Miyakogusa Predicted Gene

Lj0g3v0066399.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0066399.1 Non Characterized Hit- tr|C6TI18|C6TI18_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.55406
PE,82.69,0,seg,NULL; DUF4057,Domain of unknown function DUF4057;
SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NUL,CUFF.3127.1
         (283 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g074260.1 | plant/F14D7-9 protein | HC | chr3:33554888-335...   435   e-122
Medtr3g074260.3 | plant/F14D7-9 protein | HC | chr3:33555756-335...   340   9e-94
Medtr3g074260.4 | plant/F14D7-9 protein | HC | chr3:33554897-335...   318   3e-87
Medtr3g074260.2 | plant/F14D7-9 protein | HC | chr3:33554897-335...   318   3e-87
Medtr3g087250.1 | HN1-like protein | HC | chr3:39556849-39552904...   285   4e-77
Medtr0276s0040.1 | DUF4057 family protein | HC | scaffold0276:14...   201   7e-52
Medtr3g036400.1 | DUF4057 family protein | HC | chr3:13519121-13...    90   2e-18
Medtr7g008860.1 | DUF4057 family protein | HC | chr7:1845117-184...    82   4e-16

>Medtr3g074260.1 | plant/F14D7-9 protein | HC |
           chr3:33554888-33558038 | 20130731
          Length = 288

 Score =  435 bits (1118), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 226/291 (77%), Positives = 242/291 (83%), Gaps = 11/291 (3%)

Query: 1   MERSTPVRKPHTSTADLLTWSETXXXXXXXXXXXXXXXXXXXDGIRKVVFGGQVTDEEVE 60
           MER+TPVRKPHTSTADLL WSET                   DGI KVVFGGQVTDEEVE
Sbjct: 1   MERNTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSHQPSDGISKVVFGGQVTDEEVE 60

Query: 61  SLNKRKPCSESKMKEITGSGIFVANGEDDTAEDGSANPQ-NKTGIRMYQQAVAGISHISF 119
           SLNKRKPCSE KMKEITGSGIFVANGED+  EDGSANP  NKTGIRMYQQA+AGISHISF
Sbjct: 61  SLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISF 120

Query: 120 GEEGSLLPKKPSSLPEVAKQRELSGTLESEDHKLNKQLSDAKCKELSGHDIFAPPPEIKP 179
           GEE S+ PKKP+SLPEVAKQRELSGT+ESED+KLNKQLSDAKCKELSGHDIFAPPPEIKP
Sbjct: 121 GEEESVSPKKPASLPEVAKQRELSGTMESEDNKLNKQLSDAKCKELSGHDIFAPPPEIKP 180

Query: 180 RPITARVLELKGSIDIGELAPSQADG--DGTT-----KTAKKIYKEKFADLSGNDIFRGE 232
           RPIT R+LELKGSI +GE   S  DG  D TT     KTAKKI  +KFA+LSGN+IF+G+
Sbjct: 181 RPITPRILELKGSIGLGE---SHGDGDQDATTGEPVLKTAKKILNQKFAELSGNNIFKGD 237

Query: 233 VPPSSTEKSLSGAKLREISGSNIFADGKVESRDFLGGVRKPPGGESSIALV 283
            PP + EKSLSGAKLREISGSNIFADGK ESRD+LGGVRKPPGGESSIALV
Sbjct: 238 SPPLAAEKSLSGAKLREISGSNIFADGKAESRDYLGGVRKPPGGESSIALV 288


>Medtr3g074260.3 | plant/F14D7-9 protein | HC |
           chr3:33555756-33557997 | 20130731
          Length = 216

 Score =  340 bits (872), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 177/219 (80%), Positives = 192/219 (87%), Gaps = 11/219 (5%)

Query: 73  MKEITGSGIFVANGEDDTAEDGSANPQ-NKTGIRMYQQAVAGISHISFGEEGSLLPKKPS 131
           MKEITGSGIFVANGED+  EDGSANP  NKTGIRMYQQA+AGISHISFGEE S+ PKKP+
Sbjct: 1   MKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISFGEEESVSPKKPA 60

Query: 132 SLPEVAKQRELSGTLESEDHKLNKQLSDAKCKELSGHDIFAPPPEIKPRPITARVLELKG 191
           SLPEVAKQRELSGT+ESED+KLNKQLSDAKCKELSGHDIFAPPPEIKPRPIT R+LELKG
Sbjct: 61  SLPEVAKQRELSGTMESEDNKLNKQLSDAKCKELSGHDIFAPPPEIKPRPITPRILELKG 120

Query: 192 SIDIGELAPSQADG--DGTT-----KTAKKIYKEKFADLSGNDIFRGEVPPSSTEKSLSG 244
           SI +GE   S  DG  D TT     KTAKKI  +KFA+LSGN+IF+G+ PP + EKSLSG
Sbjct: 121 SIGLGE---SHGDGDQDATTGEPVLKTAKKILNQKFAELSGNNIFKGDSPPLAAEKSLSG 177

