Miyakogusa Predicted Gene

Lj0g3v0078919.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0078919.1 tr|G7KN55|G7KN55_MEDTR E3 ubiquitin-protein
ligase RGLG2 OS=Medicago truncatula GN=MTR_6g021730
PE=4,78.31,0,COPINE,NULL; seg,NULL; Copine,Copine,CUFF.4034.1
         (176 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...   166   7e-42
AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...   166   7e-42
AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...   166   7e-42
AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 | chr5:464835...   166   7e-42
AT1G67800.4 | Symbols:  | Copine (Calcium-dependent phospholipid...   160   6e-40
AT1G67800.3 | Symbols:  | Copine (Calcium-dependent phospholipid...   160   6e-40
AT1G67800.1 | Symbols:  | Copine (Calcium-dependent phospholipid...   160   6e-40
AT1G67800.2 | Symbols:  | Copine (Calcium-dependent phospholipid...   159   7e-40
AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 | chr3:242734...   157   4e-39
AT5G63970.2 | Symbols:  | Copine (Calcium-dependent phospholipid...   130   4e-31
AT5G63970.1 | Symbols:  | Copine (Calcium-dependent phospholipid...   130   4e-31
AT1G79380.1 | Symbols:  | Ca(2)-dependent phospholipid-binding p...   130   6e-31

>AT5G14420.2 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 91/97 (93%)

Query: 79  GRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQ 138
           G D+K+RLERKYS+I+D+Y+S+++VTEALARAGLESSNLI+GID TKSNEWTG  SFNR+
Sbjct: 85  GSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRK 144

Query: 139 SLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           SLH IG+ PNPYEQAI+IIG+T+AAFDEDNLIPC+GF
Sbjct: 145 SLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGF 181


>AT5G14420.4 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 91/97 (93%)

Query: 79  GRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQ 138
           G D+K+RLERKYS+I+D+Y+S+++VTEALARAGLESSNLI+GID TKSNEWTG  SFNR+
Sbjct: 85  GSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRK 144

Query: 139 SLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           SLH IG+ PNPYEQAI+IIG+T+AAFDEDNLIPC+GF
Sbjct: 145 SLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGF 181


>AT5G14420.3 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 91/97 (93%)

Query: 79  GRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQ 138
           G D+K+RLERKYS+I+D+Y+S+++VTEALARAGLESSNLI+GID TKSNEWTG  SFNR+
Sbjct: 85  GSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRK 144

Query: 139 SLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           SLH IG+ PNPYEQAI+IIG+T+AAFDEDNLIPC+GF
Sbjct: 145 SLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGF 181


>AT5G14420.1 | Symbols: RGLG2 | RING domain ligase2 |
           chr5:4648355-4650563 REVERSE LENGTH=468
          Length = 468

 Score =  166 bits (420), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 75/97 (77%), Positives = 91/97 (93%)

Query: 79  GRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQ 138
           G D+K+RLERKYS+I+D+Y+S+++VTEALARAGLESSNLI+GID TKSNEWTG  SFNR+
Sbjct: 85  GSDNKKRLERKYSKISDDYSSLEQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRK 144

Query: 139 SLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           SLH IG+ PNPYEQAI+IIG+T+AAFDEDNLIPC+GF
Sbjct: 145 SLHFIGSSPNPYEQAITIIGRTLAAFDEDNLIPCYGF 181


>AT1G67800.4 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score =  160 bits (404), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 83/98 (84%)

Query: 78  TGRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNR 137
           +GR   + LERKYSRIADNY SIDEVT AL+ AGLESSNLI+GID TKSNEWTG  SF R
Sbjct: 55  SGRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGR 114

Query: 138 QSLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           +SLH IG  PNPY+QAISIIGKT++ FDEDNLIPC+GF
Sbjct: 115 KSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGF 152


>AT1G67800.3 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score =  160 bits (404), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 83/98 (84%)

Query: 78  TGRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNR 137
           +GR   + LERKYSRIADNY SIDEVT AL+ AGLESSNLI+GID TKSNEWTG  SF R
Sbjct: 55  SGRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGR 114

Query: 138 QSLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           +SLH IG  PNPY+QAISIIGKT++ FDEDNLIPC+GF
Sbjct: 115 KSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGF 152


>AT1G67800.1 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423237 REVERSE LENGTH=433
          Length = 433

 Score =  160 bits (404), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 83/98 (84%)

