Miyakogusa Predicted Gene
- Lj0g3v0092709.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0092709.1 tr|I1MYR5|I1MYR5_SOYBN Ubiquitin
carboxyl-terminal hydrolase OS=Glycine max GN=Gma.55503 PE=3
SV=1,95.92,0,UCH,Peptidase C19, ubiquitin carboxyl-terminal hydrolase
2; UCH_2_3,Peptidase C19, ubiquitin carboxy,CUFF.5092.1
(1110 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC78958 homologue to UniRef100_A7R3S3 Cluster: Ubiquiti... 2159 0.0
gnl|LJGI|TC62283 similar to UniRef100_A7R3S3 Cluster: Ubiquitin ... 628 e-179
gnl|LJGI|TC59661 homologue to UniRef100_A7R3S3 Cluster: Ubiquiti... 517 e-146
gnl|LJGI|GO039780 homologue to UniRef100_A7QA78 Cluster: Ubiquit... 64 2e-09
>gnl|LJGI|TC78958 homologue to UniRef100_A7R3S3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (98%)
Length = 1825
Score = 2159 bits (1089), Expect = 0.0
Identities = 1103/1110 (99%)
Strand = Plus / Plus
Query: 1 atgggtgctacgggctccaagcttgagaaggctcttggcgaccaatttcctgaaggggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atgggtgctacgggctccaagcttgagaaggctcttggcgaccaatttcctgaaggggaa 410
Query: 61 cgttactttggccttgagaatttcggcaacacttgttactgcaacagcgttttgcaggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 cgttactttggccttgagaatttcggcaacacttgttactgcaacagcgttttgcaggct 470
Query: 121 ctatacttctgtgttccttttcgtgaacaattgctagagtattatggaaataacaaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctatacttctgtgttccttttcgtgaacaattgctagagtattatggaaataacaaaagc 530
Query: 181 ataacagatgcagaggaaaatcttttgacttgcttagctgacctattttcacagataagt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ataacagatgcagaggaaaatcttttgacttgcttagctgacctattttcacagataagt 590
Query: 241 tcccagaagaagaaaacaggtgtcattgctccaaaacgatttgtacagaggttgaaaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tcccagaagaagaaaacaggtgtcattgctccaaaacgatttgtacagaggttgaaaaaa 650
Query: 301 caaaatgaactgttccgtagctatatgcaccaggatgcccacgaattcttgaactttctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 caaaatgaactgttccgtagctatatgcaccaggatgcccacgaattcttgaactttctg 710
Query: 361 ttaaatgaacttgttgacattcttgagaaggaggcccagtttgcaaaaaatgatcaagag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttaaatgaacttgttgacattcttgagaaggaggcccagtttgcaaaaaatgatcaagag 770
Query: 421 acatcaccaccttctgaaaagattgcaaatggaccaaagaatggtctagctaatggtggt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 acatcaccaccttctgaaaagattgcaaatggaccaaagaatggtctagctaatggtggt 830
Query: 481 gttaaaaaagagcctttagttacttgggtgcacaaaaattttcagggaatactcaccaac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 gttaaaaaagagcctttagttacttgggtgcacaaaaattttcagggaatactcaccaac 890
Query: 541 gagacaaaatgcttgcaatgtgaaacagtaacggcaagggacgaaacattttttgacctg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gagacaaaatgcttgcaatgtgaaacagtaacggcaagggacgaaacattttttgacctg 950
Query: 601 agccttgatattgaacaaaacagttcgattacaagttgtttgaaaaatttcagttcgact 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 951 agccttgatattgaacaaaacagttcgattacaagttgtttgaaaaatttcagttcgact 1010
Query: 661 gagacgttgaatgccgaagacaaannnnnnngtgacaagtgctgcagcttgcaagaagcc 720
