Miyakogusa Predicted Gene
- Lj0g3v0078919.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0078919.1 tr|G7KN55|G7KN55_MEDTR E3 ubiquitin-protein
ligase RGLG2 OS=Medicago truncatula GN=MTR_6g021730
PE=4,78.31,0,COPINE,NULL; seg,NULL; Copine,Copine,CUFF.4034.1
(528 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finge... 1005 0.0
gnl|LJGI|FS319939 similar to UniRef100_Q08ET6 Cluster: RING-fing... 747 0.0
gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosom... 84 1e-15
gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome... 84 1e-15
>gnl|LJGI|TC62262 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (21%)
Length = 808
Score = 1005 bits (507), Expect = 0.0
Identities = 523/527 (99%), Gaps = 1/527 (0%)
Strand = Plus / Plus
Query: 1 atggggggtcaaagttctaaggaggataataatttgaggcagaattcatctctgcgttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 atggggggtcaaagttctaaggaggataataatttgaggcagaattcatctctgcgttcg 315
Query: 61 agtgcctctcgttcttcttggagtccatatcctgacccgcattcgggttatggtcaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 agtgcctctcgttcttcttggagtccatatcctgacccgcattcgggttatggtcaaggg 375
Query: 121 ggttattcctatgacccacaacagccgccttcttatcctacacaagactattatgctccc 180
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 ggttattccgatgacccacaacagccgccttcttatcctacacaagactattatgctccc 435
Query: 181 ccacctcctccacaaaactatggctatgaacctcatgctagtggtagggtgactggccgt 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 436 ccacctcctccacaaaactatggctatgaacctcatgctactggtagggtgactggccgt 495
Query: 241 g-atgataagaggaggttagagaggaagtactcgagaatcgctgataattacaactccat 299
| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gtatgataaaaggaggttagagaggaagtactcgagaatcgctgataattacaactccat 555
Query: 300 agatgaggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttgg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 agatgaggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttgg 615
Query: 360 tattgattgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagctt 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tattgattgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagctt 675
Query: 420 gcatcacattgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 676 gcatcacattgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaac 735
Query: 480 catggctgcatttgatgaggataacttgattccttgttttggatttg 526
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 catggctgcatttgatgaggataacttgattccttgttttggatttg 782
>gnl|LJGI|FS319939 similar to UniRef100_Q08ET6 Cluster: RING-finger protein; n=1;
Capsicum annuum|Rep: RING-finger protein - Capsicum
annuum (Bell pepper), partial (8%)
Length = 712
Score = 747 bits (377), Expect = 0.0
Identities = 377/377 (100%)
Strand = Plus / Plus
Query: 1 atggggggtcaaagttctaaggaggataataatttgaggcagaattcatctctgcgttcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atggggggtcaaagttctaaggaggataataatttgaggcagaattcatctctgcgttcg 395
Query: 61 agtgcctctcgttcttcttggagtccatatcctgacccgcattcgggttatggtcaaggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 agtgcctctcgttcttcttggagtccatatcctgacccgcattcgggttatggtcaaggg 455
Query: 121 ggttattcctatgacccacaacagccgccttcttatcctacacaagactattatgctccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 ggttattcctatgacccacaacagccgccttcttatcctacacaagactattatgctccc 515
Query: 181 ccacctcctccacaaaactatggctatgaacctcatgctagtggtagggtgactggccgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 ccacctcctccacaaaactatggctatgaacctcatgctagtggtagggtgactggccgt 575
Query: 241 gatgataagaggaggttagagaggaagtactcgagaatcgctgataattacaactccata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gatgataagaggaggttagagaggaagtactcgagaatcgctgataattacaactccata 635
Query: 301 gatgaggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 gatgaggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggt 695
Query: 361 attgattgcactaagag 377
|||||||||||||||||
Sbjct: 696 attgattgcactaagag 712
>gnl|LJGI|GO026494 similar to UniRef100_A7PM08 Cluster: Chromosome chr14 scaffold_21,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr14 scaffold_21, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 692
Score = 83.8 bits (42), Expect = 1e-15
Identities = 177/222 (79%)
Strand = Plus / Plus
Query: 305 aggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggtattg 364
|||| ||||||||||||||| ||| || | |||||||||||||| ||| |||||||||
Sbjct: 412 aggtaactgaggctcttgcaaatgctggtttggagtcttccaatctcattgttggtattg 471
Query: 365 attgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagcttgcatc 424
||| || |||||||||||||||||||| |||||| | ||| | || | ||||
Sbjct: 472 attttacaaagagcaatgagtggacaggtgcaaggtcatttcaaagaagatgcctacatc 531
Query: 425 acattgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaaccatgg 484
|||| ||| ||| | |||||||||||||||||| ||||| || ||||||||||| |
Sbjct: 532 acatcgggcatgaacagaatccatatgaacaagctatatctatcattgggaaaacattat 591
Query: 485 ctgcatttgatgaggataacttgattccttgttttggatttg 526
| | |||||||| |||||||| ||||| |||| ||||||||
Sbjct: 592 cctcctttgatgaagataacttaattccctgttatggatttg 633
>gnl|LJGI|TC62168 similar to UniRef100_A7PCN7 Cluster: Chromosome chr17 scaffold_12,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr17 scaffold_12, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (69%)
Length = 907
Score = 83.8 bits (42), Expect = 1e-15
Identities = 177/222 (79%)
Strand = Plus / Plus
Query: 305 aggtgactgaggctcttgcacgtgcaggccttgagtcttccaatcttattcttggtattg 364
|||| ||||||||||||||| ||| || | |||||||||||||| ||| |||||||||
Sbjct: 330 aggtaactgaggctcttgcaaatgctggtttggagtcttccaatctcattgttggtattg 389
Query: 365 attgcactaagagcaatgagtggacaggaaagcattcatttaacagacaaagcttgcatc 424
||| || |||||||||||||||||||| |||||| | ||| | || | ||||
Sbjct: 390 attttacaaagagcaatgagtggacaggtgcaaggtcatttcaaagaagatgcctacatc 449
Query: 425 acattgggaatgttccgaatccatatgaacaagcaatatccattattgggaaaaccatgg 484
|||| ||| ||| | |||||||||||||||||| ||||| || ||||||||||| |
Sbjct: 450 acatcgggcatgaacagaatccatatgaacaagctatatctatcattgggaaaacattat 509
Query: 485 ctgcatttgatgaggataacttgattccttgttttggatttg 526
| | |||||||| |||||||| ||||| |||| ||||||||
Sbjct: 510 cctcctttgatgaagataacttaattccctgttatggatttg 551