Miyakogusa Predicted Gene

Lj0g3v0069309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069309.1 Non Chatacterized Hit- tr|I1HY90|I1HY90_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.09,9e-19,seg,NULL,CUFF.3315.1
         (162 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma07g20070.1                                                       231   4e-61
Glyma20g00930.1                                                       187   5e-48

>Glyma07g20070.1 
          Length = 384

 Score =  231 bits (588), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 118/165 (71%), Positives = 130/165 (78%), Gaps = 3/165 (1%)

Query: 1   MEKLAPGRSFGTLLAKTENRAPXXXXXXXXX--XXXXXXXGTSLSIYKDSAATGETYSQQ 58
           +EKLAP RSFGT+LAK ENRAP                     LSIYKDSA TG+T   +
Sbjct: 220 VEKLAPTRSFGTVLAKGENRAPLSILNSNRDPCAKNDRTRAAPLSIYKDSADTGDTDPHK 279

Query: 59  SDISQPWHTLGARAERNKENNAIPGKWKSFKIPQRPGTISGAATASA-IPVFIDEECQDS 117
            D+S  WHTLGARA+RNKENNAIPGKWKS+KIPQRPGT +G ATASA IPVF+DEECQDS
Sbjct: 280 PDLSHSWHTLGARADRNKENNAIPGKWKSYKIPQRPGTRTGGATASAFIPVFVDEECQDS 339

Query: 118 QSMKAEGCKSSSLKIRQEDDKDLKSETELLRKNPLRNFPKNSLPR 162
           QS KAEGCKSS+LKIRQEDDK+LK ETELLRKNPLRNFP+NSLPR
Sbjct: 340 QSKKAEGCKSSNLKIRQEDDKELKRETELLRKNPLRNFPQNSLPR 384


>Glyma20g00930.1 
          Length = 397

 Score =  187 bits (474), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/144 (68%), Positives = 107/144 (74%), Gaps = 3/144 (2%)

Query: 1   MEKLAPGRSFGTLLAKTENRAPXXXXXXXX--XXXXXXXXGTSLSIYKDSAATGETYSQQ 58
           +EKLAP RSFGT+LAK ENRAP                     LSIYKDSA TG+T   +
Sbjct: 220 VEKLAPTRSFGTVLAKGENRAPLSILNSNRDPSAKNDRTRAAPLSIYKDSADTGDTDPHK 279

Query: 59  SDISQPWHTLGARAERNKENNAIPGKWKSFKIPQRPGTISGAATASA-IPVFIDEECQDS 117
            D S  WHTLGARA+RNKENNAIPGKWKS+K+PQRPGT  G AT SA IPVF+DEECQDS
Sbjct: 280 PDPSHSWHTLGARADRNKENNAIPGKWKSYKVPQRPGTRVGGATPSAFIPVFVDEECQDS 339

Query: 118 QSMKAEGCKSSSLKIRQEDDKDLK 141
           QS KAEGCKSSSLKIRQEDDK+LK
Sbjct: 340 QSKKAEGCKSSSLKIRQEDDKELK 363