Query: 245 AKLREISGSNIFADGKVESRDFLGGVRKPPGGESSIALV 283
           AKLREISGSNIFADGK ESRD+LGGVRKPPGGESSIALV
Sbjct: 178 AKLREISGSNIFADGKAESRDYLGGVRKPPGGESSIALV 216


>Medtr3g074260.4 | plant/F14D7-9 protein | HC |
           chr3:33554897-33557511 | 20130731
          Length = 207

 Score =  318 bits (816), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 159/198 (80%), Positives = 168/198 (84%), Gaps = 1/198 (0%)

Query: 1   MERSTPVRKPHTSTADLLTWSETXXXXXXXXXXXXXXXXXXXDGIRKVVFGGQVTDEEVE 60
           MER+TPVRKPHTSTADLL WSET                   DGI KVVFGGQVTDEEVE
Sbjct: 1   MERNTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSHQPSDGISKVVFGGQVTDEEVE 60

Query: 61  SLNKRKPCSESKMKEITGSGIFVANGEDDTAEDGSANPQ-NKTGIRMYQQAVAGISHISF 119
           SLNKRKPCSE KMKEITGSGIFVANGED+  EDGSANP  NKTGIRMYQQA+AGISHISF
Sbjct: 61  SLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISF 120

Query: 120 GEEGSLLPKKPSSLPEVAKQRELSGTLESEDHKLNKQLSDAKCKELSGHDIFAPPPEIKP 179
           GEE S+ PKKP+SLPEVAKQRELSGT+ESED+KLNKQLSDAKCKELSGHDIFAPPPEIKP
Sbjct: 121 GEEESVSPKKPASLPEVAKQRELSGTMESEDNKLNKQLSDAKCKELSGHDIFAPPPEIKP 180

Query: 180 RPITARVLELKGSIDIGE 197
           RPIT R+LELKGSI +GE
Sbjct: 181 RPITPRILELKGSIGLGE 198


>Medtr3g074260.2 | plant/F14D7-9 protein | HC |
           chr3:33554897-33557997 | 20130731
          Length = 207

 Score =  318 bits (816), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 159/198 (80%), Positives = 168/198 (84%), Gaps = 1/198 (0%)

Query: 1   MERSTPVRKPHTSTADLLTWSETXXXXXXXXXXXXXXXXXXXDGIRKVVFGGQVTDEEVE 60
           MER+TPVRKPHTSTADLL WSET                   DGI KVVFGGQVTDEEVE
Sbjct: 1   MERNTPVRKPHTSTADLLVWSETPINDSPAPPSSNTRSHQPSDGISKVVFGGQVTDEEVE 60

Query: 61  SLNKRKPCSESKMKEITGSGIFVANGEDDTAEDGSANPQ-NKTGIRMYQQAVAGISHISF 119
           SLNKRKPCSE KMKEITGSGIFVANGED+  EDGSANP  NKTGIRMYQQA+AGISHISF
Sbjct: 61  SLNKRKPCSEYKMKEITGSGIFVANGEDEAPEDGSANPSANKTGIRMYQQAIAGISHISF 120

Query: 120 GEEGSLLPKKPSSLPEVAKQRELSGTLESEDHKLNKQLSDAKCKELSGHDIFAPPPEIKP 179
           GEE S+ PKKP+SLPEVAKQRELSGT+ESED+KLNKQLSDAKCKELSGHDIFAPPPEIKP
Sbjct: 121 GEEESVSPKKPASLPEVAKQRELSGTMESEDNKLNKQLSDAKCKELSGHDIFAPPPEIKP 180

Query: 180 RPITARVLELKGSIDIGE 197
           RPIT R+LELKGSI +GE
Sbjct: 181 RPITPRILELKGSIGLGE 198


>Medtr3g087250.1 | HN1-like protein | HC | chr3:39556849-39552904 |
           20130731
          Length = 299

 Score =  285 bits (728), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 165/300 (55%), Positives = 205/300 (68%), Gaps = 23/300 (7%)

Query: 4   STPVRKPHTSTADLLTWSETXXXXXXXXXXXXXXXXXXXDGIRKVVFGGQVTDEEVESLN 63
           STPVRK HT+T+DLLTWSE                    D I KV+   Q+T+EE +SL+
Sbjct: 3   STPVRKTHTNTSDLLTWSEVPPPPVVIDSSATRSRQPS-DRISKVLNSDQLTEEEAQSLS 61

Query: 64  KRKPCSESKMKEITGSGIFVANGEDDTAEDGSANPQNKTGIRMYQQAVAGISHISFGEEG 123
           K KPCS  KMKE++G GIF  NGED  +E GS N  +KT IR+YQQA+ G+S ISF  E 
Sbjct: 62  KSKPCSGYKMKEMSGHGIFSDNGEDSASEAGSVN--SKTSIRIYQQAINGVSQISFSTEE 119

