Miyakogusa Predicted Gene

Lj0g3v0069309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0069309.1 Non Chatacterized Hit- tr|I1HY90|I1HY90_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,43.09,9e-19,seg,NULL,CUFF.3315.1
         (162 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT2G33560.2 | Symbols: BUBR1 | BUB1-related (BUB1: budding uninh...    99   1e-21
AT2G33560.1 | Symbols: BUBR1 | BUB1-related (BUB1: budding uninh...    99   1e-21

>AT2G33560.2 | Symbols: BUBR1 | BUB1-related (BUB1: budding
           uninhibited by benzymidazol 1) | chr2:14213810-14215918
           REVERSE LENGTH=396
          Length = 396

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 14/171 (8%)

Query: 6   PGRSFGTLLAKTENRAPXXXXXXXXXXXXX----XXXGTSLSIYKDSAATGETYSQ-QSD 60
           P RSFGTLL++ +N A                      T  +IY D+ +   + +Q +SD
Sbjct: 226 PSRSFGTLLSRGDNNARRQALGSSNPQAKKLKPNQSSKTPFAIYADAVSDTTSGNQPESD 285

Query: 61  ISQP----WHTLGARAERNKENNAIPGKWKSFKIPQRPGT-ISGAATASAIPVFIDEECQ 115
            S+P    W  LG RAERNKENN++P KW SFK+PQ+P      AA+AS   VF+DEE  
Sbjct: 286 KSRPEFGSWLMLGGRAERNKENNSLPRKWASFKVPQKPIVRTVAAASASTFEVFVDEEEC 345

Query: 116 DSQSMKAEG----CKSSSLKIRQEDDKDLKSETELLRKNPLRNFPKNSLPR 162
             +  + +       SSS  +     +++K ETELLR+NPLR+FP NS  R
Sbjct: 346 TEEEEEKKKNDETISSSSNVLPLNGGREIKKETELLRQNPLRHFPPNSFLR 396


>AT2G33560.1 | Symbols: BUBR1 | BUB1-related (BUB1: budding
           uninhibited by benzymidazol 1) | chr2:14213810-14215918
           REVERSE LENGTH=395
          Length = 395

 Score = 99.0 bits (245), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 14/171 (8%)

Query: 6   PGRSFGTLLAKTENRAPXXXXXXXXXXXXX----XXXGTSLSIYKDSAATGETYSQ-QSD 60
           P RSFGTLL++ +N A                      T  +IY D+ +   + +Q +SD
Sbjct: 225 PSRSFGTLLSRGDNNARRQALGSSNPQAKKLKPNQSSKTPFAIYADAVSDTTSGNQPESD 284

Query: 61  ISQP----WHTLGARAERNKENNAIPGKWKSFKIPQRPGT-ISGAATASAIPVFIDEECQ 115
            S+P    W  LG RAERNKENN++P KW SFK+PQ+P      AA+AS   VF+DEE  
Sbjct: 285 KSRPEFGSWLMLGGRAERNKENNSLPRKWASFKVPQKPIVRTVAAASASTFEVFVDEEEC 344

Query: 116 DSQSMKAEG----CKSSSLKIRQEDDKDLKSETELLRKNPLRNFPKNSLPR 162
             +  + +       SSS  +     +++K ETELLR+NPLR+FP NS  R
Sbjct: 345 TEEEEEKKKNDETISSSSNVLPLNGGREIKKETELLRQNPLRHFPPNSFLR 395