Miyakogusa Predicted Gene

Lj0g3v0076359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0076359.1 Non Characterized Hit- tr|D5ACI0|D5ACI0_PICSI
Putative uncharacterized protein OS=Picea sitchensis
P,56.03,5e-19,seg,NULL,gene.g5618.t1.1
         (122 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g033620.1 | myb-like DNA-binding domain, shaqkyf class pro...   160   4e-40
Medtr8g063600.1 | myb-like transcription factor family protein |...    97   5e-21
Medtr8g063870.1 | myb-like transcription factor family protein |...    61   2e-10
Medtr4g111975.1 | MYB-like transcription factor family protein |...    51   3e-07

>Medtr1g033620.1 | myb-like DNA-binding domain, shaqkyf class
           protein | HC | chr1:12134107-12135768 | 20130731
          Length = 244

 Score =  160 bits (404), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 85/126 (67%), Positives = 95/126 (75%), Gaps = 6/126 (4%)

Query: 1   MNKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXXXXXXAFPTSTGVPGSGMY 60
           MNKDRRRSSIHDITSVNNGD++ PQGPI                  A P++TG+PG+GMY
Sbjct: 57  MNKDRRRSSIHDITSVNNGDVSTPQGPITGQTNGSSGNSAGKSVKQAVPSTTGLPGAGMY 116

Query: 61  ATPTIGQPIGGPLISAVGTPVNLPGAPPHMVY----PVPGALVPGAPMNMVPITYPMP-H 115
           A PTIGQPIGGPL+SAVGTPVNL  APPHM Y    PVPG +V GAP+NMVP+TYPMP H
Sbjct: 117 AAPTIGQPIGGPLVSAVGTPVNL-SAPPHMAYGIRAPVPGTVVSGAPVNMVPMTYPMPHH 175

Query: 116 TSAPHR 121
           TSAPHR
Sbjct: 176 TSAPHR 181


>Medtr8g063600.1 | myb-like transcription factor family protein | HC
           | chr8:26556670-26553511 | 20130731
          Length = 290

 Score = 96.7 bits (239), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 62/129 (48%), Positives = 75/129 (58%), Gaps = 13/129 (10%)

Query: 2   NKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXXXXXXAFPT-STGV------ 54
            K+RRRSSIHD+T V NGDI+APQGPI                  A P    G+      
Sbjct: 161 KKERRRSSIHDVTFVKNGDISAPQGPITGQASNSAANSAGQSAEQAPPVPPAGIKTLDNP 220

Query: 55  --PGSGMYATPTIGQPIGGPLISAVGTPVNLPGAPPHMVY---PVPGALVPGAPMNMVPI 109
             P +G++A P IGQPIGGP++SAVGT VNL  AP  M Y   PV   ++PG PMN+ P+
Sbjct: 221 PSPPAGIHAAPRIGQPIGGPVVSAVGTTVNLT-APGDMDYGLGPVSETVMPGVPMNLGPM 279

Query: 110 TYPMPHTSA 118
           TY M HT A
Sbjct: 280 TYAMLHTYA 288


>Medtr8g063870.1 | myb-like transcription factor family protein | LC
           | chr8:26776011-26777328 | 20130731
          Length = 273

 Score = 61.2 bits (147), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 59/133 (44%), Gaps = 24/133 (18%)

Query: 2   NKDRRRSSIHDITSVNNGDIAAPQGPIXXXXXXXXXXXXXX--XXXXAFPTSTGVP---- 55
            K+RRRSS HD+T V NGDI+AP G I                    A   +   P    
Sbjct: 147 KKERRRSSRHDVTYVENGDISAPHGAITGQASDYARQSATQTPQAPSAGTRTLNDPPVPP 206

Query: 56  ----------GSGMYATPTIGQPIGGPLISAVGTPVNLPGAPPHMVYPVPGALVPGAPMN 105
                     G G+YA   IGQPIGG   +        PG   + + PV    +PG PMN
Sbjct: 207 AGMYVVTPPSGVGVYAAHRIGQPIGGRNCT--------PGQMAYGIGPVSWTSMPGVPMN 258

Query: 106 MVPITYPMPHTSA 118
           + P+T+PM +T A
Sbjct: 259 LGPMTFPMQNTYA 271


>Medtr4g111975.1 | MYB-like transcription factor family protein | HC
           | chr4:46325032-46326931 | 20130731
          Length = 303

 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 50/102 (49%), Gaps = 32/102 (31%)

Query: 1   MNKDRRRSSIHDITSVNNGDIAAP-QGPIXXXXXXXXXXXXXXXXXXAFPTST-GV---- 54
           MN+DRRRSSIHDITSVNNGD+A+  Q PI                    P++T G+    
Sbjct: 190 MNRDRRRSSIHDITSVNNGDVASNHQAPI------------TGQHGNTLPSNTMGLGQSM 237

Query: 55  ----------PGSGMYATPTIGQPIGGP---LISAVGTPVNL 83
                      G GMY  P +G P   P   + SAVGTPV L
Sbjct: 238 KHRVQPHHPPGGLGMYGAP-VGHPFVAPPAHMASAVGTPVML 278