIPLALQSLFYKL-- 251
Query: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
Q T V EL +S+ F+ + EL +L
Sbjct: 252 QYNDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL------------- 287
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
EK+ + K + G ++K F+G N +C+ + + R E+F+DL
Sbjct: 288 ---CEKLEDKMKGTVVEGTIQKL---------FEGHHMNYIECINVDYKSTRKESFYDLQ 335
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
LD++ + + + E L ++K+ + LQ+A+K + P +L + LKRF+
Sbjct: 336 LDVKGCKDVYASFDKYVEVERLEGDNKYHAE-GHDLQDAKKGVLFIDFPPVLQLQLKRFE 394
Query: 262 YMEQLGRYKKLSYRVVFPLELRLS---------DTVEEADIEYSLFAVVVHVGSGPNHGH 312
Y K++ R FPL+L L D + Y+L +V+VH G G + GH
Sbjct: 395 YDFMRDTMVKINDRYEFPLQLDLDREDGRYLSPDADKSVRNLYTLHSVLVHSG-GVHGGH 453
Query: 313 YVSLVKS--HNHWLFFDDENVEMID-ESAVQTFFGSSQEYSSN 352
Y + ++ + W FDDE V D + A++ +G +E N
Sbjct: 454 YYAFIRPTLSDQWYKFDDERVTKEDVKRALEEQYGGEEELPQN 496
>AT5G10790.1 | Symbols: UBP22 | ubiquitin-specific protease 22 |
chr5:3410638-3412559 FORWARD LENGTH=557
Length = 557
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/378 (23%), Positives = 149/378 (39%), Gaps = 83/378 (21%)
Query: 16 FPEGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADL 75
FP G R GL N G+TC+ N+VLQAL P R L N LL DL
Sbjct: 172 FPLGLR--GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDL 229
Query: 76 ---FSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEA 132
FS + S + +P + + + +Y QD+HEF LL+ + + K
Sbjct: 230 DVIFSAMFSGDRTP--YSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIHENEGKSK 287
Query: 133 QFAKNDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTA 192
++++E HK F G+L ++ C C + +
Sbjct: 288 CLYQDNEECQ-------------------------CITHKAFSGLLRSDVTCTTCGSTST 322
Query: 193 RDETFFDLSL-----------DIEQN------------SSITSCLKNFSSTETLNAEDKF 229
+ F D+SL D +N +++ CL F+ +E L + K
Sbjct: 323 TYDPFIDISLTLDSMNGFSPADCRKNRYSGGPSVNAIMPTLSGCLDFFTRSEKLGPDQKL 382
Query: 230 FCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLSDTVE 289
C C +E+ K+M I++ P +L +H+KRF++ +K+ + +P L +S +
Sbjct: 383 NCQSCGEKRESSKQMSIRRLPLLLCLHVKRFEHSLTRKTSRKIDSYLQYPFRLNMSPYLS 442
Query: 290 EADI---------------------------EYSLFAVVVHVGSGPNHGHYVSLVKSHNH 322
+ I E+ +FAVV H G + GHYV+ ++
Sbjct: 443 SSIIGKRFGNRIFAFDGEGEYDSSSSSSPSAEFEIFAVVTHKGMLES-GHYVTYLRLKGL 501
Query: 323 WLFFDDENVEMIDESAVQ 340
W DD + ++E V+
Sbjct: 502 WYRCDDAWINEVEEEVVR 519
>AT5G06600.1 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1116
Length = 1116
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 54/339 (15%)
Query: 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISS 81
+ GL+N G TCY NS+LQ LY FR+ + Y+ ++ L LF ++
Sbjct: 198 FVGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTASIPLALQSLFYKL-- 253
Query: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
Q T V EL +S+ F+ + EL +L
Sbjct: 254 QYNDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL------------- 289
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
EK+ + K + G +++ F+G N +C+ + + R E+F+DL
Sbjct: 290 ---CEKLEDKMKGTVVEGTIQQL---------FEGHHMNYIECINVDFKSTRKESFYDLQ 337
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
LD++ + + + E L ++K+ + LQ+A+K + P +L + LKRF+
Sbjct: 338 LDVKGCKDVYASFDKYVEVERLEGDNKYHAE-GHGLQDAKKGVLFIDFPPVLQLQLKRFE 396