Query: 124 SLLPKKPSSLPEVAKQRELSGTLESE-DHKLNKQLSDAKCKELSGHDIFAPPPEIKPRPI 182
           S+ PKKP+S+PEVAKQRELSGTL+++ D K  KQ+S+AK KEL+G+DIF PPPEI PR +
Sbjct: 120 SVSPKKPTSIPEVAKQRELSGTLQTDLDAKTQKQISNAKTKELTGNDIFGPPPEIVPRSM 179

Query: 183 TA-RVLELKGSIDIGELAPS--------------QAD---GDG-TTKTAKKIYKEKFADL 223
            A R LE K S D+GE  P               Q++   GD    KT+KKI+ +KFA+L
Sbjct: 180 AAARTLESKESKDMGEPLPRNLRTSVKVSNPAGGQSNILFGDAPVEKTSKKIHDQKFAEL 239

Query: 224 SGNDIFRGEVPPSSTEKSLSGAKLREISGSNIFADGKVESRDFLGGVRKPPGGESSIALV 283
           SGN+IF G+VP  S EKSLS AKLREI+GS+IFADGK E +D + G RKPPGG+SSIAL+
Sbjct: 240 SGNNIFHGDVPAGSAEKSLSRAKLREITGSDIFADGKPEIKDPVKGARKPPGGDSSIALL 299


>Medtr0276s0040.1 | DUF4057 family protein | HC |
           scaffold0276:14403-17236 | 20130731
          Length = 348

 Score =  201 bits (511), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 134/304 (44%), Positives = 175/304 (57%), Gaps = 41/304 (13%)

Query: 6   PVRKPHTSTADLLTWSETXXXXXXXXXXXXXXXXXXXDGIRKVVFGGQVTDEEVESLNKR 65
           P R   T T  +LTW E                    D I  V+ G +V++ E ++L K 
Sbjct: 4   PTRNSQTCTNGILTWPENSSPVAAVTGHRSHQPS---DDIGDVLRGKKVSENEAQNLAKW 60

Query: 66  KPCS-ESKMKEITGSGIFVANGEDDTAEDGSANPQN---------------KTGIRMYQQ 109
           KP S  S+MKE TGSGI  AN ED  ++  +AN ++                TGIR+YQQ
Sbjct: 61  KPSSGYSRMKEATGSGIVSANAEDTASKANAANSKHSGIFSTNAEDATSEANTGIRVYQQ 120

Query: 110 AVAGISHISF--GEEGSLLPKKPSSLPEVAKQRELSGTLESEDHKLNKQL-SDAKCKELS 166
           A+ GIS ISF  GEE  + PKKP+SLPE AKQREL GTL++E    +K+L S +K KE+ 
Sbjct: 121 AMNGISQISFNNGEE-IISPKKPTSLPEAAKQRELGGTLQNEPGTNSKKLMSSSKTKEIG 179

Query: 167 GHDIFAPPPEIKPRPITA---------RVLELKGSIDIGELAPSQADGDGTTKTAKKIYK 217
           G+DIF  PPEI PR + A         +   ++  +  GE        +   KT++KI+ 
Sbjct: 180 GNDIFGIPPEIVPRSLAAVHTPDSKVYKAAGVRSKVVSGE--------ESAQKTSRKIHD 231

Query: 218 EKFADLSGNDIFRGEVPPSSTEKSLSG-AKLREISGSNIFADGKVESRDFLGGVRKPPGG 276
           +KFADL+GNDIF+G+V P S EK  S  AKLRE++GSNIFADGK E+RD L G RK  GG
Sbjct: 232 QKFADLTGNDIFKGDVTPGSVEKPTSMVAKLREMAGSNIFADGKAENRDRLLGNRKHAGG 291

Query: 277 ESSI 280
            S+I
Sbjct: 292 GSNI 295


>Medtr3g036400.1 | DUF4057 family protein | HC |
           chr3:13519121-13518799 | 20130731
          Length = 66

 Score = 90.1 bits (222), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 45/62 (72%), Positives = 51/62 (82%), Gaps = 1/62 (1%)

Query: 73  MKEITGSGIFVANGEDDTAEDGSAN-PQNKTGIRMYQQAVAGISHISFGEEGSLLPKKPS 131
           MKEI GSGI VANGED+ ++DG AN   NKTGI MYQQ +AGISHISFGEE S+ PKKP+
Sbjct: 1   MKEIIGSGILVANGEDEASKDGGANRSANKTGICMYQQTIAGISHISFGEEESVSPKKPA 60

Query: 132 SL 133
           SL
Sbjct: 61  SL 62


>Medtr7g008860.1 | DUF4057 family protein | HC |
           chr7:1845117-1844807 | 20130731
          Length = 62

 Score = 82.4 bits (202), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 42/51 (82%), Positives = 46/51 (90%), Gaps = 1/51 (1%)

Query: 73  MKEITGSGIFVANGEDDTAEDGSANPQ-NKTGIRMYQQAVAGISHISFGEE 122
           MKEITGSGIFVANGED+ +EDGSANP  NK GI MY+QA+AGISHISFGEE
Sbjct: 1   MKEITGSGIFVANGEDEASEDGSANPSTNKIGICMYEQAIAGISHISFGEE 51