Miyakogusa Predicted Gene

Lj0g3v0071459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0071459.1 Non Characterized Hit- tr|I1MQ79|I1MQ79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.54,0,zf-HIT,Zinc
finger, HIT-type; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
HIT/MYND zinc finger-l,CUFF.3500.1
         (277 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g463300.1 | HIT zinc finger protein | HC | chr6:21892067-2...   428   e-120

>Medtr6g463300.1 | HIT zinc finger protein | HC |
           chr6:21892067-21886554 | 20130731
          Length = 426

 Score =  428 bits (1100), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 208/282 (73%), Positives = 234/282 (82%), Gaps = 5/282 (1%)

Query: 1   MSASPSRMEGGGGQVSIKP-----ALCEECKSNASKYKCPGCSVRSCSLPCVKAHKVRTG 55
           MS S S+ +     VSIK        CEECKSN SKYKCPGCS++SCSLPCVKAHK RTG
Sbjct: 1   MSTSVSQRKEQVENVSIKAIPKGLTKCEECKSNPSKYKCPGCSIQSCSLPCVKAHKTRTG 60

Query: 56  CTGKRNRTQFVPLSQFDDSVLLSDYNLLEEVKRVAESAQRMRTKLRLYPYFKLPYPLKSL 115
           CTGKRN+TQFVP+SQFDDS+LLSDYNLLEEVKRVAE+A R RTKL LY YFKLP+ LKSL
Sbjct: 61  CTGKRNQTQFVPISQFDDSILLSDYNLLEEVKRVAEAASRTRTKLGLYTYFKLPHYLKSL 120

Query: 116 GSAAASRRTKLLFLPSRMSKREMNQTRYDQRKKAISWTIEWRFHSTDIVLHDHGVDENSS 175
             AA SR TKLLFLP+ MSKRE N++RYD RKK+I WTIE RFHST +VLHDHGV+EN+S
Sbjct: 121 QHAAGSRSTKLLFLPNGMSKRENNRSRYDHRKKSIHWTIELRFHSTKVVLHDHGVNENTS 180

Query: 176 LCSILEKHLKPGPWNHQLREFCVDQIDCLKLFIRKYPKGPRSPFKELDMKAPIRQQLANI 235
             SILEKHLKP PWNHQL+EFC DQ+DCLKLFIRKYPKGP+SPFKELDM API+QQL N+
Sbjct: 181 FRSILEKHLKPSPWNHQLKEFCDDQLDCLKLFIRKYPKGPKSPFKELDMNAPIKQQLGNV 240

Query: 236 VILEFPVVFVFFPSHNINFEVVKDVNSSIHKSQQQDDESNQS 277
           VILE+PVVFVF PSH+INFEV+K VN S+ KS  +D E N S
Sbjct: 241 VILEYPVVFVFLPSHSINFEVIKKVNPSLPKSLPKDSEVNLS 282