Query: 262 YMEQLGRYKKLSYRVVFPLELRL---------SDTVEEADIEYSLFAVVVHVGSGPNHGH 312
Y K++ R FPLEL L D Y+L +V+VH G G + GH
Sbjct: 397 YDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGH 455
Query: 313 YVSLVKS--HNHWLFFDDENVEMID-ESAVQTFFGSSQE 348
Y + ++ + W FDDE V D + A++ +G +E
Sbjct: 456 YYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEE 494
>AT5G06600.2 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2019545-2027834 REVERSE LENGTH=1115
Length = 1115
Score = 89.4 bits (220), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 54/339 (15%)
Query: 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISS 81
+ GL+N G TCY NS+LQ LY FR+ + Y+ ++ L LF ++
Sbjct: 197 FVGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTASIPLALQSLFYKL-- 252
Query: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
Q T V EL +S+ F+ + EL +L
Sbjct: 253 QYNDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL------------- 288
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
EK+ + K + G +++ F+G N +C+ + + R E+F+DL
Sbjct: 289 ---CEKLEDKMKGTVVEGTIQQL---------FEGHHMNYIECINVDFKSTRKESFYDLQ 336
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
LD++ + + + E L ++K+ + LQ+A+K + P +L + LKRF+
Sbjct: 337 LDVKGCKDVYASFDKYVEVERLEGDNKYHAE-GHGLQDAKKGVLFIDFPPVLQLQLKRFE 395
Query: 262 YMEQLGRYKKLSYRVVFPLELRL---------SDTVEEADIEYSLFAVVVHVGSGPNHGH 312
Y K++ R FPLEL L D Y+L +V+VH G G + GH
Sbjct: 396 YDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGH 454
Query: 313 YVSLVKS--HNHWLFFDDENVEMID-ESAVQTFFGSSQE 348
Y + ++ + W FDDE V D + A++ +G +E
Sbjct: 455 YYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEE 493
>AT5G06600.3 | Symbols: UBP12 | ubiquitin-specific protease 12 |
chr5:2020682-2027834 REVERSE LENGTH=985
Length = 985
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 145/339 (42%), Gaps = 54/339 (15%)
Query: 22 YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFSQISS 81
+ GL+N G TCY NS+LQ LY FR+ + Y+ ++ L LF ++
Sbjct: 198 FVGLKNQGATCYMNSLLQTLYHIPYFRKAV--YHMPTTENDAPTASIPLALQSLFYKL-- 253
Query: 82 QKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQET 141
Q T V EL +S+ F+ + EL +L
Sbjct: 254 QYNDTSVAT-----------KELTKSFGWDTYDSFMQHDVQELNRVL------------- 289
Query: 142 SPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETFFDLS 201
EK+ + K + G +++ F+G N +C+ + + R E+F+DL
Sbjct: 290 ---CEKLEDKMKGTVVEGTIQQ---------LFEGHHMNYIECINVDFKSTRKESFYDLQ 337
Query: 202 LDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFK 261
LD++ + + + E L ++K+ + LQ+A+K + P +L + LKRF+
Sbjct: 338 LDVKGCKDVYASFDKYVEVERLEGDNKYHAE-GHGLQDAKKGVLFIDFPPVLQLQLKRFE 396
Query: 262 YMEQLGRYKKLSYRVVFPLELRL---------SDTVEEADIEYSLFAVVVHVGSGPNHGH 312
Y K++ R FPLEL L D Y+L +V+VH G G + GH
Sbjct: 397 YDFMRDTMVKINDRYEFPLELDLDREDGKYLSPDADRSVRNLYTLHSVLVHSG-GVHGGH 455
Query: 313 YVSLVKS--HNHWLFFDDENVEMID-ESAVQTFFGSSQE 348
Y + ++ + W FDDE V D + A++ +G +E
Sbjct: 456 YYAFIRPTLSDQWYKFDDERVTKEDLKRALEEQYGGEEE 494
>AT2G40930.1 | Symbols: UBP5, ATUBP5, PDE323 | ubiquitin-specific
protease 5 | chr2:17076714-17082192 REVERSE LENGTH=924
Length = 924
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 22/160 (13%)
Query: 209 SITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYMEQLGR 268
S+ +CL+ F E L ++ +FC +C ++A K++ + + P +LVIHLKRF Y +
