Miyakogusa Predicted Gene

Lj0g3v0071459.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0071459.1 Non Chatacterized Hit- tr|I1MQ79|I1MQ79_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.54,0,zf-HIT,Zinc
finger, HIT-type; SUBFAMILY NOT NAMED,NULL; UNCHARACTERIZED,NULL;
HIT/MYND zinc finger-l,CUFF.3500.1
         (277 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT1G04945.2 | Symbols:  | HIT-type Zinc finger family protein | ...   350   6e-97
AT1G04945.1 | Symbols:  | HIT-type Zinc finger family protein | ...   350   6e-97
AT1G04945.3 | Symbols:  | HIT-type Zinc finger family protein | ...   348   3e-96

>AT1G04945.2 | Symbols:  | HIT-type Zinc finger family protein |
           chr1:1400969-1402651 FORWARD LENGTH=392
          Length = 392

 Score =  350 bits (898), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 164/248 (66%), Positives = 203/248 (81%), Gaps = 1/248 (0%)

Query: 17  IKPALCEECKSNASKYKCPGCSVRSCSLPCVKAHKVRTGCTGKRNRTQFVPLSQFDDSVL 76
           +K ++CEECK N  KYKCPGCS+RSC+LPCVKAHK RTGCTGKR  T  VPLS+FDD++L
Sbjct: 1   MKDSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLL 60

Query: 77  LSDYNLLEEVKRVAESAQRMRTKLRLYPY-FKLPYPLKSLGSAAASRRTKLLFLPSRMSK 135
           LSDYN+LEE KRVAESA R R++L    Y +KLPY LKSL SAA SRRTKL +LPS M K
Sbjct: 61  LSDYNMLEETKRVAESALRRRSQLCKNHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLK 120

Query: 136 REMNQTRYDQRKKAISWTIEWRFHSTDIVLHDHGVDENSSLCSILEKHLKPGPWNHQLRE 195
           RE NQ+RYD R K ISWTIEWRFHSTD++L DHGV E+ +LCS+++ HLKPGPW H+L+ 
Sbjct: 121 RENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKP 180

Query: 196 FCVDQIDCLKLFIRKYPKGPRSPFKELDMKAPIRQQLANIVILEFPVVFVFFPSHNINFE 255
           FC   +D LKLFIR+YPKG ++PFKELD+KAP+R+QLA +VILE+PV+ V+ PS +  F+
Sbjct: 181 FCDVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFK 240

Query: 256 VVKDVNSS 263
           V+KD N++
Sbjct: 241 VIKDFNTT 248


>AT1G04945.1 | Symbols:  | HIT-type Zinc finger family protein |
           chr1:1400969-1402651 FORWARD LENGTH=367
          Length = 367

 Score =  350 bits (898), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 164/248 (66%), Positives = 203/248 (81%), Gaps = 1/248 (0%)

Query: 17  IKPALCEECKSNASKYKCPGCSVRSCSLPCVKAHKVRTGCTGKRNRTQFVPLSQFDDSVL 76
           +K ++CEECK N  KYKCPGCS+RSC+LPCVKAHK RTGCTGKR  T  VPLS+FDD++L
Sbjct: 1   MKDSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNLL 60

Query: 77  LSDYNLLEEVKRVAESAQRMRTKLRLYPY-FKLPYPLKSLGSAAASRRTKLLFLPSRMSK 135
           LSDYN+LEE KRVAESA R R++L    Y +KLPY LKSL SAA SRRTKL +LPS M K
Sbjct: 61  LSDYNMLEETKRVAESALRRRSQLCKNHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGMLK 120

Query: 136 REMNQTRYDQRKKAISWTIEWRFHSTDIVLHDHGVDENSSLCSILEKHLKPGPWNHQLRE 195
           RE NQ+RYD R K ISWTIEWRFHSTD++L DHGV E+ +LCS+++ HLKPGPW H+L+ 
Sbjct: 121 RENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLKP 180

Query: 196 FCVDQIDCLKLFIRKYPKGPRSPFKELDMKAPIRQQLANIVILEFPVVFVFFPSHNINFE 255
           FC   +D LKLFIR+YPKG ++PFKELD+KAP+R+QLA +VILE+PV+ V+ PS +  F+
Sbjct: 181 FCDVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEFK 240

Query: 256 VVKDVNSS 263
           V+KD N++
Sbjct: 241 VIKDFNTT 248


>AT1G04945.3 | Symbols:  | HIT-type Zinc finger family protein |
           chr1:1399588-1402651 FORWARD LENGTH=644
          Length = 644

 Score =  348 bits (892), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 163/249 (65%), Positives = 203/249 (81%), Gaps = 1/249 (0%)

Query: 16  SIKPALCEECKSNASKYKCPGCSVRSCSLPCVKAHKVRTGCTGKRNRTQFVPLSQFDDSV 75
           ++  ++CEECK N  KYKCPGCS+RSC+LPCVKAHK RTGCTGKR  T  VPLS+FDD++
Sbjct: 252 ALADSVCEECKQNPWKYKCPGCSIRSCALPCVKAHKQRTGCTGKRKFTDVVPLSKFDDNL 311

Query: 76  LLSDYNLLEEVKRVAESAQRMRTKLRLYPY-FKLPYPLKSLGSAAASRRTKLLFLPSRMS 134
           LLSDYN+LEE KRVAESA R R++L    Y +KLPY LKSL SAA SRRTKL +LPS M 
Sbjct: 312 LLSDYNMLEETKRVAESALRRRSQLCKNHYSYKLPYLLKSLQSAAYSRRTKLWYLPSGML 371

Query: 135 KREMNQTRYDQRKKAISWTIEWRFHSTDIVLHDHGVDENSSLCSILEKHLKPGPWNHQLR 194
           KRE NQ+RYD R K ISWTIEWRFHSTD++L DHGV E+ +LCS+++ HLKPGPW H+L+
Sbjct: 372 KRENNQSRYDNRSKCISWTIEWRFHSTDVILVDHGVGEDRNLCSVIKNHLKPGPWIHKLK 431

Query: 195 EFCVDQIDCLKLFIRKYPKGPRSPFKELDMKAPIRQQLANIVILEFPVVFVFFPSHNINF 254
            FC   +D LKLFIR+YPKG ++PFKELD+KAP+R+QLA +VILE+PV+ V+ PS +  F
Sbjct: 432 PFCDVDLDSLKLFIRQYPKGAKAPFKELDIKAPLRKQLAKVVILEYPVIHVYLPSQSYEF 491

Query: 255 EVVKDVNSS 263
           +V+KD N++
Sbjct: 492 KVIKDFNTT 500