|||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 1011 gagacgttgaatgccgaagacaaatttttttgtgacaagtgctgcagcttgcaagaagcc 1070
Query: 721 cagaagaggatgaagataaagaaacctcctcacattttggtcatccatcttaagcggttt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1071 cagaagaggatgaagataaagaaacctcctcacattttggtcatccatcttaagcggttt 1130
Query: 781 aaatacatggaacagctaggccgctacaagaagctatcgtaccgtgttgtcttccccctt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1131 aaatacatggaacagctaggccgctacaagaagctatcgtaccgtgttgtcttccccctt 1190
Query: 841 gagctcaggttgagtgatactgttgaagaggcagatattgagtattctctatttgcagtt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1191 gagctcaggttgagtgatactgttgaagaggcagatattgagtattctctatttgcagtt 1250
Query: 901 gttgtccatgttgggagtgggcccaaccacgggcattatgtcagccttgtgaaaagccat 960
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1251 gttgtccatgttgggagtgggcccaaccacgggcattatgtcagccttgtgaaaagccat 1310
Query: 961 aaccactggttattttttgacgacgaaaatgttgagatgattgatgagtctgctgttcag 1020
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1311 aaccactggttattttttgacgacgaaaatgttgagatgattgatgagtctgctgttcag 1370
Query: 1021 acattctttgggtcatctcaagaatattccagtaatacagaccatggttacattttgttc 1080
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1371 acattctttgggtcatctcaagaatattccagtaatacagaccatggttacattttgttc 1430
Query: 1081 tatgagagcgttggctctggtaactgaaac 1110
||||||||||||||||||||||||||||||
Sbjct: 1431 tatgagagcgttggctctggtaactgaaac 1460
>gnl|LJGI|TC62283 similar to UniRef100_A7R3S3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (48%)
Length = 735
Score = 628 bits (317), Expect = e-179
Identities = 481/535 (89%), Gaps = 3/535 (0%)
Strand = Plus / Plus
Query: 1 atgggtgctacgggctccaagcttgagaaggctcttggcgaccaatttcctgaaggggaa 60
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||
Sbjct: 204 atgggtgctacgggctccaagcttgagaaggctcttggcgatcaattccctgaaggagaa 263
Query: 61 cgttactttggccttgagaatttcggcaacacttgttactgcaacagcgttttgcaggct 120
|||||||| ||||||||||||||||||||||||||||| |||||||| |||||||||||
Sbjct: 264 cgttacttcggccttgagaatttcggcaacacttgttattgcaacagtgttttgcaggca 323
Query: 121 ctatacttctgtgttccttttcgtgaacaattgctagagtattatggaaataacaaaagc 180
|||||||||||||| || ||||| |||||| |||| ||||||||||||||||||||||||
Sbjct: 324 ctatacttctgtgtgccatttcgggaacaactgctggagtattatggaaataacaaaagc 383
Query: 181 ataacagatgcagaggaaaatcttttgacttgcttagctgacctattttcacagataagt 240
||| ||| | || ||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 384 ataggggatccggaagaaaatcttttgacttgcttagctgacttattttcacagataagt 443
Query: 241 tcccagaagaagaaaacaggtgtcattgctccaaaacgatttgtacagaggttgaaaaaa 300
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct: 444 tcccagaagaagaaaacaggtgtcattgctcccaaacgatttgtacagaggttgaagaaa 503
Query: 301 caaaatgaactgttccgtagctatatgcaccaggatgcccacgaattcttgaactttctg 360
|| |||||||| |||||||||||||||||||||||||| || || |||||||||||| ||
Sbjct: 504 cagaatgaactcttccgtagctatatgcaccaggatgcacatgagttcttgaactttttg 563
Query: 361 ttaaatgaacttgttgacattcttgagaaggaggcccagtttgcaaaaaatgatcaagag 420