Sbjct: 769 SLYACLEAFLREEPLVPDEMWFCPQCNERRQASKKLDLWRLPEVLVIHLKRFSYSRSMKH 828
Query: 269 YKKLSYRVVFPL-ELRLSDTVEEADIE----YSLFAVVVHVGSGPNHGHYVSLVK--SHN 321
KL V FP+ +L L+ V ++ Y L+A+ H G G GHY + +K +
Sbjct: 829 --KLETFVNFPIHDLDLTKYVANKNLSQPQLYELYALTNHYG-GMGSGHYTAHIKLLDDS 885
Query: 322 HWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFY 361
W FDD ++ I+E V+ + Y+LFY
Sbjct: 886 RWYNFDDSHISHINEDDVK------------SGAAYVLFY 913
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 101/239 (42%), Gaps = 29/239 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYG---NNKSITDAEENLLTCLADLFSQIS 80
GL N GNTC+ NS +Q L F E Y N ++ L DL ++
Sbjct: 318 GLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQEINWQNPLGMVGELALAFGDLLRKLW 377
Query: 81 SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILE--KEAQFAKND 138
+ + IAP+ F +L + F Y D+ E L FLL+ L + L K + +
Sbjct: 378 APGRTP--IAPRPFKAKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNRVKHKPYINSR 435
Query: 139 QETSPPSEKIANG-PKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDETF 197
P E++A+ KN +A + + ++ V QG + C C V+ + F
Sbjct: 436 DADGRPDEEVADEFWKNHIA----RNDSIIVDV---CQGQYKSTLVCPICNKVSVTFDPF 488
Query: 198 FDLSLDIEQNS------SITSCLKN-FSSTETLNAEDKFFC-------DKCCSLQEAQK 242
LSL ++ N+ ++ SC K ST T+N + C CSL+++++
Sbjct: 489 MYLSLPLQFNTTRAITVTVFSCDKTALPSTITVNVSKQGRCRDLIQALTNACSLKQSEE 547
>AT5G22030.1 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 205 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 264
+++ S+ CL+ F + E L +D ++C C ++A K++ + + P ILVIHLKRF Y
Sbjct: 761 QESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSR 820
Query: 265 QLGRYKKLSYRVVFPLE-LRLSDTVE----EADIEYSLFAVVVHVGSGPNHGHYVSLV-K 318
+ KL V FPL+ L LS + + Y L+A+ H GS GHY + V
Sbjct: 821 FMK--NKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSM-GGGHYTAYVHH 877
Query: 319 SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESV 364
+ W FDD +V I + ++ T Y+LFY+ +
Sbjct: 878 GGDRWYDFDDSHVHQISQEKIK------------TSAAYVLFYKRL 911
>AT5G22030.2 | Symbols: UBP8 | ubiquitin-specific protease 8 |
chr5:7290155-7296344 REVERSE LENGTH=913
Length = 913
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 82/166 (49%), Gaps = 21/166 (12%)
Query: 205 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 264
+++ S+ CL+ F + E L +D ++C C ++A K++ + + P ILVIHLKRF Y
Sbjct: 761 QESVSLFKCLEAFLTEEPLGPDDMWYCPGCKEHRQAIKKLDLWRLPEILVIHLKRFSYSR 820
Query: 265 QLGRYKKLSYRVVFPLE-LRLSDTVE----EADIEYSLFAVVVHVGSGPNHGHYVSLV-K 318
+ KL V FPL+ L LS + + Y L+A+ H GS GHY + V
Sbjct: 821 FMK--NKLEAYVDFPLDNLDLSSYISYKNGQTTYRYMLYAISNHYGSM-GGGHYTAYVHH 877
Query: 319 SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESV 364
+ W FDD +V I + ++ T Y+LFY+ +
Sbjct: 878 GGDRWYDFDDSHVHQISQEKIK------------TSAAYVLFYKRL 911
>AT4G10590.1 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 205 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 264
+++ S+ SCL+ F + E L +D +FC C ++A K++ + K P ILV HLKRF Y
Sbjct: 744 QESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSR 803
Query: 265 QLGRYKKLSYRVVFPL-ELRLSDTVEEADIE---YSLFAVVVHVGSGPNHGHYVSLVK-- 318
L K+ V FP+ +L LS V+ + + Y L+AV H G GHY + K
Sbjct: 804 YLK--NKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGL-GGGHYTAYAKLI 860
Query: 319 SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGS 366
