Miyakogusa Predicted Gene

Lj0g3v0068089.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0068089.1 tr|A2Q457|A2Q457_MEDTR Peptidase aspartic, active
site OS=Medicago truncatula
GN=MtrDRAFT_AC155896g2,39.13,0.000000000000003,coiled-coil,NULL;
seg,NULL,CUFF.3236.1
         (126 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g464050.1 | LRR and NB-ARC domain disease resistance prote...    69   1e-12
Medtr3g448640.1 | hypothetical protein | HC | chr3:16356322-1635...    60   6e-10

>Medtr6g464050.1 | LRR and NB-ARC domain disease resistance protein |
            LC | chr6:22290131-22281147 | 20130731
          Length = 2340

 Score = 68.9 bits (167), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 5/102 (4%)

Query: 25   DRGVRHLPYQELLDRRQKGLCFKCGGKYHPLHQCPDRQLKIMVLDXXXXXXXXXXXXXXX 84
            +RGV+HL Y +L+ R+ KGLCF CG +Y PLHQC ++QL+   ++               
Sbjct: 2200 NRGVKHLTYSDLIHRKTKGLCFCCGERYTPLHQCAEKQLRTFAMELQKGEEEITVGLNSM 2259

Query: 85   XXSQVDGACSIMVMGTEPIQTHTMKLLGSIYGVPVVILVDSG 126
              S + G   +      P+      L GS+ G+ + ILVD+G
Sbjct: 2260 MLSGLVGGNRVQNALPSPLH-----LAGSVKGMYLTILVDTG 2296


>Medtr3g448640.1 | hypothetical protein | HC |
           chr3:16356322-16356879 | 20130731
          Length = 185

 Score = 59.7 bits (143), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 10/100 (10%)

Query: 36  LLDRRQKGLCFKCGGKYHP-LHQCPDRQLKIMVLDXXXX-------XXXXXXXXXXXXXS 87
           + +RR KGLCFKCGGKYHP LH+CP++ L++++L                          
Sbjct: 1   MAERRAKGLCFKCGGKYHPTLHKCPEKSLRVLILGEGEGVNEEGEIVSLETQEVLEEEEE 60

Query: 88  QVDGACSIM-VMGTEPIQTHTMKLLGSIYGVPVVILVDSG 126
           +++  C ++ V+G+   + +TMK+ G +  + VV+LVDSG
Sbjct: 61  EIESECKVIGVLGSMG-EYNTMKIGGKLENIDVVVLVDSG 99