| ||||||||||| |||||||| ||||| ||||| ||| |||||||| ||||| |||
Sbjct: 564 ctgaatgaacttgtcgacattctggagaaagaggctcaggctgcaaaaactgatccagat 623
Query: 421 acatcaccaccttctgaaaagattgcaaatggaccaaagaatggtctagctaatggtggt 480
||||||||||||||||||||| |||| ||||| |||||||||| | |||||||||
Sbjct: 624 acatcaccaccttctgaaaaggttgccaatgggttcaagaatggtcatgttaatggtgg- 682
Query: 481 gttaaaaaagagcctttagttacttgggtgcacaaaaattttcagggaatactca 535
| | |||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 683 --tcagaaagagccgttagttacttgggtacacaaaaattttcagggaatactca 735
>gnl|LJGI|TC59661 homologue to UniRef100_A7R3S3 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (43%)
Length = 925
Score = 517 bits (261), Expect = e-146
Identities = 414/466 (88%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 622 agttcgattacaagttgtttgaaaaatttcagttcgactgagacgttgaatgccgaagac 681
||||| |||||||| || ||||||| ||||||| | |||||||| |||||||| || |||
Sbjct: 1 agttcaattacaagctgcttgaaaa-tttcagtcccactgagacattgaatgctgaggac 59
Query: 682 aaannnnnnngtgacaagtgctgcagcttgcaagaagcccagaagaggatgaagataaag 741
||| ||||||| |||||||| ||||||||||| |||||||||||||||||||||
Sbjct: 60 aaatttttctgtgacaaatgctgcagtttgcaagaagctcagaagaggatgaagataaag 119
Query: 742 aaacctcctcacattttggtcatccatcttaagcggtttaaatacatggaacagctaggc 801
||||| |||||||| ||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 120 aaaccacctcacatcttggtcatccatcttaagcggtttaaatacatggaacagctgggc 179
Query: 802 cgctacaagaagctatcgtaccgtgttgtcttcccccttgagctcaggttgagtgatact 861
|| ||||||||||| || ||||| ||||| ||||| |||||||| | |||||| | |||
Sbjct: 180 cggtacaagaagctgtcttaccgagttgttttcccgcttgagctgaagttgagcaacact 239
Query: 862 gttgaagaggcagatattgagtattctctatttgcagttgttgtccatgttgggagtggg 921
|||||||| ||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 240 gttgaagatgcagatattgagtattctctatttgcagtagttgtccatgtcgggagtggg 299
Query: 922 cccaaccacgggcattatgtcagccttgtgaaaagccataaccactggttattttttgac 981
|||||||| || |||||||||||||| ||||| || |||||||||||||||||||||||
Sbjct: 300 cccaaccatggccattatgtcagcctcgtgaagagtcataaccactggttattttttgat 359
Query: 982 gacgaaaatgttgagatgattgatgagtctgctgttcagacattctttgggtcatctcaa 1041
||||||||||||||||||||||||||||||||||| || || |||||||| ||| | ||
Sbjct: 360 gacgaaaatgttgagatgattgatgagtctgctgtgcaaacgttctttggatcagcacag 419
Query: 1042 gaatattccagtaatacagaccatggttacattttgttctatgaga 1087
|||||||| || || |||||||||||||||||||||||||||||||
Sbjct: 420 gaatattctagcaacacagaccatggttacattttgttctatgaga 465
>gnl|LJGI|GO039780 homologue to UniRef100_A7QA78 Cluster: Ubiquitin carboxyl-terminal
hydrolase; n=1; Vitis vinifera|Rep: Ubiquitin
carboxyl-terminal hydrolase - Vitis vinifera (Grape),
partial (7%)
Length = 372
Score = 63.9 bits (32), Expect = 2e-09
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1024 ttctttgggtcatctcaagaatattccagtaatacagaccatggttacattttgttctat 1083
|||||||| ||| | || |||||||| || || ||||||||||||||||||||||| |||
Sbjct: 362 ttctttggatcagcacaggaatattctagcaacacagaccatggttacattttgttttat 303
Query: 1084 gaga 1087
||||
Sbjct: 302 gaga 299