Miyakogusa Predicted Gene

Lj0g3v0068089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068089.1 tr|A2Q457|A2Q457_MEDTR Peptidase aspartic, active
site OS=Medicago truncatula
GN=MtrDRAFT_AC155896g2,39.13,0.000000000000003,coiled-coil,NULL;
seg,NULL,CUFF.3236.1
         (126 letters)

Database: Glyma1.pep 
           75,778 sequences; 25,431,882 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Glyma06g41410.1                                                        74   5e-14

>Glyma06g41410.1 
          Length = 1534

 Score = 73.6 bits (179), Expect = 5e-14,   Method: Composition-based stats.
 Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 8/109 (7%)

Query: 26  RGVRHLPYQELLDRRQKGLCFKCGGKYHPLHQCPDRQLKIMVLDXXXXXXXXXXXXXXXX 85
           RGVRHLP  E+ +RR KGLCF+C  ++ PLHQC  +QL++++L                 
Sbjct: 353 RGVRHLPAAEMNERRSKGLCFRCNERWDPLHQCATKQLRVIILGDDEAINDEGEIVVLET 412

Query: 86  XSQVDGACSIM------VMGTEPI--QTHTMKLLGSIYGVPVVILVDSG 126
            ++ D     M      V G      Q  TMKL G + G  +++L+DSG
Sbjct: 413 AAEEDTESDEMECKGLGVFGVSSTSSQVRTMKLEGVLQGANILVLIDSG 461