N W FDD +V ++ES ++ Y+LFY V S
Sbjct: 861 DDNEWYHFDDSHVSSVNESEIK------------NSAAYVLFYRRVRS 896
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYG---NNKSITDAEENLLTCLADLFSQIS 80
GL N GNTC+ NS LQ L P E L+ Y N + L DL ++
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 363
Query: 81 SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130
S + + +AP+ F +L + F Y D+ E L FLL+ L + L K
Sbjct: 364 SSGRNS--VAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNK 411
>AT4G10590.2 | Symbols: UBP10 | ubiquitin-specific protease 10 |
chr4:6538919-6543272 REVERSE LENGTH=910
Length = 910
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 205 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 264
+++ S+ SCL+ F + E L +D +FC C ++A K++ + K P ILV HLKRF Y
Sbjct: 744 QESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSR 803
Query: 265 QLGRYKKLSYRVVFPL-ELRLSDTVEEADIE---YSLFAVVVHVGSGPNHGHYVSLVK-- 318
L K+ V FP+ +L LS V+ + + Y L+AV H G GHY + K
Sbjct: 804 YLK--NKIDTFVNFPVHDLDLSKYVKNKNDQSYLYELYAVSNHYGGL-GGGHYTAYAKLI 860
Query: 319 SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGS 366
N W FDD +V ++ES ++ Y+LFY V S
Sbjct: 861 DDNEWYHFDDSHVSSVNESEIK------------NSAAYVLFYRRVRS 896
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 50/110 (45%), Gaps = 5/110 (4%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYG---NNKSITDAEENLLTCLADLFSQIS 80
GL N GNTC+ NS LQ L P E L+ Y N + L DL ++
Sbjct: 304 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 363
Query: 81 SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130
S + + +AP+ F +L + F Y D+ E L FLL+ L + L K
Sbjct: 364 SSGRNS--VAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNK 411
>AT4G10570.1 | Symbols: UBP9 | ubiquitin-specific protease 9 |
chr4:6523657-6528058 REVERSE LENGTH=923
Length = 923
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 84/168 (50%), Gaps = 21/168 (12%)
Query: 205 EQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYME 264
+++ S+ SCL+ F + E L +D +FC C ++A K++ + K P ILV HLKRF Y
Sbjct: 745 QESISLFSCLEAFLAEEPLGPDDMWFCPSCKEHRQANKKLDLWKLPDILVFHLKRFTYSR 804
Query: 265 QLGRYKKLSYRVVFPL-ELRLSDTVEEADIE---YSLFAVVVHVGSGPNHGHYVSLVK-- 318
L K+ V FP+ +L LS V+ + + Y L+AV H G GHY + K
Sbjct: 805 YLK--NKIDTFVNFPVHDLDLSKYVKNKNGQSYLYELYAVSNHYGGL-GGGHYTAYAKLI 861
Query: 319 SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGS 366
N W FDD +V ++ES ++ Y+LFY V S
Sbjct: 862 DDNKWYHFDDSHVSSVNESEIR------------NSAAYVLFYRRVRS 897
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 49/110 (44%), Gaps = 5/110 (4%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYG---NNKSITDAEENLLTCLADLFSQIS 80
GL N GNTC+ NS LQ L P E L+ Y N + L DL ++
Sbjct: 305 GLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLW 364
Query: 81 SQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEK 130
S + +AP+ F +L + F Y D+ E L FLL+ L + L K
Sbjct: 365 SSGRN--AVAPRAFKTKLARFAPQFSGYNQHDSQELLAFLLDGLHEDLNK 412
>AT1G32850.1 | Symbols: UBP11 | ubiquitin-specific protease 11 |
chr1:11902629-11906900 FORWARD LENGTH=892
Length = 892
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 84/171 (49%), Gaps = 25/171 (14%)
Query: 204 IEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYM 263
+++ S+ SCL+ F + E L +D ++C C ++A K++ + K P ILV HLKRF Y
