Miyakogusa Predicted Gene

Lj0g3v0068089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068089.1 tr|A2Q457|A2Q457_MEDTR Peptidase aspartic, active
site OS=Medicago truncatula
GN=MtrDRAFT_AC155896g2,39.13,0.000000000000003,coiled-coil,NULL;
seg,NULL,CUFF.3236.1
         (126 letters)

Database: trembl 
           41,451,118 sequences; 13,208,986,710 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

A2Q2C7_MEDTR (tr|A2Q2C7) RNA-directed DNA polymerase (Reverse tr...    97   2e-18
A2Q457_MEDTR (tr|A2Q457) Peptidase aspartic, active site OS=Medi...    79   6e-13
A2Q455_MEDTR (tr|A2Q455) Peptidase aspartic, active site OS=Medi...    79   7e-13
G7ZWU5_MEDTR (tr|G7ZWU5) Pentatricopeptide repeat-containing pro...    69   4e-10
B7FK60_MEDTR (tr|B7FK60) Uncharacterized protein OS=Medicago tru...    60   3e-07

>A2Q2C7_MEDTR (tr|A2Q2C7) RNA-directed DNA polymerase (Reverse transcriptase);
           Chromo; Zinc finger, CCHC-type; Peptidase aspartic,
           active site; Polynucleotidyl transferase, Ribonuclease H
           fold OS=Medicago truncatula GN=MtrDRAFT_AC150244g37v2
           PE=4 SV=1
          Length = 1297

 Score = 97.1 bits (240), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/123 (41%), Positives = 71/123 (57%), Gaps = 7/123 (5%)

Query: 7   EKGEQRDDKMNNPRTPPRDRGVRHLPYQELLDRRQKGLCFKCGGKYHPLHQCPDRQLKIM 66
           EK  Q D K    ++ PRDR   HL Y EL++R+QKGLCFKCGG +HP+HQCPD+QL+++
Sbjct: 79  EKQAQYDKK----KSGPRDRSFTHLSYNELMERKQKGLCFKCGGPFHPMHQCPDKQLRVL 134

Query: 67  VLDXXXXXXXXXXXXXXXXXSQVDG---ACSIMVMGTEPIQTHTMKLLGSIYGVPVVILV 123
           VL+                  + +G    C +        +  ++KL+G I  VPVV+LV
Sbjct: 135 VLEEDEEGEPEGKLLAVEVDDEEEGDGEMCMMEFFHLGHSRPQSIKLMGVIKEVPVVVLV 194

Query: 124 DSG 126
           DSG
Sbjct: 195 DSG 197


>A2Q457_MEDTR (tr|A2Q457) Peptidase aspartic, active site OS=Medicago truncatula
           GN=MtrDRAFT_AC155896g21v2 PE=4 SV=1
          Length = 435

 Score = 79.0 bits (193), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 12/115 (10%)

Query: 24  RDRGVRHLPYQELLDRRQKGLCFKCGGKYHPLHQCPDRQLKIMVLDXXXXXXXXXXXXXX 83
           RD+ VR L  QE+ DRRQKGLCFKCGG YHP HQCPD+ L +MVL+              
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSEDENEVRVLND 102

Query: 84  XXXSQVDGACSIMVMGTEPIQT------------HTMKLLGSIYGVPVVILVDSG 126
                      + V+  E   T              ++  G +  +PV++LVDSG
Sbjct: 103 EDVDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVDSG 157


>A2Q455_MEDTR (tr|A2Q455) Peptidase aspartic, active site OS=Medicago truncatula
           GN=MtrDRAFT_AC155896g19v2 PE=4 SV=1
          Length = 435

 Score = 78.6 bits (192), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 12/115 (10%)

Query: 24  RDRGVRHLPYQELLDRRQKGLCFKCGGKYHPLHQCPDRQLKIMVLDXXXXXXXXXXXXXX 83
           RD+ VR L  QE+ DRRQKGLCFKCGG YHP HQCPD+ L +MVL+              
Sbjct: 43  RDKNVRSLSSQEIADRRQKGLCFKCGGPYHPRHQCPDKNLSVMVLEDDSEDENEVRVLND 102

Query: 84  XXXSQVDGACSIMVMGTEPIQT------------HTMKLLGSIYGVPVVILVDSG 126
                      + V+  E   T              ++  G +  +PV++LVDSG
Sbjct: 103 EDVDTGAEELQLNVLTFENALTFDRQTEYYQDRFQCIRFQGKVREIPVLMLVDSG 157


>G7ZWU5_MEDTR (tr|G7ZWU5) Pentatricopeptide repeat-containing protein OS=Medicago
            truncatula GN=MTR_045s0033 PE=4 SV=1
          Length = 1280

 Score = 69.3 bits (168), Expect = 4e-10,   Method: Composition-based stats.
 Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 10/112 (8%)

Query: 24   RDRGVRHLPYQELLDRRQKGLCFKCGGKYHP-LHQCPDRQLKIMVLDXXXXX-------X 75
            R +GVR +   E+ +RR KGLCFKCGGKYHP LH+CP++ L++++L              
Sbjct: 920  RWKGVRSIQNGEMAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVS 979

Query: 76   XXXXXXXXXXXSQVDGACSIM-VMGTEPIQTHTMKLLGSIYGVPVVILVDSG 126
                        +++  C ++ V+G+   + +TMK+ G +  + VV+LVDSG
Sbjct: 980  LETQEVLEEEEEEIESECKVIGVLGSMG-EYNTMKIGGKLENIDVVVLVDSG 1030


>B7FK60_MEDTR (tr|B7FK60) Uncharacterized protein OS=Medicago truncatula PE=2
           SV=1
          Length = 185

 Score = 59.7 bits (143), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 10/100 (10%)

Query: 36  LLDRRQKGLCFKCGGKYHP-LHQCPDRQLKIMVLDXXXX-------XXXXXXXXXXXXXS 87
           + +RR KGLCFKCGGKYHP LH+CP++ L++++L                          
Sbjct: 1   MAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEE 60

Query: 88  QVDGACSIM-VMGTEPIQTHTMKLLGSIYGVPVVILVDSG 126
           +++  C ++ V+G+   + +TMK+ G +  + VV+LVDSG
Sbjct: 61  EIESECKVIGVLGSMG-EYNTMKIGGKLENIDVVVLVDSG 99