Miyakogusa Predicted Gene

Lj0g3v0072399.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0072399.2 Non Characterized Hit- tr|I1MIX6|I1MIX6_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,88.94,0,no
description,Terpenoid synthase; POLYPRENYL_SYNTHASE_2,Polyprenyl
synthetase; POLYPRENYL_SYNTHASE_,CUFF.3576.2
         (419 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g072470.1 | solanesyl diphosphate synthase | HC | chr2:305...   753   0.0  
Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC | c...   241   9e-64
Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC | c...   161   1e-39
Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC | c...   137   2e-32
Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC | c...   133   3e-31

>Medtr2g072470.1 | solanesyl diphosphate synthase | HC |
           chr2:30511132-30506990 | 20130731
          Length = 421

 Score =  753 bits (1943), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 371/422 (87%), Positives = 395/422 (93%), Gaps = 4/422 (0%)

Query: 1   MMTVTSSSIDFAGKNLVYCGCSSNASFDRYTVRNYQKLNSKGCG--ARKSICCKRKST-Q 57
           MM+VTS SIDF GKNLVYCGCSSNASF RY V+NY K+NSKGCG  ARK +CCK+++T Q
Sbjct: 1   MMSVTSKSIDFFGKNLVYCGCSSNASFHRYEVKNYAKVNSKGCGNGARKLVCCKKRNTHQ 60

Query: 58  CKVSSMKTAEPALNGGTQAIKGLTGRLDLKSSSSETPISPARLFEVVADDLLTLNKNLQS 117
            +VSSM TAEP LNGGTQAIK L   L+LKS  + TPISP RLFEVV+DDLLTLNKNLQS
Sbjct: 61  YRVSSMDTAEPTLNGGTQAIKDLAKGLNLKSYPA-TPISPNRLFEVVSDDLLTLNKNLQS 119

Query: 118 IVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLKELTLKHRRLAEIIEMIH 177
           IVGAENPVL+SAAEQIFSAGGKRMRPALVFLVSRATAEL GL++LT+KHRRLAEI+EMIH
Sbjct: 120 IVGAENPVLISAAEQIFSAGGKRMRPALVFLVSRATAELHGLEDLTVKHRRLAEIVEMIH 179

Query: 178 TASLIHDDVLDESDLRRGKETVHQLFGTRVAVLAGDFMFAQSSWYLANLEKIEVIKLISQ 237
           TASLIHDDVLDESDLRRGKETVHQ+FGTRVAVLAGDFMFAQSSWYLANLE IEVIKLISQ
Sbjct: 180 TASLIHDDVLDESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQ 239

Query: 238 VIKDFASGEIKQASSLFDCDVQLEEYLIKSYYKTASLIAASTKGAAIFSGADHSITEKMY 297
           VIKDFASGEIKQASSLFDCDVQL+EYLIKSY+KTASLIAAS KGAA+FSG+D S+TEKM+
Sbjct: 240 VIKDFASGEIKQASSLFDCDVQLDEYLIKSYFKTASLIAASVKGAAVFSGSDSSMTEKMF 299

Query: 298 EYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESE 357
           EYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESE
Sbjct: 300 EYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESE 359

Query: 358 FSETGSLDEAITLVKSCGGIERAQELAKEKADLAIQSLQCLPQSVFRLALEDMVTYNLQR 417
           FSE GSLDEAI LVKSCGGIERAQELAKEKADLAIQSLQCLP SV+RLALEDMVTYNLQR
Sbjct: 360 FSEIGSLDEAIKLVKSCGGIERAQELAKEKADLAIQSLQCLPPSVYRLALEDMVTYNLQR 419

Query: 418 IA 419
           IA
Sbjct: 420 IA 421


>Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr4:39596236-39604873 | 20130731
          Length = 417

 Score =  241 bits (615), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 134/328 (40%), Positives = 207/328 (63%), Gaps = 17/328 (5%)

Query: 88  SSSSETPISPARLFEVVADDLLTLNKNLQSIVGAENPVLMSAAEQIFSAG--GKRMRPAL 145
           SS  E  + P   F +VAD+L  +   L+ +V A+ P L SAAE  F  G  GKR RP +
Sbjct: 69  SSLVEDELDP---FSLVADELSFIGNKLREMVVAKVPKLASAAEYFFKMGVEGKRFRPTV 125

Query: 146 VFLVSRA----------TAELLGLKELTLKHR--RLAEIIEMIHTASLIHDDVLDESDLR 193
           + L+S A            EL G     L+ R  R+AEI EMIH ASL+HDDVLD++D R
Sbjct: 126 LLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIAEITEMIHVASLLHDDVLDDADTR 185

Query: 194 RGKETVHQLFGTRVAVLAGDFMFAQSSWYLANLEKIEVIKLISQVIKDFASGEIKQASSL 253
           RG  +++ + G ++AVLAGDF+ +++   LA+L+  EV+ L+++V++   +GEI Q ++ 
Sbjct: 186 RGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAEVVEHLVTGEIMQMTTT 245

Query: 254 FDCDVQLEEYLIKSYYKTASLIAASTKGAAIFSGADHSITEKMYEYGKNLGLSFQVVDDI 313
            D    +E Y+ K+YYKTASLI+ S K  AI +G    +    +EYGKNLGL+FQ++DD+
Sbjct: 246 SDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLGLAFQLIDDV 305

Query: 314 LDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSETGSLDEAITLVKS 373
           LDFT ++  LGK + +D+  G +TAP++FA+E+ P+LR I+E  F    +++ A+  +  
Sbjct: 306 LDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPENVNIALDYLGK 365

Query: 374 CGGIERAQELAKEKADLAIQSLQCLPQS 401
             GI++ +ELA + A LA +++  LP++
Sbjct: 366 SRGIQKTKELAMKHASLAAEAIDSLPEN 393


>Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC |
           chr4:39596236-39604873 | 20130731
          Length = 490

 Score =  161 bits (408), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 139/230 (60%), Gaps = 17/230 (7%)

Query: 88  SSSSETPISPARLFEVVADDLLTLNKNLQSIVGAENPVLMSAAEQIFSAG--GKRMRPAL 145
           SS  E  + P   F +VAD+L  +   L+ +V A+ P L SAAE  F  G  GKR RP +
Sbjct: 69  SSLVEDELDP---FSLVADELSFIGNKLREMVVAKVPKLASAAEYFFKMGVEGKRFRPTV 125

Query: 146 VFLVSRA----------TAELLGLKELTLKHR--RLAEIIEMIHTASLIHDDVLDESDLR 193
           + L+S A            EL G     L+ R  R+AEI EMIH ASL+HDDVLD++D R
Sbjct: 126 LLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIAEITEMIHVASLLHDDVLDDADTR 185

Query: 194 RGKETVHQLFGTRVAVLAGDFMFAQSSWYLANLEKIEVIKLISQVIKDFASGEIKQASSL 253
           RG  +++ + G ++AVLAGDF+ +++   LA+L+  EV+ L+++V++   +GEI Q ++ 
Sbjct: 186 RGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAEVVEHLVTGEIMQMTTT 245

Query: 254 FDCDVQLEEYLIKSYYKTASLIAASTKGAAIFSGADHSITEKMYEYGKNL 303
            D    +E Y+ K+YYKTASLI+ S K  AI +G    +    +EYGKNL
Sbjct: 246 SDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNL 295



 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 38/98 (38%), Positives = 68/98 (69%)

Query: 304 GLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSETGS 363
           GL+FQ++DD+LDFT ++  LGK + +D+  G +TAP++FA+E+ P+LR I+E  F    +
Sbjct: 369 GLAFQLIDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPEN 428

Query: 364 LDEAITLVKSCGGIERAQELAKEKADLAIQSLQCLPQS 401
           ++ A+  +    GI++ +ELA + A LA +++  LP++
Sbjct: 429 VNIALDYLGKSRGIQKTKELAMKHASLAAEAIDSLPEN 466


>Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr8:33275574-33277440 | 20130731
          Length = 372

 Score =  137 bits (345), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 93/248 (37%), Positives = 133/248 (53%), Gaps = 18/248 (7%)

Query: 111 LNKNLQSIVGAENPVLMSAAEQI-FSAGGKRMRPALVFLVSRATAELLGLKELTLKHRRL 169
           +NK L   V    P+ +  A +    AGGKR+RP L      A  EL+G  E        
Sbjct: 92  VNKALDDAVSLREPLKVHEAMRYSLLAGGKRVRPVLCL----AACELVGGTEPMAMPAAC 147

Query: 170 AEIIEMIHTASLIHDDV--LDESDLRRGKETVHQLFGTRVAVLAGDFMFAQSSWYLA--- 224
           A  +EMIHT SLIHDD+  +D  DLRRGK T H++FG  VAVLAGD + A +  ++A   
Sbjct: 148 A--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVST 205

Query: 225 -NLEKIEVIKLISQVIKDFAS-----GEIKQASSLFDCDVQLEEYLIKSYYKTASLIAAS 278
            ++    +++ I ++ K   S     G++   +S    DV LE       +KTA+L+  +
Sbjct: 206 VDVSPARIVRAIGELAKSIGSEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGA 265

Query: 279 TKGAAIFSGADHSITEKMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTA 338
               AI  G      EK+ ++   +GL FQVVDDILD T+S+++LGK AG DL    +T 
Sbjct: 266 VVLGAILGGGSDEDVEKLRKFATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTY 325

Query: 339 PVIFALEK 346
           P +  +EK
Sbjct: 326 PKLLGIEK 333


>Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC |
           chr5:7341789-7340535 | 20130731
          Length = 371

 Score =  133 bits (335), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 96/254 (37%), Positives = 132/254 (51%), Gaps = 18/254 (7%)

Query: 111 LNKNL-QSIVGAENPVLMSAAEQIFSAGGKRMRPALVFLVSRATAELLGLKELTLKHRRL 169
           +NK L ++IV  E   +  A      AGGKR+RP L      A   L+G KE        
Sbjct: 91  VNKALDEAIVLQEPEKIYEAMRYSLLAGGKRVRPVLCI----AACGLVGGKEEASIPSAC 146

Query: 170 AEIIEMIHTASLIHDDV--LDESDLRRGKETVHQLFGTRVAVLAGD----FMFAQSSWYL 223
           A  +EMIHT SLIHDD+  +D  DLRRGK T H+++G  VAVLAGD    F F   +   
Sbjct: 147 A--VEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVAVLAGDALLSFAFEHVAVST 204

Query: 224 ANLEKIEVIKLISQVIK-----DFASGEIKQASSLFDCDVQLEEYLIKSYYKTASLIAAS 278
             +    +++ I+++ K        +G+I    S    +V LE        KTA+L+ A+
Sbjct: 205 IGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVGLETLEFIHLRKTAALLEAA 264

Query: 279 TKGAAIFSGADHSITEKMYEYGKNLGLSFQVVDDILDFTQSAEQLGKPAGTDLAKGNLTA 338
               AI  G      EK+ ++ + +GL FQVVDDILD T+S+E+LGK AG DL     T 
Sbjct: 265 VVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKSSEELGKTAGKDLTADKATY 324

Query: 339 PVIFALEKEPKLRD 352
           P +  LEK  +  D
Sbjct: 325 PKLLGLEKSKEFAD 338