Sbjct: 729 MQEGISLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRFTY- 787
Query: 264 EQLGRY--KKLSYRVVFPL-ELRLSDTVEEADIE---YSLFAVVVHVGSGPNHGHYVSLV 317
RY K+ V F + +L LS V+ D + Y L+A+ H G GHY +
Sbjct: 788 ---SRYFKNKIDTLVNFHIHDLDLSKYVKNEDGQSYLYELYAISNHYGGL-GGGHYTAYA 843
Query: 318 K--SHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSNTDHGYILFYESVGS 366
K W FDD V ++ES ++ T Y+LFY+ V S
Sbjct: 844 KLMDETKWYNFDDSRVSAVNESEIK------------TSAAYVLFYQRVKS 882
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 16 FPEGER--YFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYG---NNKSITDAEENLLT 70
F +GE+ GL+N GNTC+ NS LQ L P E L+ Y N K+ L
Sbjct: 292 FGKGEKRGLGGLQNLGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAI 351
Query: 71 CLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL---VDI 127
+L ++ S + T +AP+ F +L + F Y D+ E L FLL+ L ++
Sbjct: 352 AFGELLRKLWSSGQNT--VAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLDGLHEDLNK 409
Query: 128 LEKEAQFAKNDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQC 187
++++ D + P E K A + + ++ V FQG + C C
Sbjct: 410 VKRKPYIEAKDSDGRPDDEVAEEKWKYHKA----RNDSVIVDV---FQGQYKSTLVCPDC 462
Query: 188 ETVTARDETFFDLSLDIEQNSSITSCLKNF 217
++ + F LSL + + + + + F
Sbjct: 463 GKISITFDPFMYLSLPLPSSRTRSMTVTVF 492
>AT1G04860.1 | Symbols: UBP2, ATUBP2 | ubiquitin-specific protease 2
| chr1:1369306-1372290 REVERSE LENGTH=961
Length = 961
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 81/198 (40%), Gaps = 29/198 (14%)
Query: 7 KLEKALGDQFPEGERYF--GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDA 64
KLE A+ + Y GL N GNTC+ NS++Q L R+ L+ G+
Sbjct: 213 KLEGAVTSDIEARDGYVVRGLVNLGNTCFFNSIMQNLLSLDRLRDHFLKENGSGVGGP-- 270
Query: 65 EENLLTCLADLFSQISSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNEL 124
L + L LF++ + VI P+ F + FR Y D+HE L LL+ L
Sbjct: 271 ---LASSLRKLFTETKPEAGLKSVINPRAFFGSFCSKAPQFRGYDQHDSHELLRCLLDSL 327
Query: 125 VDILEKEAQFAKNDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKC 184
+E+ A K G+++ K L+ V F G ++ C
Sbjct: 328 S-------------------TEESALRKKRGVSDNDEKSTTLIESV---FGGETSSIVSC 365
Query: 185 LQCETVTARDETFFDLSL 202
++C + E F DLSL
Sbjct: 366 MECGHSSKVYEPFLDLSL 383
>AT4G39370.3 | Symbols: UBP27 | ubiquitin-specific protease 27 |
chr4:18306392-18308625 FORWARD LENGTH=505
Length = 505
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEEN----LLTCLADLFSQI 79
GL+N GN C+ N +LQAL C FR L + + E+ L L+ L ++
Sbjct: 75 GLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQEL 134
Query: 80 SSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQ 139
+ + V P++ + L + F QDA E L L+ L++E
Sbjct: 135 GTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAE----ALLHLISSLQEEIVVCYRPS 190
Query: 140 ETSPPSEKIAN------GPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTAR 193
++S S+ + + P GL +G ++ + + F GIL + C C + +
Sbjct: 191 QSSNLSDILFSRNLRMLAPSEGL-HGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQISL 249
Query: 194 DETFF-DLSL---------DIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 234
+ FF L L +I ++ CLK F +TE + + +FC +C
Sbjct: 250 EFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKV---ENYFCYRC 297
>AT4G39370.2 | Symbols: UBP27 | ubiquitin-specific protease 27 |
chr4:18306392-18307931 FORWARD LENGTH=361
Length = 361