Query: 78  TGRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNR 137
           +GR   + LERKYSRIADNY SIDEVT AL+ AGLESSNLI+GID TKSNEWTG  SF R
Sbjct: 55  SGRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGR 114

Query: 138 QSLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           +SLH IG  PNPY+QAISIIGKT++ FDEDNLIPC+GF
Sbjct: 115 KSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGF 152


>AT1G67800.2 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr1:25421029-25423297 REVERSE LENGTH=453
          Length = 453

 Score =  159 bits (403), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 74/98 (75%), Positives = 83/98 (84%)

Query: 78  TGRDDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNR 137
           +GR   + LERKYSRIADNY SIDEVT AL+ AGLESSNLI+GID TKSNEWTG  SF R
Sbjct: 75  SGRQTPKNLERKYSRIADNYRSIDEVTAALSHAGLESSNLIVGIDVTKSNEWTGARSFGR 134

Query: 138 QSLHHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           +SLH IG  PNPY+QAISIIGKT++ FDEDNLIPC+GF
Sbjct: 135 KSLHFIGTTPNPYQQAISIIGKTLSVFDEDNLIPCYGF 172


>AT3G01650.1 | Symbols: RGLG1 | RING domain ligase1 |
           chr3:242734-245062 FORWARD LENGTH=489
          Length = 489

 Score =  157 bits (397), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 68/94 (72%), Positives = 86/94 (91%)

Query: 82  DKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQSLH 141
           D+++ +R+YS+I+DNY+S+ +V+EAL RAGLESSNLI+GID TKSNEWTG  SFNR+SLH
Sbjct: 122 DRKKFDRRYSKISDNYSSLLQVSEALGRAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLH 181

Query: 142 HIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           H+ N PNPYEQAI+IIG+T+AAFDEDNLIPC+GF
Sbjct: 182 HLSNTPNPYEQAITIIGRTLAAFDEDNLIPCYGF 215


>AT5G63970.2 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr5:25607006-25608916 REVERSE LENGTH=367
          Length = 367

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 74/85 (87%)

Query: 91  SRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQSLHHIGNVPNPY 150
           S IAD+++S+D+V  +L  AGLESSNLILGID TKSNEWTG++SFNR+SLH IG   NPY
Sbjct: 12  SYIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIGKRQNPY 71

Query: 151 EQAISIIGKTMAAFDEDNLIPCFGF 175
           E+AISIIG+T++ FDED+LIPCFGF
Sbjct: 72  EKAISIIGRTLSPFDEDDLIPCFGF 96


>AT5G63970.1 | Symbols:  | Copine (Calcium-dependent
           phospholipid-binding protein) family |
           chr5:25607006-25608916 REVERSE LENGTH=367
          Length = 367

 Score =  130 bits (327), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 60/85 (70%), Positives = 74/85 (87%)

Query: 91  SRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQSLHHIGNVPNPY 150
           S IAD+++S+D+V  +L  AGLESSNLILGID TKSNEWTG++SFNR+SLH IG   NPY
Sbjct: 12  SYIADHFSSLDQVITSLREAGLESSNLILGIDFTKSNEWTGRYSFNRKSLHAIGKRQNPY 71

Query: 151 EQAISIIGKTMAAFDEDNLIPCFGF 175
           E+AISIIG+T++ FDED+LIPCFGF
Sbjct: 72  EKAISIIGRTLSPFDEDDLIPCFGF 96


>AT1G79380.1 | Symbols:  | Ca(2)-dependent phospholipid-binding
           protein (Copine) family | chr1:29860812-29863023 FORWARD
           LENGTH=401
          Length = 401

 Score =  130 bits (326), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 58/95 (61%), Positives = 76/95 (80%)

Query: 81  DDKRRLERKYSRIADNYNSIDEVTEALARAGLESSNLILGIDCTKSNEWTGKHSFNRQSL 140
           D+    ++KY+ I D ++S+D+V++AL  AGLESSNLILG+D TKSNEWTGK SF+ + L
Sbjct: 44  DNTNATKKKYALIPDRFSSLDQVSKALREAGLESSNLILGVDFTKSNEWTGKTSFDGKCL 103

Query: 141 HHIGNVPNPYEQAISIIGKTMAAFDEDNLIPCFGF 175
           H +G   NPYE+AI +IG+T+A FDEDNLIPCFGF
Sbjct: 104 HALGETSNPYEKAIFVIGQTLAPFDEDNLIPCFGF 138