Miyakogusa Predicted Gene

Lj0g3v0064569.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0064569.1 Non Chatacterized Hit- tr|H3HU78|H3HU78_STRPU
Uncharacterized protein OS=Strongylocentrotus
purpurat,38.81,0.000001,FAD/NAD(P)-binding domain,NULL; no
description,NULL; seg,NULL; PHYTOENE DEHYDROGENASE,NULL,CUFF.2973.1
         (276 letters)

Database: TAIR10_pep 
           35,386 sequences; 14,482,855 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...   417   e-117
AT1G57770.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase fami...    55   4e-08

>AT5G49555.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr5:20107411-20110602 REVERSE LENGTH=556
          Length = 556

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 192/276 (69%), Positives = 228/276 (82%)

Query: 1   MQADVLKATLASDAVIGSTASVHAPGSGYVLLHHVMGESDGDRGVWSFVEXXXXXXXXXX 60
            ++DVLKA+LA+DAVIGSTASVH PGSGYVLLHHVMGE+DG++G+WS+VE          
Sbjct: 211 FESDVLKASLATDAVIGSTASVHTPGSGYVLLHHVMGETDGEKGIWSYVEGGMGSVSMAI 270

Query: 61  XXXXXXXXXHVVTNAEVSQLLIENSSTVRGVILADGTEVHSSVVLSNATPYKTFMELVPS 120
                     + TNAEVS++L E+SS V+GV+LADGT V SS +LSNATPY+T++ELVP+
Sbjct: 271 ANAAKEAGAEIFTNAEVSEILTEDSSIVKGVLLADGTRVESSAILSNATPYRTYVELVPT 330

Query: 121 NVLPDDFVRAIKHSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEE 180
           NVLP++FV AIK+SDYSSATTKIN+AVDKLPQFQCC  NH   GP+H G+I IG ESM+E
Sbjct: 331 NVLPENFVSAIKNSDYSSATTKINLAVDKLPQFQCCNTNHSGPGPEHFGTIHIGAESMDE 390

Query: 181 IHSACQDAMNGVPSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDY 240
           +HSAC D+ NG+PSRRP IEMTIPS LD TISPPGKHVINLF+QYTPYKP DG W+D  Y
Sbjct: 391 VHSACHDSENGLPSRRPVIEMTIPSTLDNTISPPGKHVINLFIQYTPYKPSDGSWEDPTY 450

Query: 241 RESFAQKCFTLVDEYAPGFSSSILGYDMLTPPDLER 276
           RE+FAQ+CF L+DEYAPGFSSSI+ YDMLTPPDLER
Sbjct: 451 REAFAQRCFKLIDEYAPGFSSSIISYDMLTPPDLER 486


>AT1G57770.1 | Symbols:  | FAD/NAD(P)-binding oxidoreductase family
           protein | chr1:21395254-21398135 FORWARD LENGTH=574
          Length = 574

 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 28/171 (16%)

Query: 74  NAEVSQLLIENSSTVRGVILADGTEVHS-SVVLSNATPYKTFMELVPSNVLPDDFVRAIK 132
            + V  ++IEN   V GV L +G  V +   V+SNA+ + T ++L+P   LP+ +V+ + 
Sbjct: 316 KSHVENIVIENGKAV-GVKLRNGQFVRARKAVVSNASMWDT-LKLLPPGALPESYVKGVN 373

Query: 133 HSDYSSATTKINIAVDKLPQFQCCKLNHPHDGPQHVGSIRIGFESMEEIHSACQDAMNGV 192
            +                   QC    H H G    G      + +E  H    D   GV
Sbjct: 374 TTP------------------QCESFMHLHLGFDAEGIA----DDLEIHHIVVNDWDRGV 411

Query: 193 PSRRPFIEMTIPSVLDKTISPPGKHVINLFVQYTPYKPLDGDWQDHDYRES 243
            + +  + +++PSVL   ++PPGKHV++    Y P     G W+  D R +
Sbjct: 412 DADQNVVLISVPSVLSPNLAPPGKHVLH---AYCPGTEPFGLWEGLDRRSA 459