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEEN----LLTCLADLFSQI 79
GL+N GN C+ N +LQAL C FR L + + E+ L L+ L ++
Sbjct: 75 GLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQEL 134
Query: 80 SSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQ 139
+ + V P++ + L + F QDA E L L+ L++E
Sbjct: 135 GTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAE----ALLHLISSLQEEIVVCYRPS 190
Query: 140 ETSPPSEKIAN------GPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTAR 193
++S S+ + + P GL +G ++ + + F GIL + C C + +
Sbjct: 191 QSSNLSDILFSRNLRMLAPSEGL-HGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQISL 249
Query: 194 DETFF-DLSL---------DIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 234
+ FF L L +I ++ CLK F +TE + + +FC +C
Sbjct: 250 EFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKV---ENYFCYRC 297
>AT4G39370.1 | Symbols: UBP27 | ubiquitin-specific protease 27 |
chr4:18306392-18308625 FORWARD LENGTH=494
Length = 494
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 97/231 (41%), Gaps = 28/231 (12%)
Query: 24 GLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEEN----LLTCLADLFSQI 79
GL+N GN C+ N +LQAL C FR L + + E+ L L+ L ++
Sbjct: 75 GLQNLGNNCFLNVILQALASCKDFRSFLQWVLEDARGSLAGEQEEQLPLTFALSALLQEL 134
Query: 80 SSQKKKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAKNDQ 139
+ + V P++ + L + F QDA E L L+ L++E
Sbjct: 135 GTVGSRRSVSNPRKVMVTLTDYAKNFNLTSQQDAAE----ALLHLISSLQEEIVVCYRPS 190
Query: 140 ETSPPSEKIAN------GPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTAR 193
++S S+ + + P GL +G ++ + + F GIL + C C + +
Sbjct: 191 QSSNLSDILFSRNLRMLAPSEGL-HGLMELKRWHKHLRGPFDGILGSTLMCRTCSSQISL 249
Query: 194 DETFF-DLSL---------DIEQNSSITSCLKNFSSTETLNAEDKFFCDKC 234
+ FF L L +I ++ CLK F +TE + + +FC +C
Sbjct: 250 EFQFFHTLPLSPLLHHGGYNIMSGCTLEHCLKKFLNTEKV---ENYFCYRC 297
>AT2G32780.1 | Symbols: UBP1, ATUBP1 | ubiquitin-specific protease 1
| chr2:13898431-13901870 REVERSE LENGTH=1083
Length = 1083
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 25/188 (13%)
Query: 18 EGERYFGLENFGNTCYCNSVLQALYFCVPFREQLLEYYGNNKSITDAEENLLTCLADLFS 77
+G GL N GNTC+ NSV+Q L RE L K L++ L +LF+
Sbjct: 197 DGYAVRGLVNLGNTCFFNSVMQNLLSLDQLREHFL------KEDLSVSGPLVSSLKELFA 250
Query: 78 QISSQKKK-TGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNFLLNELVDILEKEAQFAK 136
+ +S+ I P+ + Q FR Y D+HE L LL+ L
Sbjct: 251 ESNSEASVFRNEINPRDLFFSVCSQAPQFRGYQQHDSHELLRCLLDGL------------ 298
Query: 137 NDQETSPPSEKIANGPKNGLANGGVKKEPLVTWVHKNFQGILTNETKCLQCETVTARDET 196
E S +K+ N + ++P T + F G +++ CL+C + E
Sbjct: 299 -SIEESSLRKKLGVSDSN---DSSTYQKP--TLIDSVFGGEISSTVSCLECGHFSKVYEP 352
Query: 197 FFDLSLDI 204
F DLSL +
Sbjct: 353 FMDLSLPV 360
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 69/137 (50%), Gaps = 15/137 (10%)
Query: 238 QEAQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELRLS---DT--VEEAD 292
++A+K++ I K P +L IHLKRF + GR KLS V F + LS DT EE +
Sbjct: 952 RDARKKVLINKAPPVLTIHLKRFS-QDARGRVSKLSGHVDFQEFIDLSKYMDTRCSEEDE 1010
Query: 293 IEYSLFAVVVHVGSGPNHGHYVSLVKSHNHWLFFDDENVEMIDESAVQTFFGSSQEYSSN 352
Y L +V H+G+ + GHYVS ++ H D + E S++ SQ ++
Sbjct: 1011 PVYRLAGLVEHLGAM-SRGHYVSYIRG-GHKERRDSDTKEP--NSSIWYHASDSQVRPAS 1066
Query: 353 TD-----HGYILFYESV 364
+ YILFYE +
Sbjct: 1067 LEEVLRSEAYILFYERI 1083